RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 CCR6P51684 374 aa8.09□□□□□ -1.11
SDF2-208ENST00000589788 CRIP2P52943 208 aaPredicted RBP8.09□□□□□ -1.11
SDF2-208ENST00000589788 UBE2KP61086 200 aa8.09□□□□□ -1.11
SDF2-208ENST00000589788 RPL30P62888 115 aaKnown RBP8.09□□□□□ -1.11
SDF2-208ENST00000589788 CATR1Q13166 79 aa8.09□□□□□ -1.11
SDF2-208ENST00000589788 OXA1LQ15070 435 aa8.09□□□□□ -1.11
SDF2-208ENST00000589788 SCGB2B2Q4G0G5 96 aa8.09□□□□□ -1.11
SDF2-208ENST00000589788 AADACL3Q5VUY0 350 aa8.09□□□□□ -1.11
SDF2-208ENST00000589788 ZNF66Q6ZN08 573 aa8.09□□□□□ -1.11
SDF2-208ENST00000589788 C18orf65Q6ZTR6 163 aa8.09□□□□□ -1.11
SDF2-208ENST00000589788 TEX45Q8NA69 505 aa8.09□□□□□ -1.11
SDF2-208ENST00000589788 ZBTB34Q8NCN2 500 aa8.09□□□□□ -1.11
SDF2-208ENST00000589788 OR13C8Q8NGS7 320 aa8.09□□□□□ -1.11
SDF2-208ENST00000589788 MOB3AQ96BX8 217 aa8.09□□□□□ -1.11
SDF2-208ENST00000589788 SLC25A21Q9BQT8 299 aaPredicted RBP8.09□□□□□ -1.11
SDF2-208ENST00000589788 ZNF2Q9BSG1 426 aaPredicted RBP8.09□□□□□ -1.11
SDF2-208ENST00000589788 FAM103A1Q9BTL3 118 aaKnown RBP8.09□□□□□ -1.11
SDF2-208ENST00000589788 NOTCH1P46531 2555 aa8.09□□□□□ -1.12
SDF2-208ENST00000589788 SRRM4A7MD48 611 aaKnown RBP8.08□□□□□ -1.12
SDF2-208ENST00000589788 G3V4G9 280 aa8.08□□□□□ -1.12
SDF2-208ENST00000589788 TNFSF12O43508 249 aa8.08□□□□□ -1.12
SDF2-208ENST00000589788 CREBL2O60519 120 aaPredicted RBP8.08□□□□□ -1.12
SDF2-208ENST00000589788 ACTL6BO94805 426 aa8.08□□□□□ -1.12
SDF2-208ENST00000589788 PLA2G1BP04054 148 aaKnown RBP8.08□□□□□ -1.12
SDF2-208ENST00000589788 TCRBP04435 133 aa8.08□□□□□ -1.12
SDF2-208ENST00000589788 CRYGBP07316 175 aa8.08□□□□□ -1.12
SDF2-208ENST00000589788 KIR2DS2P43631 304 aa8.08□□□□□ -1.12
SDF2-208ENST00000589788 UCP3P55916 312 aa8.08□□□□□ -1.12
SDF2-208ENST00000589788 RAB25P57735 213 aa8.08□□□□□ -1.12
SDF2-208ENST00000589788 PJVKQ0ZLH3 352 aa8.08□□□□□ -1.12
SDF2-208ENST00000589788 EIF4EBP1Q13541 118 aaPredicted RBP8.08□□□□□ -1.12
SDF2-208ENST00000589788 SURF2Q15527 256 aaPredicted RBP8.08□□□□□ -1.12
SDF2-208ENST00000589788 MLANAQ16655 118 aa8.08□□□□□ -1.12
SDF2-208ENST00000589788 TRIM16LQ309B1 348 aa8.08□□□□□ -1.12
SDF2-208ENST00000589788 AKIRIN2Q53H80 203 aa8.08□□□□□ -1.12
SDF2-208ENST00000589788 LFNGQ8NES3 379 aa8.08□□□□□ -1.12
SDF2-208ENST00000589788 OR5M8Q8NGP6 311 aa8.08□□□□□ -1.12
SDF2-208ENST00000589788 C4orf3Q8WVX3 66 aa8.08□□□□□ -1.12
SDF2-208ENST00000589788 MRGPRFQ96AM1 343 aa8.08□□□□□ -1.12
SDF2-208ENST00000589788 UBE2E2Q96LR5 201 aa8.08□□□□□ -1.12
SDF2-208ENST00000589788 GPHA2Q96T91 129 aa8.08□□□□□ -1.12
SDF2-208ENST00000589788 PHB2Q99623 299 aa8.08□□□□□ -1.12
SDF2-208ENST00000589788 FXYD6Q9H0Q3 95 aa8.08□□□□□ -1.12
SDF2-208ENST00000589788 KLK15Q9H2R5 256 aa8.08□□□□□ -1.12
SDF2-208ENST00000589788 VSIG4Q9Y279 399 aa8.08□□□□□ -1.12
SDF2-208ENST00000589788 NUBP2Q9Y5Y2 271 aa8.08□□□□□ -1.12
SDF2-208ENST00000589788 NOTCH3Q9UM47 2321 aa8.08□□□□□ -1.12
SDF2-208ENST00000589788 CCL24O00175 119 aa8.07□□□□□ -1.12
SDF2-208ENST00000589788 ARPC1BO15143 372 aaKnown RBP8.07□□□□□ -1.12
SDF2-208ENST00000589788 HRASP01112 189 aa8.07□□□□□ -1.12
SDF2-208ENST00000589788 SAA1P0DJI8 122 aaPredicted RBP8.07□□□□□ -1.12
SDF2-208ENST00000589788 EGR2P11161 476 aaPredicted RBP8.07□□□□□ -1.12
SDF2-208ENST00000589788 IGLL1P15814 213 aa8.07□□□□□ -1.12
SDF2-208ENST00000589788 RAB9AP51151 201 aa8.07□□□□□ -1.12
SDF2-208ENST00000589788 TNXAQ16473 311 aa8.07□□□□□ -1.12
SDF2-208ENST00000589788 PRSS8Q16651 343 aa8.07□□□□□ -1.12
SDF2-208ENST00000589788 DEFB136Q30KP8 78 aa8.07□□□□□ -1.12
SDF2-208ENST00000589788 C19orf54Q5BKX5 351 aa8.07□□□□□ -1.12
SDF2-208ENST00000589788 PLET1Q6UQ28 207 aa8.07□□□□□ -1.12
SDF2-208ENST00000589788 ZNF818PQ6ZRF7 136 aa8.07□□□□□ -1.12
SDF2-208ENST00000589788 SPAG16Q8N0X2 631 aa8.07□□□□□ -1.12
SDF2-208ENST00000589788 CENPSQ8N2Z9 138 aa8.07□□□□□ -1.12
SDF2-208ENST00000589788 WFDC9Q8NEX5 89 aa8.07□□□□□ -1.12
SDF2-208ENST00000589788 VSTM2AQ8TAG5 236 aa8.07□□□□□ -1.12
SDF2-208ENST00000589788 MYOZ3Q8TDC0 251 aa8.07□□□□□ -1.12
SDF2-208ENST00000589788 SCGB3A2Q96PL1 93 aa8.07□□□□□ -1.12
SDF2-208ENST00000589788 DUX3Q96PT4 197 aa8.07□□□□□ -1.12
SDF2-208ENST00000589788 AIFM2Q9BRQ8 373 aa8.07□□□□□ -1.12
SDF2-208ENST00000589788 C20orf85Q9H1P6 137 aa8.07□□□□□ -1.12
SDF2-208ENST00000589788 ZNF355PQ9NSJ1 428 aa8.07□□□□□ -1.12
SDF2-208ENST00000589788 NUDT15Q9NV35 164 aa8.07□□□□□ -1.12
SDF2-208ENST00000589788 MPPED1O15442 326 aa8.06□□□□□ -1.12
SDF2-208ENST00000589788 SOX15O60248 233 aa8.06□□□□□ -1.12
SDF2-208ENST00000589788 DUS4LO95620 317 aaKnown RBP8.06□□□□□ -1.12
SDF2-208ENST00000589788 SPNP16150 400 aa8.06□□□□□ -1.12
SDF2-208ENST00000589788 S100GP29377 79 aa8.06□□□□□ -1.12
SDF2-208ENST00000589788 TPPP2P59282 170 aa8.06□□□□□ -1.12
SDF2-208ENST00000589788 LPCAT3Q6P1A2 487 aa8.06□□□□□ -1.12
SDF2-208ENST00000589788 MMD2Q8IY49 270 aa8.06□□□□□ -1.12
SDF2-208ENST00000589788 CMTM1Q8IZ96 169 aa8.06□□□□□ -1.12
SDF2-208ENST00000589788 SLC38A6Q8IZM9 456 aa8.06□□□□□ -1.12
SDF2-208ENST00000589788 ZNF491Q8N8L2 437 aa8.06□□□□□ -1.12
SDF2-208ENST00000589788 OR5T1Q8NG75 326 aa8.06□□□□□ -1.12
SDF2-208ENST00000589788 OR51H1Q8NH63 302 aa8.06□□□□□ -1.12
SDF2-208ENST00000589788 MARCH1Q8TCQ1 289 aa8.06□□□□□ -1.12
SDF2-208ENST00000589788 CASTOR1Q8WTX7 329 aa8.06□□□□□ -1.12
SDF2-208ENST00000589788 TMEM68Q96MH6 324 aa8.06□□□□□ -1.12
SDF2-208ENST00000589788 MS4A10Q96PG2 267 aa8.06□□□□□ -1.12
SDF2-208ENST00000589788 OR5B12Q96R08 314 aa8.06□□□□□ -1.12
SDF2-208ENST00000589788 P2RX4Q99571 388 aa8.06□□□□□ -1.12
SDF2-208ENST00000589788 MARVELD1Q9BSK0 173 aa8.06□□□□□ -1.12
SDF2-208ENST00000589788 SLA2Q9H6Q3 261 aa8.06□□□□□ -1.12
SDF2-208ENST00000589788 ZNF430Q9H8G1 570 aaPredicted RBP8.06□□□□□ -1.12
SDF2-208ENST00000589788 GPR132Q9UNW8 380 aa8.06□□□□□ -1.12
SDF2-208ENST00000589788 MSGN1A6NI15 193 aa8.05□□□□□ -1.12
SDF2-208ENST00000589788 RBFOX2O43251 390 aaKnown RBP eCLIP8.05□□□□□ -1.12
SDF2-208ENST00000589788 OR2A4O95047 310 aa8.05□□□□□ -1.12
SDF2-208ENST00000589788 TRGV3P03979 118 aa8.05□□□□□ -1.12
SDF2-208ENST00000589788 CTSDP07339 412 aaPredicted RBP8.05□□□□□ -1.12
SDF2-208ENST00000589788 GNRHRP30968 328 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms