RNA–Protein interactions for RNA: ENST00000588937.5

MBD1-217, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 1,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-217ENST00000588937 DOCK11Q5JSL3 2073 aa12.48□□□□□ -0.41
MBD1-217ENST00000588937 ICE1Q9Y2F5 2266 aa12.48□□□□□ -0.41
MBD1-217ENST00000588937 PCNX1Q96RV3 2341 aa12.48□□□□□ -0.41
MBD1-217ENST00000588937 TRBV23-1A0A0A0MS06 115 aa12.48□□□□□ -0.41
MBD1-217ENST00000588937 B4DEV8 164 aa12.48□□□□□ -0.41
MBD1-217ENST00000588937 PRSS46E5RG02 174 aa12.48□□□□□ -0.41
MBD1-217ENST00000588937 FSTL3O95633 263 aa12.48□□□□□ -0.41
MBD1-217ENST00000588937 OPRK1P41145 380 aa12.48□□□□□ -0.41
MBD1-217ENST00000588937 PNRC1Q12796 327 aaPredicted RBP12.48□□□□□ -0.41
MBD1-217ENST00000588937 MUC15Q8N387 334 aa12.48□□□□□ -0.41
MBD1-217ENST00000588937 CA5BP1Q8WTZ4 195 aa12.48□□□□□ -0.41
MBD1-217ENST00000588937 SLC25A22Q9H936 323 aa12.48□□□□□ -0.41
MBD1-217ENST00000588937 PLEKHA3Q9HB20 300 aa12.48□□□□□ -0.41
MBD1-217ENST00000588937 NPVFQ9HCQ7 196 aa12.48□□□□□ -0.41
MBD1-217ENST00000588937 CTSZQ9UBR2 303 aa12.48□□□□□ -0.41
MBD1-217ENST00000588937 FNDC10F2Z333 226 aa12.47□□□□□ -0.41
MBD1-217ENST00000588937 J3QR06 171 aa12.47□□□□□ -0.41
MBD1-217ENST00000588937 FCN3O75636 299 aa12.47□□□□□ -0.41
MBD1-217ENST00000588937 KBTBD11O94819 623 aa12.47□□□□□ -0.41
MBD1-217ENST00000588937 LOXP28300 417 aaPredicted RBP12.47□□□□□ -0.41
MBD1-217ENST00000588937 PRCDQ00LT1 54 aa12.47□□□□□ -0.41
MBD1-217ENST00000588937 LY6DQ14210 128 aa12.47□□□□□ -0.41
MBD1-217ENST00000588937 HIST1H2BAQ96A08 127 aa12.47□□□□□ -0.41
MBD1-217ENST00000588937 NEIL1Q96FI4 390 aaPredicted RBP12.47□□□□□ -0.41
MBD1-217ENST00000588937 A0A087X0M5 115 aa12.46□□□□□ -0.41
MBD1-217ENST00000588937 A0A1B0GX30 115 aa12.46□□□□□ -0.41
MBD1-217ENST00000588937 SEC14L6B5MCN3 397 aa12.46□□□□□ -0.41
MBD1-217ENST00000588937 OR2C1O95371 312 aa12.46□□□□□ -0.41
MBD1-217ENST00000588937 CDC34P49427 236 aaPredicted RBP12.46□□□□□ -0.41
MBD1-217ENST00000588937 RAB5BP61020 215 aa12.46□□□□□ -0.41
MBD1-217ENST00000588937 MEF2BQ02080 365 aaPredicted RBP12.46□□□□□ -0.41
MBD1-217ENST00000588937 RAB31Q13636 194 aa12.46□□□□□ -0.41
MBD1-217ENST00000588937 ZNF672Q499Z4 452 aaPredicted RBP12.46□□□□□ -0.41
MBD1-217ENST00000588937 TMEM155Q4W5P6 130 aa12.46□□□□□ -0.41
MBD1-217ENST00000588937 FAM90A2PQ658T7 463 aa12.46□□□□□ -0.41
MBD1-217ENST00000588937 TREML4Q6UXN2 200 aa12.46□□□□□ -0.41
MBD1-217ENST00000588937 OR5AN1Q8NGI8 311 aa12.46□□□□□ -0.41
MBD1-217ENST00000588937 OR5B3Q8NH48 314 aa12.46□□□□□ -0.41
MBD1-217ENST00000588937 RAB1CQ92928 201 aa12.46□□□□□ -0.41
MBD1-217ENST00000588937 RAB24Q969Q5 203 aa12.46□□□□□ -0.41
MBD1-217ENST00000588937 MRPL20Q9BYC9 149 aaKnown RBP12.46□□□□□ -0.41
MBD1-217ENST00000588937 SIRT7Q9NRC8 400 aa12.46□□□□□ -0.41
MBD1-217ENST00000588937 H0YJW9 148 aa12.46□□□□□ -0.42
MBD1-217ENST00000588937 PLAUP00749 431 aa12.46□□□□□ -0.42
MBD1-217ENST00000588937 IGKV1-16P04430 117 aa12.46□□□□□ -0.42
MBD1-217ENST00000588937 IL3RAP26951 378 aa12.46□□□□□ -0.42
MBD1-217ENST00000588937 RAB13P51153 203 aa12.46□□□□□ -0.42
MBD1-217ENST00000588937 ERVFRD-1P60508 538 aa12.46□□□□□ -0.42
MBD1-217ENST00000588937 TMEM249Q2WGJ8 235 aa12.46□□□□□ -0.42
MBD1-217ENST00000588937 TMEM177Q53S58 311 aa12.46□□□□□ -0.42
MBD1-217ENST00000588937 TET2Q6N021 2002 aaPredicted RBP12.46□□□□□ -0.42
MBD1-217ENST00000588937 PDPNQ86YL7 162 aa12.46□□□□□ -0.42
MBD1-217ENST00000588937 Q8N7P7 452 aa12.46□□□□□ -0.42
MBD1-217ENST00000588937 OR4A5Q8NH83 315 aa12.46□□□□□ -0.42
MBD1-217ENST00000588937 OR9G1Q8NH87 305 aa12.46□□□□□ -0.42
MBD1-217ENST00000588937 VSTM2AQ8TAG5 236 aa12.46□□□□□ -0.42
MBD1-217ENST00000588937 FLYWCH2Q96CP2 140 aaKnown RBP12.46□□□□□ -0.42
MBD1-217ENST00000588937 PCGF1Q9BSM1 259 aa12.46□□□□□ -0.42
MBD1-217ENST00000588937 A0A1W2PPE2 198 aa12.45□□□□□ -0.42
MBD1-217ENST00000588937 A0A1W2PPH5 198 aa12.45□□□□□ -0.42
MBD1-217ENST00000588937 A0A1W2PPV4 95 aa12.45□□□□□ -0.42
MBD1-217ENST00000588937 CXorf65A6NEN9 183 aa12.45□□□□□ -0.42
MBD1-217ENST00000588937 C1orf196B1AJZ1 125 aa12.45□□□□□ -0.42
MBD1-217ENST00000588937 MAS1LP35410 378 aa12.45□□□□□ -0.42
MBD1-217ENST00000588937 PPOXP50336 477 aa12.45□□□□□ -0.42
MBD1-217ENST00000588937 DLX6P56179 175 aa12.45□□□□□ -0.42
MBD1-217ENST00000588937 TMEM170AQ8WVE7 144 aa12.45□□□□□ -0.42
MBD1-217ENST00000588937 ISOC2Q96AB3 205 aa12.45□□□□□ -0.42
MBD1-217ENST00000588937 HARBI1Q96MB7 349 aa12.45□□□□□ -0.42
MBD1-217ENST00000588937 HINT2Q9BX68 163 aa12.45□□□□□ -0.42
MBD1-217ENST00000588937 BIN3Q9NQY0 253 aa12.45□□□□□ -0.42
MBD1-217ENST00000588937 ZNRD1Q9P1U0 126 aa12.45□□□□□ -0.42
MBD1-217ENST00000588937 CACNA1BQ00975 2339 aa12.44□□□□□ -0.42
MBD1-217ENST00000588937 SRRM4A7MD48 611 aaKnown RBP12.44□□□□□ -0.42
MBD1-217ENST00000588937 TMEM250H0YL14 139 aa12.44□□□□□ -0.42
MBD1-217ENST00000588937 CA2P00918 260 aa12.44□□□□□ -0.42
MBD1-217ENST00000588937 SAA1P0DJI8 122 aaPredicted RBP12.44□□□□□ -0.42
MBD1-217ENST00000588937 ZNF137PP52743 207 aa12.44□□□□□ -0.42
MBD1-217ENST00000588937 ADORA2A-AS1P86434 159 aa12.44□□□□□ -0.42
MBD1-217ENST00000588937 TEPPQ6URK8 271 aa12.44□□□□□ -0.42
MBD1-217ENST00000588937 OR4C13Q8NGP0 309 aa12.44□□□□□ -0.42
MBD1-217ENST00000588937 TNFRSF14Q92956 283 aa12.44□□□□□ -0.42
MBD1-217ENST00000588937 RALYQ9UKM9 306 aaKnown RBP12.44□□□□□ -0.42
MBD1-217ENST00000588937 TEX50A0A1B0GTY4 177 aa12.43□□□□□ -0.42
MBD1-217ENST00000588937 HMGB3O15347 200 aaKnown RBP12.43□□□□□ -0.42
MBD1-217ENST00000588937 TSPAN9O75954 239 aa12.43□□□□□ -0.42
MBD1-217ENST00000588937 IGHV1-8P0DP01 117 aa12.43□□□□□ -0.42
MBD1-217ENST00000588937 USF1P22415 310 aaPredicted RBP12.43□□□□□ -0.42
MBD1-217ENST00000588937 GRNP28799 593 aaKnown RBP12.43□□□□□ -0.42
MBD1-217ENST00000588937 FAM24BQ8N5W8 94 aa12.43□□□□□ -0.42
MBD1-217ENST00000588937 MGST2Q99735 147 aa12.43□□□□□ -0.42
MBD1-217ENST00000588937 NABP2Q9BQ15 211 aa12.43□□□□□ -0.42
MBD1-217ENST00000588937 GGTLC1Q9BX51 225 aa12.43□□□□□ -0.42
MBD1-217ENST00000588937 PRELID1Q9Y255 219 aa12.43□□□□□ -0.42
MBD1-217ENST00000588937 LSM4Q9Y4Z0 139 aaKnown RBP12.43□□□□□ -0.42
MBD1-217ENST00000588937 PXMP4Q9Y6I8 212 aa12.43□□□□□ -0.42
MBD1-217ENST00000588937 ZNF727A8MUV8 499 aa12.43□□□□□ -0.42
MBD1-217ENST00000588937 RAB5AP20339 215 aa12.43□□□□□ -0.42
MBD1-217ENST00000588937 MC5RP33032 325 aa12.43□□□□□ -0.42
MBD1-217ENST00000588937 CD81P60033 236 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 300.6 ms