RNA–Protein interactions for RNA: ENST00000588274.1

CLPTM1-208, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-208ENST00000588274 MRPS7Q9Y2R9 242 aaKnown RBP10.17□□□□□ -0.78
CLPTM1-208ENST00000588274 PRELID3BQ9Y3B1 194 aa10.17□□□□□ -0.78
CLPTM1-208ENST00000588274 DNAH11Q96DT5 4516 aa10.17□□□□□ -0.78
CLPTM1-208ENST00000588274 IGHV3-35A0A0C4DH35 117 aa10.16□□□□□ -0.78
CLPTM1-208ENST00000588274 F8W735 103 aaPredicted RBP10.16□□□□□ -0.78
CLPTM1-208ENST00000588274 UBE2CO00762 179 aa10.16□□□□□ -0.78
CLPTM1-208ENST00000588274 SSX5O60225 188 aa10.16□□□□□ -0.78
CLPTM1-208ENST00000588274 HSMCR30P0CW71 290 aa10.16□□□□□ -0.78
CLPTM1-208ENST00000588274 HLA-GP17693 338 aa10.16□□□□□ -0.78
CLPTM1-208ENST00000588274 GADD45AP24522 165 aa10.16□□□□□ -0.78
CLPTM1-208ENST00000588274 FCGR2BP31994 310 aaPredicted RBP10.16□□□□□ -0.78
CLPTM1-208ENST00000588274 RPL8P62917 257 aaKnown RBP10.16□□□□□ -0.78
CLPTM1-208ENST00000588274 TIMM50Q3ZCQ8 353 aa10.16□□□□□ -0.78
CLPTM1-208ENST00000588274 ZNF773Q6PK81 442 aa10.16□□□□□ -0.78
CLPTM1-208ENST00000588274 HSD17B10Q99714 261 aaKnown RBP10.16□□□□□ -0.78
CLPTM1-208ENST00000588274 DCUN1D5Q9BTE7 237 aa10.16□□□□□ -0.78
CLPTM1-208ENST00000588274 BET1LQ9NYM9 111 aa10.16□□□□□ -0.78
CLPTM1-208ENST00000588274 KLK5Q9Y337 293 aaPredicted RBP10.16□□□□□ -0.78
CLPTM1-208ENST00000588274 TRAV1-2A0A0B4J238 106 aa10.15□□□□□ -0.78
CLPTM1-208ENST00000588274 TRAV3A0A0B4J244 114 aa10.15□□□□□ -0.78
CLPTM1-208ENST00000588274 HIST1H1BP16401 226 aaKnown RBP10.15□□□□□ -0.78
CLPTM1-208ENST00000588274 MAP2K4P45985 399 aa10.15□□□□□ -0.78
CLPTM1-208ENST00000588274 MFSD4AQ8N468 514 aa10.15□□□□□ -0.78
CLPTM1-208ENST00000588274 NUDCD2Q8WVJ2 157 aa10.15□□□□□ -0.78
CLPTM1-208ENST00000588274 TCTEX1D2Q8WW35 142 aa10.15□□□□□ -0.78
CLPTM1-208ENST00000588274 CXorf58Q96LI9 332 aa10.15□□□□□ -0.78
CLPTM1-208ENST00000588274 MGLLQ99685 303 aa10.15□□□□□ -0.78
CLPTM1-208ENST00000588274 MAP6D1Q9H9H5 199 aa10.15□□□□□ -0.78
CLPTM1-208ENST00000588274 ACOT13Q9NPJ3 140 aa10.15□□□□□ -0.78
CLPTM1-208ENST00000588274 TAS2R8Q9NYW2 309 aa10.15□□□□□ -0.78
CLPTM1-208ENST00000588274 SPATA2Q9UM82 520 aa10.15□□□□□ -0.78
CLPTM1-208ENST00000588274 UFC1Q9Y3C8 167 aa10.15□□□□□ -0.78
CLPTM1-208ENST00000588274 DPPA5A6NC42 116 aa10.14□□□□□ -0.79
CLPTM1-208ENST00000588274 SLC22A5O76082 557 aa10.14□□□□□ -0.79
CLPTM1-208ENST00000588274 DHFRP00374 187 aa10.14□□□□□ -0.79
CLPTM1-208ENST00000588274 PTBP1P26599 531 aaKnown RBP eCLIP10.14□□□□□ -0.79
CLPTM1-208ENST00000588274 PSMD7P51665 324 aa10.14□□□□□ -0.79
CLPTM1-208ENST00000588274 ZNF124Q15973 351 aa10.14□□□□□ -0.79
CLPTM1-208ENST00000588274 POU2AF1Q16633 256 aa10.14□□□□□ -0.79
CLPTM1-208ENST00000588274 HACD4Q5VWC8 232 aa10.14□□□□□ -0.79
CLPTM1-208ENST00000588274 RBPMS2Q6ZRY4 209 aaKnown RBP10.14□□□□□ -0.79
CLPTM1-208ENST00000588274 SSX9Q7RTT3 188 aa10.14□□□□□ -0.79
CLPTM1-208ENST00000588274 CENPOQ9BU64 300 aa10.14□□□□□ -0.79
CLPTM1-208ENST00000588274 DAZ1Q9NQZ3 744 aaKnown RBP10.14□□□□□ -0.79
CLPTM1-208ENST00000588274 PKD1P98161 4303 aa10.13□□□□□ -0.79
CLPTM1-208ENST00000588274 TGOLN2O43493 480 aa10.13□□□□□ -0.79
CLPTM1-208ENST00000588274 CTXN2P0C2S0 81 aa10.13□□□□□ -0.79
CLPTM1-208ENST00000588274 ADMP35318 185 aa10.13□□□□□ -0.79
CLPTM1-208ENST00000588274 MFAP2P55001 183 aa10.13□□□□□ -0.79
CLPTM1-208ENST00000588274 CDNFQ49AH0 187 aa10.13□□□□□ -0.79
CLPTM1-208ENST00000588274 CNIH2Q6PI25 160 aa10.13□□□□□ -0.79
CLPTM1-208ENST00000588274 ZNF66Q6ZN08 573 aa10.13□□□□□ -0.79
CLPTM1-208ENST00000588274 OR4A5Q8NH83 315 aa10.13□□□□□ -0.79
CLPTM1-208ENST00000588274 GATAD1Q8WUU5 269 aa10.13□□□□□ -0.79
CLPTM1-208ENST00000588274 CHRDL1Q9BU40 450 aa10.13□□□□□ -0.79
CLPTM1-208ENST00000588274 DCSTAMPQ9H295 470 aa10.13□□□□□ -0.79
CLPTM1-208ENST00000588274 C11orf68Q9H3H3 251 aaKnown RBP10.13□□□□□ -0.79
CLPTM1-208ENST00000588274 TMEM235A6NFC5 223 aa10.12□□□□□ -0.79
CLPTM1-208ENST00000588274 RGS10O43665 173 aa10.12□□□□□ -0.79
CLPTM1-208ENST00000588274 FGF2P09038 288 aa10.12□□□□□ -0.79
CLPTM1-208ENST00000588274 RPL35AP18077 110 aaKnown RBP10.12□□□□□ -0.79
CLPTM1-208ENST00000588274 CRHBPP24387 322 aa10.12□□□□□ -0.79
CLPTM1-208ENST00000588274 TALDO1P37837 337 aa10.12□□□□□ -0.79
CLPTM1-208ENST00000588274 WT1-ASQ06250 92 aa10.12□□□□□ -0.79
CLPTM1-208ENST00000588274 MSMO1Q15800 293 aa10.12□□□□□ -0.79
CLPTM1-208ENST00000588274 PLET1Q6UQ28 207 aa10.12□□□□□ -0.79
CLPTM1-208ENST00000588274 PRSS48Q7RTY5 328 aa10.12□□□□□ -0.79
CLPTM1-208ENST00000588274 SLC38A6Q8IZM9 456 aa10.12□□□□□ -0.79
CLPTM1-208ENST00000588274 STPG3Q8N7X2 389 aa10.12□□□□□ -0.79
CLPTM1-208ENST00000588274 OR10W1Q8NGF6 305 aa10.12□□□□□ -0.79
CLPTM1-208ENST00000588274 VN1R17PQ8TDU5 208 aa10.12□□□□□ -0.79
CLPTM1-208ENST00000588274 NDUFB11Q9NX14 153 aa10.12□□□□□ -0.79
CLPTM1-208ENST00000588274 SCN3BQ9NY72 215 aa10.12□□□□□ -0.79
CLPTM1-208ENST00000588274 ANXA10Q9UJ72 324 aa10.12□□□□□ -0.79
CLPTM1-208ENST00000588274 OR2T8A6NH00 312 aa10.11□□□□□ -0.79
CLPTM1-208ENST00000588274 UPK2O00526 184 aa10.11□□□□□ -0.79
CLPTM1-208ENST00000588274 PDCD5O14737 125 aa10.11□□□□□ -0.79
CLPTM1-208ENST00000588274 RBFOX2O43251 390 aaKnown RBP eCLIP10.11□□□□□ -0.79
CLPTM1-208ENST00000588274 TNFSF12O43508 249 aa10.11□□□□□ -0.79
CLPTM1-208ENST00000588274 HRASP01112 189 aa10.11□□□□□ -0.79
CLPTM1-208ENST00000588274 PTHLHP12272 177 aa10.11□□□□□ -0.79
CLPTM1-208ENST00000588274 DEFA4P12838 97 aa10.11□□□□□ -0.79
CLPTM1-208ENST00000588274 RPA2P15927 270 aa10.11□□□□□ -0.79
CLPTM1-208ENST00000588274 RAB3BP20337 219 aa10.11□□□□□ -0.79
CLPTM1-208ENST00000588274 RANBP1P43487 201 aa10.11□□□□□ -0.79
CLPTM1-208ENST00000588274 AQP4P55087 323 aa10.11□□□□□ -0.79
CLPTM1-208ENST00000588274 NANOS2P60321 138 aaKnown RBP10.11□□□□□ -0.79
CLPTM1-208ENST00000588274 TBCEQ15813 527 aaPredicted RBP10.11□□□□□ -0.79
CLPTM1-208ENST00000588274 APRG1Q8IVJ8 170 aa10.11□□□□□ -0.79
CLPTM1-208ENST00000588274 TMEM217Q8N7C4 229 aa10.11□□□□□ -0.79
CLPTM1-208ENST00000588274 GDPD1Q8N9F7 314 aa10.11□□□□□ -0.79
CLPTM1-208ENST00000588274 GALNT14Q96FL9 552 aa10.11□□□□□ -0.79
CLPTM1-208ENST00000588274 SRSF8Q9BRL6 282 aaKnown RBP10.11□□□□□ -0.79
CLPTM1-208ENST00000588274 ATG5Q9H1Y0 275 aa10.11□□□□□ -0.79
CLPTM1-208ENST00000588274 CCL28Q9NRJ3 127 aa10.11□□□□□ -0.79
CLPTM1-208ENST00000588274 IGHV3OR16-8A0A075B7F1 116 aa10.1□□□□□ -0.79
CLPTM1-208ENST00000588274 SMIM30A4D0T7 59 aa10.1□□□□□ -0.79
CLPTM1-208ENST00000588274 METTL21EPA6NDL7 271 aa10.1□□□□□ -0.79
CLPTM1-208ENST00000588274 K7EIM0 57 aa10.1□□□□□ -0.79
CLPTM1-208ENST00000588274 NDUFA4O00483 81 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms