RNA–Protein interactions for RNA: ENST00000587888.5

ERCC1-205, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-205ENST00000587888 CXorf58Q96LI9 332 aa10.58□□□□□ -0.72
ERCC1-205ENST00000587888 RRP15Q9Y3B9 282 aaKnown RBP10.58□□□□□ -0.72
ERCC1-205ENST00000587888 IGLV11-55A0A075B6I3 123 aa10.57□□□□□ -0.72
ERCC1-205ENST00000587888 TRAV18A0A075B6X5 111 aa10.57□□□□□ -0.72
ERCC1-205ENST00000587888 TRAV3A0A0B4J244 114 aa10.57□□□□□ -0.72
ERCC1-205ENST00000587888 CXorf65A6NEN9 183 aa10.57□□□□□ -0.72
ERCC1-205ENST00000587888 A8MWP6 167 aa10.57□□□□□ -0.72
ERCC1-205ENST00000587888 SULT1C2O00338 296 aa10.57□□□□□ -0.72
ERCC1-205ENST00000587888 LY6G6CO95867 125 aa10.57□□□□□ -0.72
ERCC1-205ENST00000587888 GPR183P32249 361 aa10.57□□□□□ -0.72
ERCC1-205ENST00000587888 OR2B8PP59922 312 aa10.57□□□□□ -0.72
ERCC1-205ENST00000587888 PMS2P11Q13670 270 aa10.57□□□□□ -0.72
ERCC1-205ENST00000587888 TIMM50Q3ZCQ8 353 aa10.57□□□□□ -0.72
ERCC1-205ENST00000587888 PLET1Q6UQ28 207 aa10.57□□□□□ -0.72
ERCC1-205ENST00000587888 TPRA1Q86W33 373 aa10.57□□□□□ -0.72
ERCC1-205ENST00000587888 GVQW1Q8N7I0 195 aa10.57□□□□□ -0.72
ERCC1-205ENST00000587888 BEST4Q8NFU0 473 aa10.57□□□□□ -0.72
ERCC1-205ENST00000587888 OR4A5Q8NH83 315 aa10.57□□□□□ -0.72
ERCC1-205ENST00000587888 LGALS14Q8TCE9 139 aa10.57□□□□□ -0.72
ERCC1-205ENST00000587888 AIFM2Q9BRQ8 373 aa10.57□□□□□ -0.72
ERCC1-205ENST00000587888 VCX3BQ9H321 246 aa10.57□□□□□ -0.72
ERCC1-205ENST00000587888 BET1LQ9NYM9 111 aa10.57□□□□□ -0.72
ERCC1-205ENST00000587888 SCGNO76038 276 aa10.56□□□□□ -0.72
ERCC1-205ENST00000587888 RPA2P15927 270 aa10.56□□□□□ -0.72
ERCC1-205ENST00000587888 PSMB9P28065 219 aa10.56□□□□□ -0.72
ERCC1-205ENST00000587888 FGF9P31371 208 aaPredicted RBP10.56□□□□□ -0.72
ERCC1-205ENST00000587888 FXYD4P59646 89 aa10.56□□□□□ -0.72
ERCC1-205ENST00000587888 KLK9Q2XQG4 91 aa10.56□□□□□ -0.72
ERCC1-205ENST00000587888 OR1L6Q8NGR2 347 aa10.56□□□□□ -0.72
ERCC1-205ENST00000587888 OR13F1Q8NGS4 319 aa10.56□□□□□ -0.72
ERCC1-205ENST00000587888 SLC5A7Q9GZV3 580 aa10.56□□□□□ -0.72
ERCC1-205ENST00000587888 MRPL27Q9P0M9 148 aaKnown RBP10.56□□□□□ -0.72
ERCC1-205ENST00000587888 UBQLN2Q9UHD9 624 aa10.56□□□□□ -0.72
ERCC1-205ENST00000587888 KLK9Q9UKQ9 250 aa10.56□□□□□ -0.72
ERCC1-205ENST00000587888 SSR3Q9UNL2 185 aa10.56□□□□□ -0.72
ERCC1-205ENST00000587888 TRAV25A0A0B4J276 109 aa10.55□□□□□ -0.72
ERCC1-205ENST00000587888 A0A0J9YWU9 116 aa10.55□□□□□ -0.72
ERCC1-205ENST00000587888 UPK2O00526 184 aa10.55□□□□□ -0.72
ERCC1-205ENST00000587888 C8orf88P0DMB2 117 aa10.55□□□□□ -0.72
ERCC1-205ENST00000587888 HSPA13P48723 471 aa10.55□□□□□ -0.72
ERCC1-205ENST00000587888 MXD1Q05195 221 aa10.55□□□□□ -0.72
ERCC1-205ENST00000587888 SFXN4Q6P4A7 337 aa10.55□□□□□ -0.72
ERCC1-205ENST00000587888 ZNF773Q6PK81 442 aa10.55□□□□□ -0.72
ERCC1-205ENST00000587888 SLC38A6Q8IZM9 456 aa10.55□□□□□ -0.72
ERCC1-205ENST00000587888 OR2C3Q8N628 320 aa10.55□□□□□ -0.72
ERCC1-205ENST00000587888 OR10W1Q8NGF6 305 aa10.55□□□□□ -0.72
ERCC1-205ENST00000587888 ZNF502Q8TBZ5 544 aa10.55□□□□□ -0.72
ERCC1-205ENST00000587888 MARC2Q969Z3 335 aa10.55□□□□□ -0.72
ERCC1-205ENST00000587888 COMMD5Q9GZQ3 224 aa10.55□□□□□ -0.72
ERCC1-205ENST00000587888 RHBDL2Q9NX52 303 aa10.55□□□□□ -0.72
ERCC1-205ENST00000587888 THYN1Q9P016 225 aa10.55□□□□□ -0.72
ERCC1-205ENST00000587888 UFC1Q9Y3C8 167 aa10.55□□□□□ -0.72
ERCC1-205ENST00000587888 SACSQ9NZJ4 4579 aa10.55□□□□□ -0.72
ERCC1-205ENST00000587888 IGLC7A0M8Q6 106 aa10.54□□□□□ -0.72
ERCC1-205ENST00000587888 SPRY2O43597 315 aa10.54□□□□□ -0.72
ERCC1-205ENST00000587888 HPRT1P00492 218 aa10.54□□□□□ -0.72
ERCC1-205ENST00000587888 PPYP01298 95 aa10.54□□□□□ -0.72
ERCC1-205ENST00000587888 CLEC2LP0C7M8 214 aa10.54□□□□□ -0.72
ERCC1-205ENST00000587888 NQO2P16083 231 aa10.54□□□□□ -0.72
ERCC1-205ENST00000587888 PTBP1P26599 531 aaKnown RBP eCLIP10.54□□□□□ -0.72
ERCC1-205ENST00000587888 SDC2P34741 201 aa10.54□□□□□ -0.72
ERCC1-205ENST00000587888 TAS2R31P59538 309 aa10.54□□□□□ -0.72
ERCC1-205ENST00000587888 EWSR1Q01844 656 aaKnown RBP eCLIP10.54□□□□□ -0.72
ERCC1-205ENST00000587888 IDNKQ5T6J7 187 aa10.54□□□□□ -0.72
ERCC1-205ENST00000587888 UBE2UQ5VVX9 321 aa10.54□□□□□ -0.72
ERCC1-205ENST00000587888 SLC25A24Q6NUK1 477 aa10.54□□□□□ -0.72
ERCC1-205ENST00000587888 HOGA1Q86XE5 327 aa10.54□□□□□ -0.72
ERCC1-205ENST00000587888 SPARTQ8N0X7 666 aa10.54□□□□□ -0.72
ERCC1-205ENST00000587888 ZBTB34Q8NCN2 500 aa10.54□□□□□ -0.72
ERCC1-205ENST00000587888 DMBX1Q8NFW5 382 aa10.54□□□□□ -0.72
ERCC1-205ENST00000587888 OR5H6Q8NGV6 325 aa10.54□□□□□ -0.72
ERCC1-205ENST00000587888 OR51H1Q8NH63 302 aa10.54□□□□□ -0.72
ERCC1-205ENST00000587888 LINC00476Q8WZB0 136 aa10.54□□□□□ -0.72
ERCC1-205ENST00000587888 BIRC6Q9NR09 4857 aa10.54□□□□□ -0.72
ERCC1-205ENST00000587888 HYDINQ4G0P3 5121 aa10.53□□□□□ -0.72
ERCC1-205ENST00000587888 IGHV3-21A0A0B4J1V1 117 aa10.53□□□□□ -0.72
ERCC1-205ENST00000587888 OR2T8A6NH00 312 aa10.53□□□□□ -0.72
ERCC1-205ENST00000587888 APOC4P55056 127 aa10.53□□□□□ -0.72
ERCC1-205ENST00000587888 ELLP55199 621 aaPredicted RBP10.53□□□□□ -0.72
ERCC1-205ENST00000587888 CATR1Q13166 79 aa10.53□□□□□ -0.72
ERCC1-205ENST00000587888 MSMO1Q15800 293 aa10.53□□□□□ -0.72
ERCC1-205ENST00000587888 LYG2Q86SG7 212 aa10.53□□□□□ -0.72
ERCC1-205ENST00000587888 TMEM17Q86X19 198 aa10.53□□□□□ -0.72
ERCC1-205ENST00000587888 ZNF436Q9C0F3 470 aaPredicted RBP10.53□□□□□ -0.72
ERCC1-205ENST00000587888 C5orf66Q9H5L9 145 aa10.53□□□□□ -0.72
ERCC1-205ENST00000587888 RNF167Q9H6Y7 350 aa10.53□□□□□ -0.72
ERCC1-205ENST00000587888 TMEM140Q9NV12 185 aa10.53□□□□□ -0.72
ERCC1-205ENST00000587888 IGHV3OR16-8A0A075B7F1 116 aa10.52□□□□□ -0.73
ERCC1-205ENST00000587888 TEX50A0A1B0GTY4 177 aa10.52□□□□□ -0.73
ERCC1-205ENST00000587888 MEIS3P1A6NDR6 274 aa10.52□□□□□ -0.73
ERCC1-205ENST00000587888 RBFOX2O43251 390 aaKnown RBP eCLIP10.52□□□□□ -0.73
ERCC1-205ENST00000587888 TGOLN2O43493 480 aa10.52□□□□□ -0.73
ERCC1-205ENST00000587888 S1PR2O95136 353 aa10.52□□□□□ -0.73
ERCC1-205ENST00000587888 TRAPPC2P0DI81 140 aa10.52□□□□□ -0.73
ERCC1-205ENST00000587888 TRAPPC2BP0DI82 140 aa10.52□□□□□ -0.73
ERCC1-205ENST00000587888 OR13C7P0DN81 318 aa10.52□□□□□ -0.73
ERCC1-205ENST00000587888 GABARAPL2P60520 117 aa10.52□□□□□ -0.73
ERCC1-205ENST00000587888 DEFB135Q30KP9 77 aa10.52□□□□□ -0.73
ERCC1-205ENST00000587888 AADACL3Q5VUY0 350 aa10.52□□□□□ -0.73
ERCC1-205ENST00000587888 ZNF818PQ6ZRF7 136 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms