RNA–Protein interactions for RNA: ENST00000587201.5

TPM4-206, Transcript of tropomyosin 4, humanhuman

TSL 2

Gene TPM4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-206ENST00000587201 PSMB6P28072 239 aa13.51□□□□□ -0.25
TPM4-206ENST00000587201 POU2AF1Q16633 256 aa13.51□□□□□ -0.25
TPM4-206ENST00000587201 MRPS26Q9BYN8 205 aaKnown RBP13.51□□□□□ -0.25
TPM4-206ENST00000587201 COMMD5Q9GZQ3 224 aa13.51□□□□□ -0.25
TPM4-206ENST00000587201 TMEM140Q9NV12 185 aa13.51□□□□□ -0.25
TPM4-206ENST00000587201 COMMD9Q9P000 198 aa13.51□□□□□ -0.25
TPM4-206ENST00000587201 BMPR1BO00238 502 aa13.5□□□□□ -0.25
TPM4-206ENST00000587201 GPR31O00270 319 aa13.5□□□□□ -0.25
TPM4-206ENST00000587201 REG1AP05451 166 aa13.5□□□□□ -0.25
TPM4-206ENST00000587201 DEFA4P12838 97 aa13.5□□□□□ -0.25
TPM4-206ENST00000587201 ZNF182P17025 639 aaPredicted RBP13.5□□□□□ -0.25
TPM4-206ENST00000587201 CTRB1P17538 263 aa13.5□□□□□ -0.25
TPM4-206ENST00000587201 F2RP25116 425 aa13.5□□□□□ -0.25
TPM4-206ENST00000587201 RCVRNP35243 200 aa13.5□□□□□ -0.25
TPM4-206ENST00000587201 ERVK-16P61578 105 aa13.5□□□□□ -0.25
TPM4-206ENST00000587201 FAM209BQ5JX69 171 aa13.5□□□□□ -0.25
TPM4-206ENST00000587201 CTRB2Q6GPI1 263 aa13.5□□□□□ -0.25
TPM4-206ENST00000587201 IL34Q6ZMJ4 242 aa13.5□□□□□ -0.25
TPM4-206ENST00000587201 FANCD2OSQ96PS1 177 aa13.5□□□□□ -0.25
TPM4-206ENST00000587201 PEMTQ9UBM1 199 aa13.5□□□□□ -0.25
TPM4-206ENST00000587201 CGB1A6NKQ9 187 aa13.49□□□□□ -0.25
TPM4-206ENST00000587201 H0Y980 276 aa13.49□□□□□ -0.25
TPM4-206ENST00000587201 NDUFB8O95169 186 aa13.49□□□□□ -0.25
TPM4-206ENST00000587201 CSN3P07498 182 aa13.49□□□□□ -0.25
TPM4-206ENST00000587201 HIST1H1BP16401 226 aaKnown RBP13.49□□□□□ -0.25
TPM4-206ENST00000587201 LPAR6P43657 344 aa13.49□□□□□ -0.25
TPM4-206ENST00000587201 OR2B8PP59922 312 aa13.49□□□□□ -0.25
TPM4-206ENST00000587201 RNASE12Q5GAN4 147 aaKnown RBP13.49□□□□□ -0.25
TPM4-206ENST00000587201 GPR141Q7Z602 305 aa13.49□□□□□ -0.25
TPM4-206ENST00000587201 DGCR14Q96DF8 476 aaKnown RBP13.49□□□□□ -0.25
TPM4-206ENST00000587201 U3KQK5 164 aa13.49□□□□□ -0.25
TPM4-206ENST00000587201 COL7A1Q02388 2944 aa13.48□□□□□ -0.25
TPM4-206ENST00000587201 MARCH11A6NNE9 402 aa13.48□□□□□ -0.25
TPM4-206ENST00000587201 PPP5D1E7EU14 171 aa13.48□□□□□ -0.25
TPM4-206ENST00000587201 IGHV3-23P01764 117 aa13.48□□□□□ -0.25
TPM4-206ENST00000587201 S100GP29377 79 aa13.48□□□□□ -0.25
TPM4-206ENST00000587201 PHLDA2Q53GA4 152 aa13.48□□□□□ -0.25
TPM4-206ENST00000587201 LPCAT3Q6P1A2 487 aa13.48□□□□□ -0.25
TPM4-206ENST00000587201 FCAMRQ8WWV6 532 aa13.48□□□□□ -0.25
TPM4-206ENST00000587201 WWC2-AS2Q96NR7 200 aa13.48□□□□□ -0.25
TPM4-206ENST00000587201 SIGLEC8Q9NYZ4 499 aa13.48□□□□□ -0.25
TPM4-206ENST00000587201 EXTL2Q9UBQ6 330 aa13.48□□□□□ -0.25
TPM4-206ENST00000587201 S4R3C0 116 aa13.48□□□□□ -0.25
TPM4-206ENST00000587201 GGCTO75223 188 aaKnown RBP13.47□□□□□ -0.25
TPM4-206ENST00000587201 EEF1AKMT3Q96AZ1 226 aa13.47□□□□□ -0.25
TPM4-206ENST00000587201 SRSF8Q9BRL6 282 aaKnown RBP13.47□□□□□ -0.25
TPM4-206ENST00000587201 KRASP01116 189 aa13.46□□□□□ -0.25
TPM4-206ENST00000587201 HLA-AP01891 365 aaKnown RBP13.46□□□□□ -0.25
TPM4-206ENST00000587201 FGF2P09038 288 aa13.46□□□□□ -0.25
TPM4-206ENST00000587201 FRMD6-AS1P0C7T7 363 aa13.46□□□□□ -0.25
TPM4-206ENST00000587201 G6PCP35575 357 aa13.46□□□□□ -0.25
TPM4-206ENST00000587201 ALDH3B2P48448 385 aa13.46□□□□□ -0.25
TPM4-206ENST00000587201 KLK9Q2XQG4 91 aa13.46□□□□□ -0.25
TPM4-206ENST00000587201 ZNF585BQ52M93 769 aa13.46□□□□□ -0.25
TPM4-206ENST00000587201 LCN12Q6JVE5 192 aa13.46□□□□□ -0.25
TPM4-206ENST00000587201 CLEC19AQ6UXS0 136 aa13.46□□□□□ -0.25
TPM4-206ENST00000587201 SBSPONQ8IVN8 264 aa13.46□□□□□ -0.25
TPM4-206ENST00000587201 QTRT1Q9BXR0 403 aaKnown RBP13.46□□□□□ -0.25
TPM4-206ENST00000587201 KLK9Q9UKQ9 250 aa13.46□□□□□ -0.25
TPM4-206ENST00000587201 DMRT1Q9Y5R6 373 aa13.46□□□□□ -0.25
TPM4-206ENST00000587201 IGLV11-55A0A075B6I3 123 aa13.45□□□□□ -0.26
TPM4-206ENST00000587201 TEX50A0A1B0GTY4 177 aa13.45□□□□□ -0.26
TPM4-206ENST00000587201 IGLC7A0M8Q6 106 aa13.45□□□□□ -0.26
TPM4-206ENST00000587201 M0QYG6 137 aa13.45□□□□□ -0.26
TPM4-206ENST00000587201 SNAPC5O75971 98 aa13.45□□□□□ -0.26
TPM4-206ENST00000587201 OR2C1O95371 312 aa13.45□□□□□ -0.26
TPM4-206ENST00000587201 TRAPPC2P0DI81 140 aa13.45□□□□□ -0.26
TPM4-206ENST00000587201 TRAPPC2BP0DI82 140 aa13.45□□□□□ -0.26
TPM4-206ENST00000587201 ARL3P36405 182 aa13.45□□□□□ -0.26
TPM4-206ENST00000587201 THOC7Q6I9Y2 204 aaKnown RBP13.45□□□□□ -0.26
TPM4-206ENST00000587201 TBC1D26Q86UD7 250 aa13.45□□□□□ -0.26
TPM4-206ENST00000587201 SGPP2Q8IWX5 399 aa13.45□□□□□ -0.26
TPM4-206ENST00000587201 SLC38A6Q8IZM9 456 aa13.45□□□□□ -0.26
TPM4-206ENST00000587201 Q8N1Y9 231 aa13.45□□□□□ -0.26
TPM4-206ENST00000587201 Q8N402 240 aa13.45□□□□□ -0.26
TPM4-206ENST00000587201 OR10W1Q8NGF6 305 aa13.45□□□□□ -0.26
TPM4-206ENST00000587201 CXorf58Q96LI9 332 aa13.45□□□□□ -0.26
TPM4-206ENST00000587201 CCDC140Q96MF4 163 aa13.45□□□□□ -0.26
TPM4-206ENST00000587201 KLK11Q9UBX7 282 aa13.45□□□□□ -0.26
TPM4-206ENST00000587201 NSG2Q9Y328 171 aa13.45□□□□□ -0.26
TPM4-206ENST00000587201 IFNA6P05013 189 aa13.44□□□□□ -0.26
TPM4-206ENST00000587201 IGHV4-30-4P0DP06 118 aa13.44□□□□□ -0.26
TPM4-206ENST00000587201 UCP3P55916 312 aa13.44□□□□□ -0.26
TPM4-206ENST00000587201 OR1L8Q8NGR8 309 aa13.44□□□□□ -0.26
TPM4-206ENST00000587201 OR52I2Q8NH67 350 aa13.44□□□□□ -0.26
TPM4-206ENST00000587201 HINT2Q9BX68 163 aa13.44□□□□□ -0.26
TPM4-206ENST00000587201 THYN1Q9P016 225 aa13.44□□□□□ -0.26
TPM4-206ENST00000587201 TRBV7-1A0A0A6YYK4 115 aa13.43□□□□□ -0.26
TPM4-206ENST00000587201 IZUMO1RA6ND01 250 aa13.43□□□□□ -0.26
TPM4-206ENST00000587201 MFSD2BA6NFX1 497 aa13.43□□□□□ -0.26
TPM4-206ENST00000587201 RGS5O15539 181 aa13.43□□□□□ -0.26
TPM4-206ENST00000587201 CYB5BO43169 146 aa13.43□□□□□ -0.26
TPM4-206ENST00000587201 OR13C7P0DN81 318 aa13.43□□□□□ -0.26
TPM4-206ENST00000587201 SPCS2Q15005 226 aa13.43□□□□□ -0.26
TPM4-206ENST00000587201 RNASE10Q5GAN6 216 aaKnown RBP13.43□□□□□ -0.26
TPM4-206ENST00000587201 HSD17B13Q7Z5P4 300 aaPredicted RBP13.43□□□□□ -0.26
TPM4-206ENST00000587201 GTSCR1Q86UQ5 136 aa13.43□□□□□ -0.26
TPM4-206ENST00000587201 CLVS1Q8IUQ0 354 aaPredicted RBP13.43□□□□□ -0.26
TPM4-206ENST00000587201 CADM3Q8N126 398 aa13.43□□□□□ -0.26
TPM4-206ENST00000587201 OR2K2Q8NGT1 345 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms