RNA–Protein interactions for RNA: ENST00000586495.1

TRIM47-203, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 605 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-203ENST00000586495 YIPF6Q96EC8 236 aa12.86□□□□□ -0.35
TRIM47-203ENST00000586495 CXorf58Q96LI9 332 aa12.86□□□□□ -0.35
TRIM47-203ENST00000586495 COMMD5Q9GZQ3 224 aa12.86□□□□□ -0.35
TRIM47-203ENST00000586495 PLEKHA2Q9HB19 425 aa12.86□□□□□ -0.35
TRIM47-203ENST00000586495 SLC2A8Q9NY64 477 aa12.86□□□□□ -0.35
TRIM47-203ENST00000586495 TECRQ9NZ01 308 aaKnown RBP12.86□□□□□ -0.35
TRIM47-203ENST00000586495 NBEAL2Q6ZNJ1 2754 aa12.86□□□□□ -0.35
TRIM47-203ENST00000586495 TRBV7-1A0A0A6YYK4 115 aa12.85□□□□□ -0.35
TRIM47-203ENST00000586495 C2orf70A6NJV1 201 aa12.85□□□□□ -0.35
TRIM47-203ENST00000586495 UPK2O00526 184 aa12.85□□□□□ -0.35
TRIM47-203ENST00000586495 TNFAIP8O95379 198 aa12.85□□□□□ -0.35
TRIM47-203ENST00000586495 FGF2P09038 288 aa12.85□□□□□ -0.35
TRIM47-203ENST00000586495 LYL1P12980 280 aa12.85□□□□□ -0.35
TRIM47-203ENST00000586495 GNRHRP30968 328 aa12.85□□□□□ -0.35
TRIM47-203ENST00000586495 TAS2R20P59543 309 aa12.85□□□□□ -0.35
TRIM47-203ENST00000586495 LSM3P62310 102 aaKnown RBP12.85□□□□□ -0.35
TRIM47-203ENST00000586495 HAGHQ16775 308 aa12.85□□□□□ -0.35
TRIM47-203ENST00000586495 FAM106AQ4KMX7 169 aa12.85□□□□□ -0.35
TRIM47-203ENST00000586495 SAMD12Q8N8I0 201 aa12.85□□□□□ -0.35
TRIM47-203ENST00000586495 DMBX1Q8NFW5 382 aa12.85□□□□□ -0.35
TRIM47-203ENST00000586495 TSPAN14Q8NG11 270 aa12.85□□□□□ -0.35
TRIM47-203ENST00000586495 SRSF8Q9BRL6 282 aaKnown RBP12.85□□□□□ -0.35
TRIM47-203ENST00000586495 PALMDQ9NP74 551 aa12.85□□□□□ -0.35
TRIM47-203ENST00000586495 COMMD9Q9P000 198 aa12.85□□□□□ -0.35
TRIM47-203ENST00000586495 THYN1Q9P016 225 aa12.85□□□□□ -0.35
TRIM47-203ENST00000586495 STAB2Q8WWQ8 2551 aa12.85□□□□□ -0.35
TRIM47-203ENST00000586495 CGB1A6NKQ9 187 aa12.84□□□□□ -0.35
TRIM47-203ENST00000586495 CYB5BO43169 146 aa12.84□□□□□ -0.35
TRIM47-203ENST00000586495 TPPPO94811 219 aa12.84□□□□□ -0.35
TRIM47-203ENST00000586495 IGHV3-23P01764 117 aa12.84□□□□□ -0.35
TRIM47-203ENST00000586495 HLA-AP01891 365 aaKnown RBP12.84□□□□□ -0.35
TRIM47-203ENST00000586495 IFNA6P05013 189 aa12.84□□□□□ -0.35
TRIM47-203ENST00000586495 REG1AP05451 166 aa12.84□□□□□ -0.35
TRIM47-203ENST00000586495 FOLR2P14207 255 aa12.84□□□□□ -0.35
TRIM47-203ENST00000586495 MYOD1P15172 320 aa12.84□□□□□ -0.35
TRIM47-203ENST00000586495 PRSS3P35030 304 aa12.84□□□□□ -0.35
TRIM47-203ENST00000586495 RFX2P48378 723 aa12.84□□□□□ -0.35
TRIM47-203ENST00000586495 TAS2R46P59540 309 aa12.84□□□□□ -0.35
TRIM47-203ENST00000586495 OR2B8PP59922 312 aa12.84□□□□□ -0.35
TRIM47-203ENST00000586495 CD81P60033 236 aa12.84□□□□□ -0.35
TRIM47-203ENST00000586495 ERVK-16P61578 105 aa12.84□□□□□ -0.35
TRIM47-203ENST00000586495 DEFB114Q30KQ6 69 aa12.84□□□□□ -0.35
TRIM47-203ENST00000586495 THOC7Q6I9Y2 204 aaKnown RBP12.84□□□□□ -0.35
TRIM47-203ENST00000586495 ADAMTSL5Q6ZMM2 481 aa12.84□□□□□ -0.35
TRIM47-203ENST00000586495 OR5H2Q8NGV7 314 aa12.84□□□□□ -0.35
TRIM47-203ENST00000586495 CCDC140Q96MF4 163 aa12.84□□□□□ -0.35
TRIM47-203ENST00000586495 ZNF2Q9BSG1 426 aaPredicted RBP12.84□□□□□ -0.35
TRIM47-203ENST00000586495 TMEM140Q9NV12 185 aa12.84□□□□□ -0.35
TRIM47-203ENST00000586495 ANAPC10Q9UM13 185 aa12.84□□□□□ -0.35
TRIM47-203ENST00000586495 HUWE1Q7Z6Z7 4374 aaKnown RBP12.83□□□□□ -0.36
TRIM47-203ENST00000586495 IGLV11-55A0A075B6I3 123 aa12.83□□□□□ -0.36
TRIM47-203ENST00000586495 ZNF785A8K8V0 405 aa12.83□□□□□ -0.36
TRIM47-203ENST00000586495 S1PR2O95136 353 aa12.83□□□□□ -0.36
TRIM47-203ENST00000586495 PMP2P02689 132 aa12.83□□□□□ -0.36
TRIM47-203ENST00000586495 NAT1P18440 290 aa12.83□□□□□ -0.36
TRIM47-203ENST00000586495 CMTM1Q8IZ96 169 aa12.83□□□□□ -0.36
TRIM47-203ENST00000586495 MOB3AQ96BX8 217 aa12.83□□□□□ -0.36
TRIM47-203ENST00000586495 ISOC1Q96CN7 298 aa12.83□□□□□ -0.36
TRIM47-203ENST00000586495 NEURL2Q9BR09 285 aa12.83□□□□□ -0.36
TRIM47-203ENST00000586495 S4R3C0 116 aa12.83□□□□□ -0.36
TRIM47-203ENST00000586495 TRAV3A0A0B4J244 114 aa12.82□□□□□ -0.36
TRIM47-203ENST00000586495 SMIM31A0A1B0GVY4 71 aa12.82□□□□□ -0.36
TRIM47-203ENST00000586495 ZNF320A2RRD8 509 aa12.82□□□□□ -0.36
TRIM47-203ENST00000586495 PGLYRP1O75594 196 aaPredicted RBP12.82□□□□□ -0.36
TRIM47-203ENST00000586495 CLEC3BP05452 202 aa12.82□□□□□ -0.36
TRIM47-203ENST00000586495 CBLN1P23435 193 aa12.82□□□□□ -0.36
TRIM47-203ENST00000586495 F2RP25116 425 aa12.82□□□□□ -0.36
TRIM47-203ENST00000586495 GUCA2BQ16661 112 aa12.82□□□□□ -0.36
TRIM47-203ENST00000586495 HSD17B13Q7Z5P4 300 aaPredicted RBP12.82□□□□□ -0.36
TRIM47-203ENST00000586495 OR6F1Q8NGZ6 308 aa12.82□□□□□ -0.36
TRIM47-203ENST00000586495 SLC25A46Q96AG3 418 aa12.82□□□□□ -0.36
TRIM47-203ENST00000586495 QTRT1Q9BXR0 403 aaKnown RBP12.82□□□□□ -0.36
TRIM47-203ENST00000586495 PLEKHA3Q9HB20 300 aa12.82□□□□□ -0.36
TRIM47-203ENST00000586495 ZC4H2Q9NQZ6 224 aa12.82□□□□□ -0.36
TRIM47-203ENST00000586495 IGLC7A0M8Q6 106 aa12.81□□□□□ -0.36
TRIM47-203ENST00000586495 MARCH11A6NNE9 402 aa12.81□□□□□ -0.36
TRIM47-203ENST00000586495 RLN1P04808 185 aa12.81□□□□□ -0.36
TRIM47-203ENST00000586495 TRAPPC2P0DI81 140 aa12.81□□□□□ -0.36
TRIM47-203ENST00000586495 TRAPPC2BP0DI82 140 aa12.81□□□□□ -0.36
TRIM47-203ENST00000586495 OR1L8Q8NGR8 309 aa12.81□□□□□ -0.36
TRIM47-203ENST00000586495 CMTM3Q96MX0 182 aa12.81□□□□□ -0.36
TRIM47-203ENST00000586495 EDA2RQ9HAV5 297 aa12.81□□□□□ -0.36
TRIM47-203ENST00000586495 CEPT1Q9Y6K0 416 aa12.81□□□□□ -0.36
TRIM47-203ENST00000586495 MFSD2BA6NFX1 497 aa12.8□□□□□ -0.36
TRIM47-203ENST00000586495 A8MWP6 167 aa12.8□□□□□ -0.36
TRIM47-203ENST00000586495 GPR31O00270 319 aa12.8□□□□□ -0.36
TRIM47-203ENST00000586495 CD7P09564 240 aa12.8□□□□□ -0.36
TRIM47-203ENST00000586495 RPA2P15927 270 aa12.8□□□□□ -0.36
TRIM47-203ENST00000586495 PTBP1P26599 531 aaKnown RBP eCLIP12.8□□□□□ -0.36
TRIM47-203ENST00000586495 S100GP29377 79 aa12.8□□□□□ -0.36
TRIM47-203ENST00000586495 LPAR6P43657 344 aa12.8□□□□□ -0.36
TRIM47-203ENST00000586495 ZNF57Q68EA5 555 aaPredicted RBP12.8□□□□□ -0.36
TRIM47-203ENST00000586495 LPCAT3Q6P1A2 487 aa12.8□□□□□ -0.36
TRIM47-203ENST00000586495 CADM3Q8N126 398 aa12.8□□□□□ -0.36
TRIM47-203ENST00000586495 DGCR14Q96DF8 476 aaKnown RBP12.8□□□□□ -0.36
TRIM47-203ENST00000586495 COMMD3Q9UBI1 195 aa12.8□□□□□ -0.36
TRIM47-203ENST00000586495 TEX50A0A1B0GTY4 177 aa12.79□□□□□ -0.36
TRIM47-203ENST00000586495 SNAPC5O75971 98 aa12.79□□□□□ -0.36
TRIM47-203ENST00000586495 EDN2P20800 178 aa12.79□□□□□ -0.36
TRIM47-203ENST00000586495 HLA-DMAP28067 261 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms