RNA–Protein interactions for RNA: ENST00000584186.1

CDK5RAP3-233, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 3

Gene CDK5RAP3, Length 482 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-233	ENST00000584186	UPK2	O00526	184 aa		10.36	□□□□□ -0.75
CDK5RAP3-233	ENST00000584186	PGLYRP1	O75594	196 aa	Predicted RBP	10.36	□□□□□ -0.75
CDK5RAP3-233	ENST00000584186	OR2C1	O95371	312 aa		10.36	□□□□□ -0.75
CDK5RAP3-233	ENST00000584186	CRYGC	P07315	174 aa		10.36	□□□□□ -0.75
CDK5RAP3-233	ENST00000584186	HRH1	P35367	487 aa		10.36	□□□□□ -0.75
CDK5RAP3-233	ENST00000584186	OR2B8P	P59922	312 aa		10.36	□□□□□ -0.75
CDK5RAP3-233	ENST00000584186	ERVK-16	P61578	105 aa		10.36	□□□□□ -0.75
CDK5RAP3-233	ENST00000584186	CLEC19A	Q6UXS0	136 aa		10.36	□□□□□ -0.75
CDK5RAP3-233	ENST00000584186	GTSCR1	Q86UQ5	136 aa		10.36	□□□□□ -0.75
CDK5RAP3-233	ENST00000584186	LYSMD2	Q8IV50	215 aa		10.36	□□□□□ -0.75
CDK5RAP3-233	ENST00000584186		Q8N1Y9	231 aa		10.36	□□□□□ -0.75
CDK5RAP3-233	ENST00000584186		Q8N402	240 aa		10.36	□□□□□ -0.75
CDK5RAP3-233	ENST00000584186	OR6F1	Q8NGZ6	308 aa		10.36	□□□□□ -0.75
CDK5RAP3-233	ENST00000584186	FANCD2OS	Q96PS1	177 aa		10.36	□□□□□ -0.75
CDK5RAP3-233	ENST00000584186	ZMAT4	Q9H898	229 aa		10.36	□□□□□ -0.75
CDK5RAP3-233	ENST00000584186	PLEKHA2	Q9HB19	425 aa		10.36	□□□□□ -0.75
CDK5RAP3-233	ENST00000584186	ANAPC10	Q9UM13	185 aa		10.36	□□□□□ -0.75
CDK5RAP3-233	ENST00000584186	CGB1	A6NKQ9	187 aa		10.35	□□□□□ -0.75
CDK5RAP3-233	ENST00000584186	HPGDS	O60760	199 aa		10.35	□□□□□ -0.75
CDK5RAP3-233	ENST00000584186	GGCT	O75223	188 aa	Known RBP	10.35	□□□□□ -0.75
CDK5RAP3-233	ENST00000584186	APOA1	P02647	267 aa		10.35	□□□□□ -0.75
CDK5RAP3-233	ENST00000584186	HIST1H1B	P16401	226 aa	Known RBP	10.35	□□□□□ -0.75
CDK5RAP3-233	ENST00000584186	CTRB1	P17538	263 aa		10.35	□□□□□ -0.75
CDK5RAP3-233	ENST00000584186	NAT1	P18440	290 aa		10.35	□□□□□ -0.75
CDK5RAP3-233	ENST00000584186	ARL3	P36405	182 aa		10.35	□□□□□ -0.75
CDK5RAP3-233	ENST00000584186	RORC	P51449	518 aa		10.35	□□□□□ -0.75
CDK5RAP3-233	ENST00000584186	TSPAN5	P62079	268 aa		10.35	□□□□□ -0.75
CDK5RAP3-233	ENST00000584186	FAM209B	Q5JX69	171 aa		10.35	□□□□□ -0.75
CDK5RAP3-233	ENST00000584186	CTRB2	Q6GPI1	263 aa		10.35	□□□□□ -0.75
CDK5RAP3-233	ENST00000584186	CMTM1	Q8IZ96	169 aa		10.35	□□□□□ -0.75
CDK5RAP3-233	ENST00000584186	DYNLRB2	Q8TF09	96 aa		10.35	□□□□□ -0.75
CDK5RAP3-233	ENST00000584186	EEF1AKMT3	Q96AZ1	226 aa		10.35	□□□□□ -0.75
CDK5RAP3-233	ENST00000584186	FXYD6	Q9H0Q3	95 aa		10.35	□□□□□ -0.75
CDK5RAP3-233	ENST00000584186	ZC4H2	Q9NQZ6	224 aa		10.35	□□□□□ -0.75
CDK5RAP3-233	ENST00000584186	SIGLEC8	Q9NYZ4	499 aa		10.35	□□□□□ -0.75
CDK5RAP3-233	ENST00000584186	ZNF320	A2RRD8	509 aa		10.34	□□□□□ -0.75
CDK5RAP3-233	ENST00000584186	MARCH11	A6NNE9	402 aa		10.34	□□□□□ -0.75
CDK5RAP3-233	ENST00000584186	FAM25A	B3EWG3	89 aa		10.34	□□□□□ -0.75
CDK5RAP3-233	ENST00000584186	FAM25C	B3EWG5	89 aa		10.34	□□□□□ -0.75
CDK5RAP3-233	ENST00000584186	FAM25G	B3EWG6	89 aa		10.34	□□□□□ -0.75
CDK5RAP3-233	ENST00000584186	KRAS	P01116	189 aa		10.34	□□□□□ -0.75
CDK5RAP3-233	ENST00000584186	ELK1	P19419	428 aa		10.34	□□□□□ -0.75
CDK5RAP3-233	ENST00000584186	EDN2	P20800	178 aa		10.34	□□□□□ -0.75
CDK5RAP3-233	ENST00000584186	F2R	P25116	425 aa		10.34	□□□□□ -0.75
CDK5RAP3-233	ENST00000584186	LPAR6	P43657	344 aa		10.34	□□□□□ -0.75
CDK5RAP3-233	ENST00000584186	POU2AF1	Q16633	256 aa		10.34	□□□□□ -0.75
CDK5RAP3-233	ENST00000584186	CD300E	Q496F6	205 aa	Predicted RBP	10.34	□□□□□ -0.75
CDK5RAP3-233	ENST00000584186	PHLDA2	Q53GA4	152 aa		10.34	□□□□□ -0.75
CDK5RAP3-233	ENST00000584186	RNASE12	Q5GAN4	147 aa	Known RBP	10.34	□□□□□ -0.75
CDK5RAP3-233	ENST00000584186	OR10W1	Q8NGF6	305 aa		10.34	□□□□□ -0.75
CDK5RAP3-233	ENST00000584186	GPX8	Q8TED1	209 aa		10.34	□□□□□ -0.75
CDK5RAP3-233	ENST00000584186	FCAMR	Q8WWV6	532 aa		10.34	□□□□□ -0.75
CDK5RAP3-233	ENST00000584186	DGCR14	Q96DF8	476 aa	Known RBP	10.34	□□□□□ -0.75
CDK5RAP3-233	ENST00000584186	CCDC140	Q96MF4	163 aa		10.34	□□□□□ -0.75
CDK5RAP3-233	ENST00000584186	HINT2	Q9BX68	163 aa		10.34	□□□□□ -0.75
CDK5RAP3-233	ENST00000584186	QTRT1	Q9BXR0	403 aa	Known RBP	10.34	□□□□□ -0.75
CDK5RAP3-233	ENST00000584186	NAA50	Q9GZZ1	169 aa	Known RBP	10.34	□□□□□ -0.75
CDK5RAP3-233	ENST00000584186	TUBA4B	Q9H853	241 aa		10.34	□□□□□ -0.75
CDK5RAP3-233	ENST00000584186	COMMD9	Q9P000	198 aa		10.34	□□□□□ -0.75
CDK5RAP3-233	ENST00000584186	SELENOK	Q9Y6D0	94 aa		10.34	□□□□□ -0.75
CDK5RAP3-233	ENST00000584186	IGLV11-55	A0A075B6I3	123 aa		10.33	□□□□□ -0.76
CDK5RAP3-233	ENST00000584186	IGLC7	A0M8Q6	106 aa		10.33	□□□□□ -0.76
CDK5RAP3-233	ENST00000584186	MFSD2B	A6NFX1	497 aa		10.33	□□□□□ -0.76
CDK5RAP3-233	ENST00000584186	GPR31	O00270	319 aa		10.33	□□□□□ -0.76
CDK5RAP3-233	ENST00000584186	FOLR2	P14207	255 aa		10.33	□□□□□ -0.76
CDK5RAP3-233	ENST00000584186	G6PC	P35575	357 aa		10.33	□□□□□ -0.76
CDK5RAP3-233	ENST00000584186	ADAMTSL5	Q6ZMM2	481 aa		10.33	□□□□□ -0.76
CDK5RAP3-233	ENST00000584186	CMTM3	Q96MX0	182 aa		10.33	□□□□□ -0.76
CDK5RAP3-233	ENST00000584186	SCPEP1	Q9HB40	452 aa		10.33	□□□□□ -0.76
CDK5RAP3-233	ENST00000584186	NSG2	Q9Y328	171 aa		10.33	□□□□□ -0.76
CDK5RAP3-233	ENST00000584186	DMRT1	Q9Y5R6	373 aa		10.33	□□□□□ -0.76
CDK5RAP3-233	ENST00000584186	STAB2	Q8WWQ8	2551 aa		10.32	□□□□□ -0.76
CDK5RAP3-233	ENST00000584186	TEX50	A0A1B0GTY4	177 aa		10.32	□□□□□ -0.76
CDK5RAP3-233	ENST00000584186	C2orf70	A6NJV1	201 aa		10.32	□□□□□ -0.76
CDK5RAP3-233	ENST00000584186	SNAPC5	O75971	98 aa		10.32	□□□□□ -0.76
CDK5RAP3-233	ENST00000584186	CLEC3B	P05452	202 aa		10.32	□□□□□ -0.76
CDK5RAP3-233	ENST00000584186	TRAPPC2	P0DI81	140 aa		10.32	□□□□□ -0.76
CDK5RAP3-233	ENST00000584186	TRAPPC2B	P0DI82	140 aa		10.32	□□□□□ -0.76
CDK5RAP3-233	ENST00000584186	SMIM18	P0DKX4	95 aa		10.32	□□□□□ -0.76
CDK5RAP3-233	ENST00000584186	S100G	P29377	79 aa		10.32	□□□□□ -0.76
CDK5RAP3-233	ENST00000584186	RCVRN	P35243	200 aa		10.32	□□□□□ -0.76
CDK5RAP3-233	ENST00000584186	CD81	P60033	236 aa		10.32	□□□□□ -0.76
CDK5RAP3-233	ENST00000584186	GUCA2B	Q16661	112 aa		10.32	□□□□□ -0.76
CDK5RAP3-233	ENST00000584186	FAM106A	Q4KMX7	169 aa		10.32	□□□□□ -0.76
CDK5RAP3-233	ENST00000584186	GPR107	Q5VW38	600 aa		10.32	□□□□□ -0.76
CDK5RAP3-233	ENST00000584186	MZT2A	Q6P582	158 aa		10.32	□□□□□ -0.76
CDK5RAP3-233	ENST00000584186	CACNG8	Q8WXS5	425 aa		10.32	□□□□□ -0.76
CDK5RAP3-233	ENST00000584186	CXorf58	Q96LI9	332 aa		10.32	□□□□□ -0.76
CDK5RAP3-233	ENST00000584186	C19orf73	Q9NVV2	129 aa		10.32	□□□□□ -0.76
CDK5RAP3-233	ENST00000584186	TRBV7-1	A0A0A6YYK4	115 aa		10.31	□□□□□ -0.76
CDK5RAP3-233	ENST00000584186		A8MZ25	164 aa		10.31	□□□□□ -0.76
CDK5RAP3-233	ENST00000584186		M0QYG6	137 aa		10.31	□□□□□ -0.76
CDK5RAP3-233	ENST00000584186	OR13C7	P0DN81	318 aa		10.31	□□□□□ -0.76
CDK5RAP3-233	ENST00000584186	GPR183	P32249	361 aa		10.31	□□□□□ -0.76
CDK5RAP3-233	ENST00000584186	MECP2	P51608	486 aa	Known RBP	10.31	□□□□□ -0.76
CDK5RAP3-233	ENST00000584186	CTF1	Q16619	201 aa		10.31	□□□□□ -0.76
CDK5RAP3-233	ENST00000584186	DEFB114	Q30KQ6	69 aa		10.31	□□□□□ -0.76
CDK5RAP3-233	ENST00000584186	ZNF585B	Q52M93	769 aa		10.31	□□□□□ -0.76
CDK5RAP3-233	ENST00000584186	LPCAT3	Q6P1A2	487 aa		10.31	□□□□□ -0.76
CDK5RAP3-233	ENST00000584186	GPHB5	Q86YW7	130 aa		10.31	□□□□□ -0.76

Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms