RNA–Protein interactions for RNA: ENST00000583804.2

TOP3A-216, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 1,465 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-216ENST00000583804 SRPXP78539 464 aa8.74□□□□□ -1.01
TOP3A-216ENST00000583804 MMDQ15546 238 aa8.74□□□□□ -1.01
TOP3A-216ENST00000583804 IAH1Q2TAA2 248 aaPredicted RBP8.74□□□□□ -1.01
TOP3A-216ENST00000583804 SPINK9Q5DT21 86 aa8.74□□□□□ -1.01
TOP3A-216ENST00000583804 DHRS7BQ6IAN0 325 aaPredicted RBP8.74□□□□□ -1.01
TOP3A-216ENST00000583804 ACOT7LQ6ZUV0 252 aa8.74□□□□□ -1.01
TOP3A-216ENST00000583804 EIF4E3Q8N5X7 224 aaKnown RBP8.74□□□□□ -1.01
TOP3A-216ENST00000583804 TCTEX1D1Q8N7M0 179 aa8.74□□□□□ -1.01
TOP3A-216ENST00000583804 CD300LFQ8TDQ1 290 aa8.74□□□□□ -1.01
TOP3A-216ENST00000583804 RRNAD1Q96FB5 475 aaKnown RBP8.74□□□□□ -1.01
TOP3A-216ENST00000583804 PHYHIPLQ96FC7 376 aa8.74□□□□□ -1.01
TOP3A-216ENST00000583804 TMEM56Q96MV1 263 aa8.74□□□□□ -1.01
TOP3A-216ENST00000583804 NMES1Q9C002 83 aa8.74□□□□□ -1.01
TOP3A-216ENST00000583804 SLC25A32Q9H2D1 315 aa8.74□□□□□ -1.01
TOP3A-216ENST00000583804 TPSG1Q9NRR2 321 aa8.74□□□□□ -1.01
TOP3A-216ENST00000583804 C1RLQ9NZP8 487 aa8.74□□□□□ -1.01
TOP3A-216ENST00000583804 CACNG5Q9UF02 275 aa8.74□□□□□ -1.01
TOP3A-216ENST00000583804 TMEM56-RWDD3S4R434 201 aa8.74□□□□□ -1.01
TOP3A-216ENST00000583804 TRAV3A0A0B4J244 114 aa8.73□□□□□ -1.01
TOP3A-216ENST00000583804 FAM181BA6NEQ2 426 aa8.73□□□□□ -1.01
TOP3A-216ENST00000583804 SRRM4A7MD48 611 aaKnown RBP8.73□□□□□ -1.01
TOP3A-216ENST00000583804 TRIM77I1YAP6 450 aa8.73□□□□□ -1.01
TOP3A-216ENST00000583804 NBR2O15453 112 aa8.73□□□□□ -1.01
TOP3A-216ENST00000583804 RBMXL2O75526 392 aaKnown RBP8.73□□□□□ -1.01
TOP3A-216ENST00000583804 RNASE1P07998 156 aaKnown RBP8.73□□□□□ -1.01
TOP3A-216ENST00000583804 MYOD1P15172 320 aa8.73□□□□□ -1.01
TOP3A-216ENST00000583804 ZP3P21754 424 aa8.73□□□□□ -1.01
TOP3A-216ENST00000583804 LGALS7P47929 136 aa8.73□□□□□ -1.01
TOP3A-216ENST00000583804 S100A10P60903 97 aa8.73□□□□□ -1.01
TOP3A-216ENST00000583804 PLGLAQ15195 96 aa8.73□□□□□ -1.01
TOP3A-216ENST00000583804 TMEM177Q53S58 311 aa8.73□□□□□ -1.01
TOP3A-216ENST00000583804 HSD17B13Q7Z5P4 300 aaPredicted RBP8.73□□□□□ -1.01
TOP3A-216ENST00000583804 Q8N6K4 173 aa8.73□□□□□ -1.01
TOP3A-216ENST00000583804 OSR1Q8TAX0 266 aaPredicted RBP8.73□□□□□ -1.01
TOP3A-216ENST00000583804 LRRC20Q8TCA0 184 aa8.73□□□□□ -1.01
TOP3A-216ENST00000583804 CLCC1Q96S66 551 aa8.73□□□□□ -1.01
TOP3A-216ENST00000583804 TSNAXQ99598 290 aaKnown RBP8.73□□□□□ -1.01
TOP3A-216ENST00000583804 RNF5Q99942 180 aa8.73□□□□□ -1.01
TOP3A-216ENST00000583804 RAB18Q9NP72 206 aa8.73□□□□□ -1.01
TOP3A-216ENST00000583804 TMEM140Q9NV12 185 aa8.73□□□□□ -1.01
TOP3A-216ENST00000583804 KIAA1456Q9P272 454 aa8.73□□□□□ -1.01
TOP3A-216ENST00000583804 PFDN2Q9UHV9 154 aa8.73□□□□□ -1.01
TOP3A-216ENST00000583804 MOB4Q9Y3A3 225 aa8.73□□□□□ -1.01
TOP3A-216ENST00000583804 NIPBLQ6KC79 2804 aaeCLIP8.73□□□□□ -1.01
TOP3A-216ENST00000583804 KANTRA0A1W2PQU2 76 aa8.72□□□□□ -1.01
TOP3A-216ENST00000583804 RNF222A6NCQ9 220 aa8.72□□□□□ -1.01
TOP3A-216ENST00000583804 MARCH11A6NNE9 402 aa8.72□□□□□ -1.01
TOP3A-216ENST00000583804 RBFOX2O43251 390 aaKnown RBP eCLIP8.72□□□□□ -1.01
TOP3A-216ENST00000583804 SLC25A17O43808 307 aa8.72□□□□□ -1.01
TOP3A-216ENST00000583804 HPRT1P00492 218 aa8.72□□□□□ -1.01
TOP3A-216ENST00000583804 HRASP01112 189 aa8.72□□□□□ -1.01
TOP3A-216ENST00000583804 OPN1MWP04001 364 aa8.72□□□□□ -1.01
TOP3A-216ENST00000583804 CRYBA1P05813 215 aa8.72□□□□□ -1.01
TOP3A-216ENST00000583804 OR9G9P0C7N8 305 aa8.72□□□□□ -1.01
TOP3A-216ENST00000583804 SAA1P0DJI8 122 aaPredicted RBP8.72□□□□□ -1.01
TOP3A-216ENST00000583804 OPN1MW2P0DN77 364 aa8.72□□□□□ -1.01
TOP3A-216ENST00000583804 OPN1MW3P0DN78 364 aa8.72□□□□□ -1.01
TOP3A-216ENST00000583804 PSG5Q15238 335 aa8.72□□□□□ -1.01
TOP3A-216ENST00000583804 ALKAL2Q6UX46 152 aa8.72□□□□□ -1.01
TOP3A-216ENST00000583804 Q6ZRM9 215 aa8.72□□□□□ -1.01
TOP3A-216ENST00000583804 H2BFWTQ7Z2G1 175 aa8.72□□□□□ -1.01
TOP3A-216ENST00000583804 C16orf82Q7Z2V1 217 aa8.72□□□□□ -1.01
TOP3A-216ENST00000583804 LRTM2Q8N967 370 aa8.72□□□□□ -1.01
TOP3A-216ENST00000583804 OR1S1Q8NH92 325 aa8.72□□□□□ -1.01
TOP3A-216ENST00000583804 THAP6Q8TBB0 222 aa8.72□□□□□ -1.01
TOP3A-216ENST00000583804 PPP1R1CQ8WVI7 109 aa8.72□□□□□ -1.01
TOP3A-216ENST00000583804 ST8SIA2Q92186 375 aa8.72□□□□□ -1.01
TOP3A-216ENST00000583804 RASL11BQ9BPW5 248 aa8.72□□□□□ -1.01
TOP3A-216ENST00000583804 MAGT1Q9H0U3 335 aa8.72□□□□□ -1.01
TOP3A-216ENST00000583804 METTL1Q9UBP6 276 aaKnown RBP8.72□□□□□ -1.01
TOP3A-216ENST00000583804 LSM5Q9Y4Y9 91 aaKnown RBP8.72□□□□□ -1.01
TOP3A-216ENST00000583804 SH2D7A6NKC9 451 aaPredicted RBP8.71□□□□□ -1.01
TOP3A-216ENST00000583804 M0QZK8 103 aa8.71□□□□□ -1.01
TOP3A-216ENST00000583804 RRHO14718 337 aa8.71□□□□□ -1.01
TOP3A-216ENST00000583804 FGF2P09038 288 aa8.71□□□□□ -1.01
TOP3A-216ENST00000583804 LYL1P12980 280 aa8.71□□□□□ -1.01
TOP3A-216ENST00000583804 NQO2P16083 231 aa8.71□□□□□ -1.01
TOP3A-216ENST00000583804 GNB1P62873 340 aa8.71□□□□□ -1.01
TOP3A-216ENST00000583804 BLCAPP62952 87 aa8.71□□□□□ -1.01
TOP3A-216ENST00000583804 VMA21Q3ZAQ7 101 aa8.71□□□□□ -1.01
TOP3A-216ENST00000583804 NMSQ5H8A3 153 aa8.71□□□□□ -1.01
TOP3A-216ENST00000583804 C9orf152Q5JTZ5 239 aa8.71□□□□□ -1.01
TOP3A-216ENST00000583804 OR4A47Q6IF82 309 aa8.71□□□□□ -1.01
TOP3A-216ENST00000583804 IL22RA2Q969J5 263 aa8.71□□□□□ -1.01
TOP3A-216ENST00000583804 AIFM2Q9BRQ8 373 aa8.71□□□□□ -1.01
TOP3A-216ENST00000583804 QTRT1Q9BXR0 403 aaKnown RBP8.71□□□□□ -1.01
TOP3A-216ENST00000583804 NPFFR1Q9GZQ6 430 aa8.71□□□□□ -1.01
TOP3A-216ENST00000583804 FBXL15Q9H469 300 aa8.71□□□□□ -1.01
TOP3A-216ENST00000583804 PLEKHA2Q9HB19 425 aa8.71□□□□□ -1.01
TOP3A-216ENST00000583804 TMED3Q9Y3Q3 217 aa8.71□□□□□ -1.01
TOP3A-216ENST00000583804 CUBNO60494 3623 aa8.71□□□□□ -1.02
TOP3A-216ENST00000583804 JMJD1CQ15652 2540 aa8.71□□□□□ -1.02
TOP3A-216ENST00000583804 KRBOX1C9JBD0 128 aa8.7□□□□□ -1.02
TOP3A-216ENST00000583804 KCNAB3O43448 404 aa8.7□□□□□ -1.02
TOP3A-216ENST00000583804 IGLV2-23P01705 113 aa8.7□□□□□ -1.02
TOP3A-216ENST00000583804 VDAC1P21796 283 aa8.7□□□□□ -1.02
TOP3A-216ENST00000583804 PSMB6P28072 239 aa8.7□□□□□ -1.02
TOP3A-216ENST00000583804 UBE2KP61086 200 aa8.7□□□□□ -1.02
TOP3A-216ENST00000583804 C5orf64Q2M2E5 130 aa8.7□□□□□ -1.02
TOP3A-216ENST00000583804 CXorf66Q5JRM2 361 aaPredicted RBP8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms