RNA–Protein interactions for RNA: ENST00000583708.5

UBBP4-201, Transcript of ubiquitin B pseudogene 4, humanhuman

BASIC

Gene UBBP4, Length 689 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-201ENST00000583708 RNASE11Q8TAA1 199 aaKnown RBP7.36□□□□□ -1.23
UBBP4-201ENST00000583708 ZNF431Q8TF32 576 aaPredicted RBP7.36□□□□□ -1.23
UBBP4-201ENST00000583708 ARPC1AQ92747 370 aa7.36□□□□□ -1.23
UBBP4-201ENST00000583708 GPHA2Q96T91 129 aa7.36□□□□□ -1.23
UBBP4-201ENST00000583708 ZNF430Q9H8G1 570 aaPredicted RBP7.36□□□□□ -1.23
UBBP4-201ENST00000583708 ZFP57Q9NU63 452 aa7.36□□□□□ -1.23
UBBP4-201ENST00000583708 TMEM14BQ9NUH8 114 aa7.36□□□□□ -1.23
UBBP4-201ENST00000583708 FOXA2Q9Y261 457 aaPredicted RBP7.36□□□□□ -1.23
UBBP4-201ENST00000583708 A0A1W2PN81 502 aa7.35□□□□□ -1.23
UBBP4-201ENST00000583708 C15orf61A6NNL5 157 aa7.35□□□□□ -1.23
UBBP4-201ENST00000583708 FAM90A26D6RGX4 464 aa7.35□□□□□ -1.23
UBBP4-201ENST00000583708 INS-IGF2F8WCM5 200 aa7.35□□□□□ -1.23
UBBP4-201ENST00000583708 FCN1O00602 326 aa7.35□□□□□ -1.23
UBBP4-201ENST00000583708 IGKV1-39P01597 117 aa7.35□□□□□ -1.23
UBBP4-201ENST00000583708 IGHG4P01861 327 aa7.35□□□□□ -1.23
UBBP4-201ENST00000583708 HLA-AP01891 365 aaKnown RBP7.35□□□□□ -1.23
UBBP4-201ENST00000583708 IGKV1D-39P04432 117 aa7.35□□□□□ -1.23
UBBP4-201ENST00000583708 TRAPPC2P0DI81 140 aa7.35□□□□□ -1.23
UBBP4-201ENST00000583708 TRAPPC2BP0DI82 140 aa7.35□□□□□ -1.23
UBBP4-201ENST00000583708 SULT1A3P0DMM9 295 aa7.35□□□□□ -1.23
UBBP4-201ENST00000583708 SULT1A4P0DMN0 295 aa7.35□□□□□ -1.23
UBBP4-201ENST00000583708 G6PCP35575 357 aa7.35□□□□□ -1.23
UBBP4-201ENST00000583708 CHRNA7P36544 502 aa7.35□□□□□ -1.23
UBBP4-201ENST00000583708 RPL27AP46776 148 aaKnown RBP7.35□□□□□ -1.23
UBBP4-201ENST00000583708 KLK9Q2XQG4 91 aa7.35□□□□□ -1.23
UBBP4-201ENST00000583708 PDLIM3Q53GG5 364 aaPredicted RBP7.35□□□□□ -1.23
UBBP4-201ENST00000583708 FBLN7Q53RD9 439 aa7.35□□□□□ -1.23
UBBP4-201ENST00000583708 AWAT1Q58HT5 328 aa7.35□□□□□ -1.23
UBBP4-201ENST00000583708 TEX38Q6PEX7 206 aa7.35□□□□□ -1.23
UBBP4-201ENST00000583708 STPG2Q8N412 459 aa7.35□□□□□ -1.23
UBBP4-201ENST00000583708 RNF152Q8N8N0 203 aa7.35□□□□□ -1.23
UBBP4-201ENST00000583708 PDCD10Q9BUL8 212 aa7.35□□□□□ -1.23
UBBP4-201ENST00000583708 ZNF747Q9BV97 191 aa7.35□□□□□ -1.23
UBBP4-201ENST00000583708 QTRT1Q9BXR0 403 aaKnown RBP7.35□□□□□ -1.23
UBBP4-201ENST00000583708 SLA2Q9H6Q3 261 aa7.35□□□□□ -1.23
UBBP4-201ENST00000583708 KLK9Q9UKQ9 250 aa7.35□□□□□ -1.23
UBBP4-201ENST00000583708 FLVCR2Q9UPI3 526 aa7.35□□□□□ -1.23
UBBP4-201ENST00000583708 TRAV6A0A075B6T7 132 aa7.34□□□□□ -1.23
UBBP4-201ENST00000583708 TRAV41A0A0B4J266 112 aa7.34□□□□□ -1.23
UBBP4-201ENST00000583708 PSMB11A5LHX3 300 aa7.34□□□□□ -1.23
UBBP4-201ENST00000583708 IGKV1-5P01602 117 aa7.34□□□□□ -1.23
UBBP4-201ENST00000583708 OPN1MWP04001 364 aa7.34□□□□□ -1.23
UBBP4-201ENST00000583708 OPN1MW2P0DN77 364 aa7.34□□□□□ -1.23
UBBP4-201ENST00000583708 OPN1MW3P0DN78 364 aa7.34□□□□□ -1.23
UBBP4-201ENST00000583708 HIST1H1BP16401 226 aaKnown RBP7.34□□□□□ -1.23
UBBP4-201ENST00000583708 ANXA7P20073 488 aaKnown RBP7.34□□□□□ -1.23
UBBP4-201ENST00000583708 SPCS3P61009 180 aa7.34□□□□□ -1.23
UBBP4-201ENST00000583708 FOXE3Q13461 319 aa7.34□□□□□ -1.23
UBBP4-201ENST00000583708 SMCO1Q147U7 214 aa7.34□□□□□ -1.23
UBBP4-201ENST00000583708 TNXAQ16473 311 aa7.34□□□□□ -1.23
UBBP4-201ENST00000583708 MRGPRG-AS1Q2M3A8 158 aa7.34□□□□□ -1.23
UBBP4-201ENST00000583708 C19orf54Q5BKX5 351 aa7.34□□□□□ -1.23
UBBP4-201ENST00000583708 NMSQ5H8A3 153 aa7.34□□□□□ -1.23
UBBP4-201ENST00000583708 C12orf54Q6X4T0 127 aa7.34□□□□□ -1.23
UBBP4-201ENST00000583708 SSX9Q7RTT3 188 aa7.34□□□□□ -1.23
UBBP4-201ENST00000583708 NOXA1Q86UR1 476 aa7.34□□□□□ -1.23
UBBP4-201ENST00000583708 VKORC1L1Q8N0U8 176 aa7.34□□□□□ -1.23
UBBP4-201ENST00000583708 C12orf45Q8N5I9 185 aaPredicted RBP7.34□□□□□ -1.23
UBBP4-201ENST00000583708 TTC9CQ8N5M4 171 aa7.34□□□□□ -1.23
UBBP4-201ENST00000583708 OR4X2Q8NGF9 303 aa7.34□□□□□ -1.23
UBBP4-201ENST00000583708 SPATA3Q8NHX4 192 aa7.34□□□□□ -1.23
UBBP4-201ENST00000583708 WIPF2Q8TF74 440 aaPredicted RBP7.34□□□□□ -1.23
UBBP4-201ENST00000583708 SRSF12Q8WXF0 261 aaKnown RBP7.34□□□□□ -1.23
UBBP4-201ENST00000583708 HSPB9Q9BQS6 159 aa7.34□□□□□ -1.23
UBBP4-201ENST00000583708 PARP11Q9NR21 331 aa7.34□□□□□ -1.23
UBBP4-201ENST00000583708 NDUFA4L2Q9NRX3 87 aa7.34□□□□□ -1.23
UBBP4-201ENST00000583708 OR51B2Q9Y5P1 312 aa7.34□□□□□ -1.23
UBBP4-201ENST00000583708 A0A0B4J293 547 aa7.33□□□□□ -1.24
UBBP4-201ENST00000583708 TEX50A0A1B0GTY4 177 aa7.33□□□□□ -1.24
UBBP4-201ENST00000583708 MSGN1A6NI15 193 aa7.33□□□□□ -1.24
UBBP4-201ENST00000583708 DBX1A6NMT0 343 aa7.33□□□□□ -1.24
UBBP4-201ENST00000583708 NPIPB5A8MRT5 1133 aa7.33□□□□□ -1.24
UBBP4-201ENST00000583708 RBMXL2O75526 392 aaKnown RBP7.33□□□□□ -1.24
UBBP4-201ENST00000583708 MED6O75586 246 aa7.33□□□□□ -1.24
UBBP4-201ENST00000583708 CRYGCP07315 174 aa7.33□□□□□ -1.24
UBBP4-201ENST00000583708 OR9G9P0C7N8 305 aa7.33□□□□□ -1.24
UBBP4-201ENST00000583708 EGR2P11161 476 aaPredicted RBP7.33□□□□□ -1.24
UBBP4-201ENST00000583708 MDKP21741 143 aaPredicted RBP7.33□□□□□ -1.24
UBBP4-201ENST00000583708 PPIFP30405 207 aaKnown RBP7.33□□□□□ -1.24
UBBP4-201ENST00000583708 OR2B8PP59922 312 aa7.33□□□□□ -1.24
UBBP4-201ENST00000583708 ERHP84090 104 aaKnown RBP7.33□□□□□ -1.24
UBBP4-201ENST00000583708 CYCSP99999 105 aaKnown RBP7.33□□□□□ -1.24
UBBP4-201ENST00000583708 CFHR3Q02985 330 aa7.33□□□□□ -1.24
UBBP4-201ENST00000583708 PJVKQ0ZLH3 352 aa7.33□□□□□ -1.24
UBBP4-201ENST00000583708 ANKRD55Q3KP44 614 aa7.33□□□□□ -1.24
UBBP4-201ENST00000583708 SHISA2Q6UWI4 295 aa7.33□□□□□ -1.24
UBBP4-201ENST00000583708 LYZL2Q7Z4W2 148 aa7.33□□□□□ -1.24
UBBP4-201ENST00000583708 SLC35G3Q8N808 338 aa7.33□□□□□ -1.24
UBBP4-201ENST00000583708 LHFPL5Q8TAF8 219 aa7.33□□□□□ -1.24
UBBP4-201ENST00000583708 FAM110DQ8TAY7 271 aaPredicted RBP7.33□□□□□ -1.24
UBBP4-201ENST00000583708 ABHD5Q8WTS1 349 aa7.33□□□□□ -1.24
UBBP4-201ENST00000583708 CASTOR1Q8WTX7 329 aa7.33□□□□□ -1.24
UBBP4-201ENST00000583708 USMG5Q96IX5 58 aa7.33□□□□□ -1.24
UBBP4-201ENST00000583708 CLCC1Q96S66 551 aa7.33□□□□□ -1.24
UBBP4-201ENST00000583708 THYN1Q9P016 225 aa7.33□□□□□ -1.24
UBBP4-201ENST00000583708 TNCP24821 2201 aa7.33□□□□□ -1.24
UBBP4-201ENST00000583708 FBN1P35555 2871 aaKnown RBP7.33□□□□□ -1.24
UBBP4-201ENST00000583708 A0A0G2JLM5 398 aa7.32□□□□□ -1.24
UBBP4-201ENST00000583708 C7orf66A4D0T2 115 aa7.32□□□□□ -1.24
UBBP4-201ENST00000583708 ATP6V0E1O15342 81 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms