RNA–Protein interactions for RNA: ENST00000581598.1

CCDC42-203, Transcript of coiled-coil domain containing 42, humanhuman

TSL 4

Gene CCDC42, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-203ENST00000581598 NDUFB6O95139 128 aa16.08■□□□□ 0.16
CCDC42-203ENST00000581598 DUTP33316 252 aaKnown RBP16.08■□□□□ 0.16
CCDC42-203ENST00000581598 FXYD4P59646 89 aa16.08■□□□□ 0.16
CCDC42-203ENST00000581598 MSMO1Q15800 293 aa16.08■□□□□ 0.16
CCDC42-203ENST00000581598 NRARPQ7Z6K4 114 aa16.08■□□□□ 0.16
CCDC42-203ENST00000581598 BVESQ8NE79 360 aa16.08■□□□□ 0.16
CCDC42-203ENST00000581598 DUSP18Q8NEJ0 188 aa16.08■□□□□ 0.16
CCDC42-203ENST00000581598 RANGRFQ9HD47 186 aaPredicted RBP16.08■□□□□ 0.16
CCDC42-203ENST00000581598 COPZ2Q9P299 210 aa16.08■□□□□ 0.16
CCDC42-203ENST00000581598 RBM7Q9Y580 266 aaKnown RBP16.08■□□□□ 0.16
CCDC42-203ENST00000581598 TNCP24821 2201 aa16.08■□□□□ 0.16
CCDC42-203ENST00000581598 FAM240BA0A1B0GVZ2 78 aa16.07■□□□□ 0.16
CCDC42-203ENST00000581598 SRRM4A7MD48 611 aaKnown RBP16.07■□□□□ 0.16
CCDC42-203ENST00000581598 SHOXO15266 292 aa16.07■□□□□ 0.16
CCDC42-203ENST00000581598 SPNP16150 400 aa16.07■□□□□ 0.16
CCDC42-203ENST00000581598 PJVKQ0ZLH3 352 aa16.07■□□□□ 0.16
CCDC42-203ENST00000581598 MRGPRG-AS1Q2M3A8 158 aa16.07■□□□□ 0.16
CCDC42-203ENST00000581598 RGS21Q2M5E4 152 aa16.07■□□□□ 0.16
CCDC42-203ENST00000581598 TEX45Q8NA69 505 aa16.07■□□□□ 0.16
CCDC42-203ENST00000581598 C13orf42A0A1B0GVH6 325 aa16.06■□□□□ 0.16
CCDC42-203ENST00000581598 IGLV2-14P01704 120 aa16.06■□□□□ 0.16
CCDC42-203ENST00000581598 TCRBP04435 133 aa16.06■□□□□ 0.16
CCDC42-203ENST00000581598 GP9P14770 177 aa16.06■□□□□ 0.16
CCDC42-203ENST00000581598 ZP3P21754 424 aa16.06■□□□□ 0.16
CCDC42-203ENST00000581598 UBE2KP61086 200 aa16.06■□□□□ 0.16
CCDC42-203ENST00000581598 VMA21Q3ZAQ7 101 aa16.06■□□□□ 0.16
CCDC42-203ENST00000581598 OR5T1Q8NG75 326 aa16.06■□□□□ 0.16
CCDC42-203ENST00000581598 OSR1Q8TAX0 266 aaPredicted RBP16.06■□□□□ 0.16
CCDC42-203ENST00000581598 ENKURQ8TC29 256 aa16.06■□□□□ 0.16
CCDC42-203ENST00000581598 MARCH1Q8TCQ1 289 aa16.06■□□□□ 0.16
CCDC42-203ENST00000581598 SECTM1Q8WVN6 248 aa16.06■□□□□ 0.16
CCDC42-203ENST00000581598 OR4C12Q96R67 309 aa16.06■□□□□ 0.16
CCDC42-203ENST00000581598 RSRP1Q9BUV0 290 aa16.06■□□□□ 0.16
CCDC42-203ENST00000581598 ELOVL1Q9BW60 279 aa16.06■□□□□ 0.16
CCDC42-203ENST00000581598 SLC5A7Q9GZV3 580 aa16.06■□□□□ 0.16
CCDC42-203ENST00000581598 ZNF355PQ9NSJ1 428 aa16.06■□□□□ 0.16
CCDC42-203ENST00000581598 GPR132Q9UNW8 380 aa16.06■□□□□ 0.16
CCDC42-203ENST00000581598 SLC22A5O76082 557 aa16.05■□□□□ 0.16
CCDC42-203ENST00000581598 GNRHRP30968 328 aa16.05■□□□□ 0.16
CCDC42-203ENST00000581598 LPCAT3Q6P1A2 487 aa16.05■□□□□ 0.16
CCDC42-203ENST00000581598 SLC38A6Q8IZM9 456 aa16.05■□□□□ 0.16
CCDC42-203ENST00000581598 ZNF645Q8N7E2 425 aa16.05■□□□□ 0.16
CCDC42-203ENST00000581598 SCGB3A2Q96PL1 93 aa16.05■□□□□ 0.16
CCDC42-203ENST00000581598 ASCL2Q99929 193 aa16.05■□□□□ 0.16
CCDC42-203ENST00000581598 STAB2Q8WWQ8 2551 aa16.05■□□□□ 0.16
CCDC42-203ENST00000581598 LINC00473A8K010 186 aa16.04■□□□□ 0.16
CCDC42-203ENST00000581598 CTSDP07339 412 aaPredicted RBP16.04■□□□□ 0.16
CCDC42-203ENST00000581598 PGAM2P15259 253 aa16.04■□□□□ 0.16
CCDC42-203ENST00000581598 OXA1LQ15070 435 aa16.04■□□□□ 0.16
CCDC42-203ENST00000581598 ZFAND1Q8TCF1 268 aa16.04■□□□□ 0.16
CCDC42-203ENST00000581598 ZNF486Q96H40 463 aaPredicted RBP16.04■□□□□ 0.16
CCDC42-203ENST00000581598 C5orf66Q9H5L9 145 aa16.04■□□□□ 0.16
CCDC42-203ENST00000581598 CCL28Q9NRJ3 127 aa16.04■□□□□ 0.16
CCDC42-203ENST00000581598 CRYZL1O95825 349 aa16.03■□□□□ 0.16
CCDC42-203ENST00000581598 EIF4EBP1Q13541 118 aaPredicted RBP16.03■□□□□ 0.16
CCDC42-203ENST00000581598 KLF5Q13887 457 aaPredicted RBP16.03■□□□□ 0.16
CCDC42-203ENST00000581598 PRSS8Q16651 343 aa16.03■□□□□ 0.16
CCDC42-203ENST00000581598 ZNF818PQ6ZRF7 136 aa16.03■□□□□ 0.16
CCDC42-203ENST00000581598 ZBTB34Q8NCN2 500 aa16.03■□□□□ 0.16
CCDC42-203ENST00000581598 USMG5Q96IX5 58 aa16.03■□□□□ 0.16
CCDC42-203ENST00000581598 RTBDNQ9BSG5 229 aaPredicted RBP16.03■□□□□ 0.16
CCDC42-203ENST00000581598 C20orf85Q9H1P6 137 aa16.03■□□□□ 0.16
CCDC42-203ENST00000581598 GPR31O00270 319 aa16.02■□□□□ 0.16
CCDC42-203ENST00000581598 IGLV1-51P01701 117 aa16.02■□□□□ 0.16
CCDC42-203ENST00000581598 RND3P61587 244 aa16.02■□□□□ 0.16
CCDC42-203ENST00000581598 ZNF343Q6P1L6 599 aa16.02■□□□□ 0.16
CCDC42-203ENST00000581598 NUDT15Q9NV35 164 aa16.02■□□□□ 0.16
CCDC42-203ENST00000581598 FLVCR2Q9UPI3 526 aa16.02■□□□□ 0.16
CCDC42-203ENST00000581598 MSGN1A6NI15 193 aa16.01■□□□□ 0.15
CCDC42-203ENST00000581598 CREBL2O60519 120 aaPredicted RBP16.01■□□□□ 0.15
CCDC42-203ENST00000581598 MECP2P51608 486 aaKnown RBP16.01■□□□□ 0.15
CCDC42-203ENST00000581598 PLET1Q6UQ28 207 aa16.01■□□□□ 0.15
CCDC42-203ENST00000581598 ADAD2Q8NCV1 583 aaKnown RBP16.01■□□□□ 0.15
CCDC42-203ENST00000581598 MARVELD1Q9BSK0 173 aa16.01■□□□□ 0.15
CCDC42-203ENST00000581598 SLC2A9Q9NRM0 540 aa16.01■□□□□ 0.15
CCDC42-203ENST00000581598 C14orf166Q9Y224 244 aaKnown RBP16.01■□□□□ 0.15
CCDC42-203ENST00000581598 OR9G9P0C7N8 305 aa16■□□□□ 0.15
CCDC42-203ENST00000581598 PI3P19957 117 aa16■□□□□ 0.15
CCDC42-203ENST00000581598 TNXAQ16473 311 aa16■□□□□ 0.15
CCDC42-203ENST00000581598 SBSPONQ8IVN8 264 aa16■□□□□ 0.15
CCDC42-203ENST00000581598 SRSF12Q8WXF0 261 aaKnown RBP16■□□□□ 0.15
CCDC42-203ENST00000581598 TMEM230Q96A57 120 aa16■□□□□ 0.15
CCDC42-203ENST00000581598 PHB2Q99623 299 aa16■□□□□ 0.15
CCDC42-203ENST00000581598 COA4Q9NYJ1 87 aa16■□□□□ 0.15
CCDC42-203ENST00000581598 PEF1Q9UBV8 284 aaKnown RBP16■□□□□ 0.15
CCDC42-203ENST00000581598 PRELID3BQ9Y3B1 194 aa16■□□□□ 0.15
CCDC42-203ENST00000581598 ANKRD34BA5PLL1 514 aa15.99■□□□□ 0.15
CCDC42-203ENST00000581598 H2AFB2P0C5Z0 115 aa15.99■□□□□ 0.15
CCDC42-203ENST00000581598 FRMD6-AS1P0C7T7 363 aa15.99■□□□□ 0.15
CCDC42-203ENST00000581598 SAA1P0DJI8 122 aaPredicted RBP15.99■□□□□ 0.15
CCDC42-203ENST00000581598 PIGPP57054 158 aa15.99■□□□□ 0.15
CCDC42-203ENST00000581598 TRIM16LQ309B1 348 aa15.99■□□□□ 0.15
CCDC42-203ENST00000581598 PHLDA2Q53GA4 152 aa15.99■□□□□ 0.15
CCDC42-203ENST00000581598 KCTD9Q7L273 389 aa15.99■□□□□ 0.15
CCDC42-203ENST00000581598 SLC25A42Q86VD7 318 aa15.99■□□□□ 0.15
CCDC42-203ENST00000581598 MMD2Q8IY49 270 aa15.99■□□□□ 0.15
CCDC42-203ENST00000581598 CMTM1Q8IZ96 169 aa15.99■□□□□ 0.15
CCDC42-203ENST00000581598 CENPSQ8N2Z9 138 aa15.99■□□□□ 0.15
CCDC42-203ENST00000581598 OR9G4Q8NGQ1 327 aa15.99■□□□□ 0.15
CCDC42-203ENST00000581598 TRAV6A0A075B6T7 132 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms