RNA–Protein interactions for RNA: ENST00000581113.6

NF1-220, Transcript of neurofibromin 1, humanhuman

TSL 5

Gene NF1, Length 1,464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-220ENST00000581113 CFAP46Q8IYW2 2715 aa2.82□□□□□ -1.96
NF1-220ENST00000581113 GCN1Q92616 2671 aaKnown RBP2.82□□□□□ -1.96
NF1-220ENST00000581113 IGHV3OR16-13A0A075B7E8 117 aa2.82□□□□□ -1.96
NF1-220ENST00000581113 hCG_1818297A0A087WSY0 165 aa2.82□□□□□ -1.96
NF1-220ENST00000581113 TRAV8-6A0A0B4J262 113 aa2.82□□□□□ -1.96
NF1-220ENST00000581113 LOC285095A0A1B0GVY8 99 aa2.82□□□□□ -1.96
NF1-220ENST00000581113 EEF1E1-BLOC1S5C9J1V9 151 aa2.82□□□□□ -1.96
NF1-220ENST00000581113 EEF1E1O43324 174 aaKnown RBP2.82□□□□□ -1.96
NF1-220ENST00000581113 NDUFS5O43920 106 aa2.82□□□□□ -1.96
NF1-220ENST00000581113 STK16O75716 305 aa2.82□□□□□ -1.96
NF1-220ENST00000581113 C6orf47O95873 294 aa2.82□□□□□ -1.96
NF1-220ENST00000581113 INSP01308 110 aa2.82□□□□□ -1.96
NF1-220ENST00000581113 IGKV3-11P04433 115 aa2.82□□□□□ -1.96
NF1-220ENST00000581113 ATP5G1P05496 136 aa2.82□□□□□ -1.96
NF1-220ENST00000581113 MMP7P09237 267 aaPredicted RBP2.82□□□□□ -1.96
NF1-220ENST00000581113 OR56A5P0C7T3 313 aa2.82□□□□□ -1.96
NF1-220ENST00000581113 C1GALT1C1LP0DN25 315 aa2.82□□□□□ -1.96
NF1-220ENST00000581113 NELFEP18615 380 aaKnown RBP2.82□□□□□ -1.96
NF1-220ENST00000581113 HIST1H1TP22492 207 aaPredicted RBP2.82□□□□□ -1.96
NF1-220ENST00000581113 PSMB9P28065 219 aa2.82□□□□□ -1.96
NF1-220ENST00000581113 FMO3P31513 532 aa2.82□□□□□ -1.96
NF1-220ENST00000581113 OR1E2P47887 323 aa2.82□□□□□ -1.96
NF1-220ENST00000581113 GFERP55789 205 aa2.82□□□□□ -1.96
NF1-220ENST00000581113 RAB5BP61020 215 aa2.82□□□□□ -1.96
NF1-220ENST00000581113 CKS1BP61024 79 aa2.82□□□□□ -1.96
NF1-220ENST00000581113 C1DQ13901 141 aaKnown RBP2.82□□□□□ -1.96
NF1-220ENST00000581113 PMVKQ15126 192 aa2.82□□□□□ -1.96
NF1-220ENST00000581113 TMEM236Q5W0B7 351 aa2.82□□□□□ -1.96
NF1-220ENST00000581113 FBXW9Q5XUX1 488 aa2.82□□□□□ -1.96
NF1-220ENST00000581113 STEAP4Q687X5 459 aa2.82□□□□□ -1.96
NF1-220ENST00000581113 Q6P435 159 aa2.82□□□□□ -1.96
NF1-220ENST00000581113 C4orf22Q6V702 233 aa2.82□□□□□ -1.96
NF1-220ENST00000581113 IDO2Q6ZQW0 420 aa2.82□□□□□ -1.96
NF1-220ENST00000581113 GRINAQ7Z429 371 aa2.82□□□□□ -1.96
NF1-220ENST00000581113 FAM71E2Q8N5Q1 922 aa2.82□□□□□ -1.96
NF1-220ENST00000581113 OR51A2Q8NGJ7 313 aa2.82□□□□□ -1.96
NF1-220ENST00000581113 DCUN1D1Q96GG9 259 aa2.82□□□□□ -1.96
NF1-220ENST00000581113 PITX2Q99697 317 aa2.82□□□□□ -1.96
NF1-220ENST00000581113 SUCNR1Q9BXA5 334 aa2.82□□□□□ -1.96
NF1-220ENST00000581113 RSPO3Q9BXY4 272 aaPredicted RBP2.82□□□□□ -1.96
NF1-220ENST00000581113 MS4A8Q9BY19 250 aa2.82□□□□□ -1.96
NF1-220ENST00000581113 GABARAPL3Q9BY60 117 aa2.82□□□□□ -1.96
NF1-220ENST00000581113 GNB1LQ9BYB4 327 aa2.82□□□□□ -1.96
NF1-220ENST00000581113 KRTAP4-4Q9BYR3 166 aa2.82□□□□□ -1.96
NF1-220ENST00000581113 AIG1Q9NVV5 245 aa2.82□□□□□ -1.96
NF1-220ENST00000581113 ZNF226Q9NYT6 803 aa2.82□□□□□ -1.96
NF1-220ENST00000581113 RBM12B-AS1Q9P1G2 102 aa2.82□□□□□ -1.96
NF1-220ENST00000581113 CLCF1Q9UBD9 225 aa2.82□□□□□ -1.96
NF1-220ENST00000581113 SLC23A2Q9UGH3 650 aa2.82□□□□□ -1.96
NF1-220ENST00000581113 ZNF780BQ9Y6R6 833 aa2.82□□□□□ -1.96
NF1-220ENST00000581113 ATMQ13315 3056 aa2.81□□□□□ -1.96
NF1-220ENST00000581113 UNC13CQ8NB66 2214 aa2.81□□□□□ -1.96
NF1-220ENST00000581113 SHROOM3Q8TF72 1996 aa2.81□□□□□ -1.96
NF1-220ENST00000581113 ANKRD36A6QL64 1941 aa2.81□□□□□ -1.96
NF1-220ENST00000581113 COL6A6A6NMZ7 2263 aa2.81□□□□□ -1.96
NF1-220ENST00000581113 TRAV8-2A0A0B4J237 113 aa2.81□□□□□ -1.96
NF1-220ENST00000581113 GMNCA6NCL1 334 aa2.81□□□□□ -1.96
NF1-220ENST00000581113 CCDC160A6NGH7 325 aa2.81□□□□□ -1.96
NF1-220ENST00000581113 APOC4-APOC2K7ER74 178 aa2.81□□□□□ -1.96
NF1-220ENST00000581113 FAAHO00519 579 aa2.81□□□□□ -1.96
NF1-220ENST00000581113 AGPAT2O15120 278 aa2.81□□□□□ -1.96
NF1-220ENST00000581113 BET1O15155 118 aa2.81□□□□□ -1.96
NF1-220ENST00000581113 HMGB3O15347 200 aaKnown RBP2.81□□□□□ -1.96
NF1-220ENST00000581113 EIF1BO60739 113 aaKnown RBP2.81□□□□□ -1.96
NF1-220ENST00000581113 POP7O75817 140 aaKnown RBP2.81□□□□□ -1.96
NF1-220ENST00000581113 UPK1BO75841 260 aa2.81□□□□□ -1.96
NF1-220ENST00000581113 PTHP01270 115 aa2.81□□□□□ -1.96
NF1-220ENST00000581113 APOC2P02655 101 aa2.81□□□□□ -1.96
NF1-220ENST00000581113 CD79AP11912 226 aa2.81□□□□□ -1.96
NF1-220ENST00000581113 MYL9P24844 172 aa2.81□□□□□ -1.96
NF1-220ENST00000581113 CD34P28906 385 aa2.81□□□□□ -1.96
NF1-220ENST00000581113 CA5AP35218 305 aa2.81□□□□□ -1.96
NF1-220ENST00000581113 EIF1P41567 113 aaKnown RBP2.81□□□□□ -1.96
NF1-220ENST00000581113 MARCKSL1P49006 195 aa2.81□□□□□ -1.96
NF1-220ENST00000581113 NCBP2P52298 156 aaKnown RBP eCLIP2.81□□□□□ -1.96
NF1-220ENST00000581113 RBMY1FQ15415 496 aaKnown RBP2.81□□□□□ -1.96
NF1-220ENST00000581113 DEFB109BQ30KR1 87 aa2.81□□□□□ -1.96
NF1-220ENST00000581113 KLHL12Q53G59 568 aa2.81□□□□□ -1.96
NF1-220ENST00000581113 TSPO2Q5TGU0 170 aa2.81□□□□□ -1.96
NF1-220ENST00000581113 SAMD13Q5VXD3 122 aa2.81□□□□□ -1.96
NF1-220ENST00000581113 OPN5Q6U736 354 aa2.81□□□□□ -1.96
NF1-220ENST00000581113 OSR2Q8N2R0 312 aa2.81□□□□□ -1.96
NF1-220ENST00000581113 MCFD2Q8NI22 146 aa2.81□□□□□ -1.96
NF1-220ENST00000581113 CCL17Q92583 94 aa2.81□□□□□ -1.96
NF1-220ENST00000581113 LINC01587Q99440 93 aa2.81□□□□□ -1.96
NF1-220ENST00000581113 CCDC32Q9BV29 185 aa2.81□□□□□ -1.96
NF1-220ENST00000581113 ULBP3Q9BZM4 244 aa2.81□□□□□ -1.96
NF1-220ENST00000581113 SLC25A31Q9H0C2 315 aa2.81□□□□□ -1.96
NF1-220ENST00000581113 SRMSQ9H3Y6 488 aa2.81□□□□□ -1.96
NF1-220ENST00000581113 SLC25A22Q9H936 323 aa2.81□□□□□ -1.96
NF1-220ENST00000581113 LRTM1Q9HBL6 345 aa2.81□□□□□ -1.96
NF1-220ENST00000581113 UQCC1Q9NVA1 299 aa2.81□□□□□ -1.96
NF1-220ENST00000581113 TAS2R1Q9NYW7 299 aa2.81□□□□□ -1.96
NF1-220ENST00000581113 PCYOX1Q9UHG3 505 aa2.81□□□□□ -1.96
NF1-220ENST00000581113 HDGFL3Q9Y3E1 203 aa2.81□□□□□ -1.96
NF1-220ENST00000581113 INSIG2Q9Y5U4 225 aa2.81□□□□□ -1.96
NF1-220ENST00000581113 KCNE3Q9Y6H6 103 aa2.81□□□□□ -1.96
NF1-220ENST00000581113 WSB1Q9Y6I7 421 aa2.81□□□□□ -1.96
NF1-220ENST00000581113 FLNBO75369 2602 aaKnown RBP2.81□□□□□ -1.96
NF1-220ENST00000581113 RAI1Q7Z5J4 1906 aaPredicted RBP2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms