RNA–Protein interactions for RNA: ENST00000578706.5

UBB-208, Transcript of ubiquitin B, human

TSL 3

Gene UBB, Length 500 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBB-208	ENST00000578706	STPG2	Q8N412	459 aa		4.99	□□□□□ -1.61
UBB-208	ENST00000578706	FGFRL1	Q8N441	504 aa		4.99	□□□□□ -1.61
UBB-208	ENST00000578706	ZNF645	Q8N7E2	425 aa		4.99	□□□□□ -1.61
UBB-208	ENST00000578706	DMBX1	Q8NFW5	382 aa		4.99	□□□□□ -1.61
UBB-208	ENST00000578706	OR52M1	Q8NGK5	317 aa		4.99	□□□□□ -1.61
UBB-208	ENST00000578706	TMED6	Q8WW62	240 aa		4.99	□□□□□ -1.61
UBB-208	ENST00000578706	H1FX	Q92522	213 aa	Known RBP	4.99	□□□□□ -1.61
UBB-208	ENST00000578706	ARL11	Q969Q4	196 aa		4.99	□□□□□ -1.61
UBB-208	ENST00000578706	MARC2	Q969Z3	335 aa		4.99	□□□□□ -1.61
UBB-208	ENST00000578706	COQ2	Q96H96	371 aa		4.99	□□□□□ -1.61
UBB-208	ENST00000578706	SNX22	Q96L94	193 aa		4.99	□□□□□ -1.61
UBB-208	ENST00000578706	SLC25A31	Q9H0C2	315 aa		4.99	□□□□□ -1.61
UBB-208	ENST00000578706	ARV1	Q9H2C2	271 aa		4.99	□□□□□ -1.61
UBB-208	ENST00000578706	C11orf1	Q9H5F2	150 aa		4.99	□□□□□ -1.61
UBB-208	ENST00000578706	EDA2R	Q9HAV5	297 aa		4.99	□□□□□ -1.61
UBB-208	ENST00000578706	OR2S2	Q9NQN1	319 aa		4.99	□□□□□ -1.61
UBB-208	ENST00000578706	TAS2R3	Q9NYW6	316 aa		4.99	□□□□□ -1.61
UBB-208	ENST00000578706	RCL1	Q9Y2P8	373 aa	Known RBP	4.99	□□□□□ -1.61
UBB-208	ENST00000578706	RBM7	Q9Y580	266 aa	Known RBP	4.99	□□□□□ -1.61
UBB-208	ENST00000578706	TSSC4	Q9Y5U2	329 aa	Predicted RBP	4.99	□□□□□ -1.61
UBB-208	ENST00000578706	TRAV39	A0A0B4J263	110 aa		4.98	□□□□□ -1.61
UBB-208	ENST00000578706	WRB	O00258	174 aa		4.98	□□□□□ -1.61
UBB-208	ENST00000578706	TNFSF12	O43508	249 aa		4.98	□□□□□ -1.61
UBB-208	ENST00000578706	PITX3	O75364	302 aa		4.98	□□□□□ -1.61
UBB-208	ENST00000578706	ZNF737	O75373	536 aa		4.98	□□□□□ -1.61
UBB-208	ENST00000578706	IGLV2-14	P01704	120 aa		4.98	□□□□□ -1.61
UBB-208	ENST00000578706	OR8U9	P0C7N5	309 aa		4.98	□□□□□ -1.61
UBB-208	ENST00000578706	SEC11B	P0C7V7	166 aa		4.98	□□□□□ -1.61
UBB-208	ENST00000578706	PSG2	P11465	335 aa		4.98	□□□□□ -1.61
UBB-208	ENST00000578706	VDAC2	P45880	294 aa	Predicted RBP	4.98	□□□□□ -1.61
UBB-208	ENST00000578706	SULT1A2	P50226	295 aa		4.98	□□□□□ -1.61
UBB-208	ENST00000578706	RAB5C	P51148	216 aa		4.98	□□□□□ -1.61
UBB-208	ENST00000578706	LGALS4	P56470	323 aa		4.98	□□□□□ -1.61
UBB-208	ENST00000578706	EWSR1	Q01844	656 aa	Known RBP eCLIP	4.98	□□□□□ -1.61
UBB-208	ENST00000578706	BAX	Q07812	192 aa		4.98	□□□□□ -1.61
UBB-208	ENST00000578706	AES	Q08117	197 aa		4.98	□□□□□ -1.61
UBB-208	ENST00000578706	CATR1	Q13166	79 aa		4.98	□□□□□ -1.61
UBB-208	ENST00000578706	ZNF266	Q14584	549 aa		4.98	□□□□□ -1.61
UBB-208	ENST00000578706	DUX4L9	Q6RFH8	374 aa	Predicted RBP	4.98	□□□□□ -1.61
UBB-208	ENST00000578706	SBSPON	Q8IVN8	264 aa		4.98	□□□□□ -1.61
UBB-208	ENST00000578706	FAM219A	Q8IW50	185 aa		4.98	□□□□□ -1.61
UBB-208	ENST00000578706	PRR18	Q8N4B5	295 aa		4.98	□□□□□ -1.61
UBB-208	ENST00000578706	OR2C3	Q8N628	320 aa		4.98	□□□□□ -1.61
UBB-208	ENST00000578706	DRAM1	Q8N682	238 aa		4.98	□□□□□ -1.61
UBB-208	ENST00000578706	CD177	Q8N6Q3	437 aa		4.98	□□□□□ -1.61
UBB-208	ENST00000578706	FAM216B	Q8N7L0	139 aa		4.98	□□□□□ -1.61
UBB-208	ENST00000578706	LINC00482	Q8N8I6	264 aa		4.98	□□□□□ -1.61
UBB-208	ENST00000578706	OR8U1	Q8NH10	309 aa		4.98	□□□□□ -1.61
UBB-208	ENST00000578706	OR51H1	Q8NH63	302 aa		4.98	□□□□□ -1.61
UBB-208	ENST00000578706	OR1L1	Q8NH94	360 aa		4.98	□□□□□ -1.61
UBB-208	ENST00000578706	RNASE11	Q8TAA1	199 aa	Known RBP	4.98	□□□□□ -1.61
UBB-208	ENST00000578706	PIFO	Q8TCI5	191 aa		4.98	□□□□□ -1.61
UBB-208	ENST00000578706	EDARADD	Q8WWZ3	215 aa		4.98	□□□□□ -1.61
UBB-208	ENST00000578706	SMIM8	Q96KF7	97 aa		4.98	□□□□□ -1.61
UBB-208	ENST00000578706	PRR25	Q96S07	402 aa		4.98	□□□□□ -1.61
UBB-208	ENST00000578706	RAB40C	Q96S21	281 aa		4.98	□□□□□ -1.61
UBB-208	ENST00000578706	GINS3	Q9BRX5	216 aa		4.98	□□□□□ -1.61
UBB-208	ENST00000578706	MCRIP2	Q9BUT9	160 aa	Known RBP	4.98	□□□□□ -1.61
UBB-208	ENST00000578706	LYRM2	Q9NU23	88 aa	Predicted RBP	4.98	□□□□□ -1.61
UBB-208	ENST00000578706	JPT1	Q9UK76	154 aa		4.98	□□□□□ -1.61
UBB-208	ENST00000578706	PITPNC1	Q9UKF7	332 aa		4.98	□□□□□ -1.61
UBB-208	ENST00000578706	IGKV1D-17	A0A075B6S4	117 aa		4.97	□□□□□ -1.61
UBB-208	ENST00000578706	ODAM	A1E959	279 aa		4.97	□□□□□ -1.61
UBB-208	ENST00000578706		A6NJY4	79 aa		4.97	□□□□□ -1.61
UBB-208	ENST00000578706	ZNF705E	A8MWA4	302 aa	Predicted RBP	4.97	□□□□□ -1.61
UBB-208	ENST00000578706	FAM90A26	D6RGX4	464 aa		4.97	□□□□□ -1.61
UBB-208	ENST00000578706	C15orf65	H3BRN8	121 aa		4.97	□□□□□ -1.61
UBB-208	ENST00000578706		K7N7A8	449 aa		4.97	□□□□□ -1.61
UBB-208	ENST00000578706	ITGB1BP1	O14713	200 aa		4.97	□□□□□ -1.61
UBB-208	ENST00000578706	SSSCA1	O60232	199 aa		4.97	□□□□□ -1.61
UBB-208	ENST00000578706	RAMP3	O60896	148 aa		4.97	□□□□□ -1.61
UBB-208	ENST00000578706	CRYZL1	O95825	349 aa		4.97	□□□□□ -1.61
UBB-208	ENST00000578706	M6PR	P20645	277 aa		4.97	□□□□□ -1.61
UBB-208	ENST00000578706	PAX6	P26367	422 aa		4.97	□□□□□ -1.61
UBB-208	ENST00000578706	GLIPR1	P48060	266 aa		4.97	□□□□□ -1.61
UBB-208	ENST00000578706	RAB13	P51153	203 aa		4.97	□□□□□ -1.61
UBB-208	ENST00000578706	CAV2	P51636	162 aa		4.97	□□□□□ -1.61
UBB-208	ENST00000578706	AKR1C2	P52895	323 aa		4.97	□□□□□ -1.61
UBB-208	ENST00000578706	TAS2R30	P59541	319 aa		4.97	□□□□□ -1.61
UBB-208	ENST00000578706	POLR2G	P62487	172 aa	Known RBP eCLIP	4.97	□□□□□ -1.61
UBB-208	ENST00000578706	RPL23A	P62750	156 aa	Known RBP	4.97	□□□□□ -1.61
UBB-208	ENST00000578706	BLCAP	P62952	87 aa		4.97	□□□□□ -1.61
UBB-208	ENST00000578706	TMEM30B	Q3MIR4	351 aa		4.97	□□□□□ -1.61
UBB-208	ENST00000578706	CXorf66	Q5JRM2	361 aa	Predicted RBP	4.97	□□□□□ -1.61
UBB-208	ENST00000578706	HCP5	Q6MZN7	132 aa		4.97	□□□□□ -1.61
UBB-208	ENST00000578706	ZNF66	Q6ZN08	573 aa		4.97	□□□□□ -1.61
UBB-208	ENST00000578706	ETV3L	Q6ZN32	361 aa		4.97	□□□□□ -1.61
UBB-208	ENST00000578706	ZNF561	Q8N587	486 aa		4.97	□□□□□ -1.61
UBB-208	ENST00000578706	COMMD1	Q8N668	190 aa		4.97	□□□□□ -1.61
UBB-208	ENST00000578706	OR1S2	Q8NGQ3	325 aa		4.97	□□□□□ -1.61
UBB-208	ENST00000578706	OR13A1	Q8NGR1	328 aa		4.97	□□□□□ -1.61
UBB-208	ENST00000578706	MRGPRD	Q8TDS7	321 aa		4.97	□□□□□ -1.61
UBB-208	ENST00000578706	DDB2	Q92466	427 aa		4.97	□□□□□ -1.61
UBB-208	ENST00000578706	GPR146	Q96CH1	333 aa		4.97	□□□□□ -1.61
UBB-208	ENST00000578706	SDSL	Q96GA7	329 aa		4.97	□□□□□ -1.61
UBB-208	ENST00000578706	AJUBA	Q96IF1	538 aa		4.97	□□□□□ -1.61
UBB-208	ENST00000578706	LINC00052	Q96N35	136 aa		4.97	□□□□□ -1.61
UBB-208	ENST00000578706	HSD17B10	Q99714	261 aa	Known RBP	4.97	□□□□□ -1.61
UBB-208	ENST00000578706	OR2D2	Q9H210	308 aa		4.97	□□□□□ -1.61
UBB-208	ENST00000578706	PARP11	Q9NR21	331 aa		4.97	□□□□□ -1.61

Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms