RNA–Protein interactions for RNA: ENST00000578373.5

ERBB2-206, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 4,523 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-206ENST00000578373 DMRT1Q9Y5R6 373 aa10.16□□□□□ -0.78
ERBB2-206ENST00000578373 S4R3C0 116 aa10.16□□□□□ -0.78
ERBB2-206ENST00000578373 PRRC2CQ9Y520 2896 aaKnown RBP10.16□□□□□ -0.78
ERBB2-206ENST00000578373 SCO2A0A1W2PP80 73 aa10.15□□□□□ -0.78
ERBB2-206ENST00000578373 QRFPP83859 136 aa10.15□□□□□ -0.78
ERBB2-206ENST00000578373 MMD2Q8IY49 270 aa10.15□□□□□ -0.78
ERBB2-206ENST00000578373 RAB1CQ92928 201 aa10.15□□□□□ -0.78
ERBB2-206ENST00000578373 NABP2Q9BQ15 211 aa10.15□□□□□ -0.78
ERBB2-206ENST00000578373 PNRC2Q9NPJ4 139 aaKnown RBP10.15□□□□□ -0.78
ERBB2-206ENST00000578373 UFC1Q9Y3C8 167 aa10.15□□□□□ -0.78
ERBB2-206ENST00000578373 CD5P06127 495 aa10.15□□□□□ -0.78
ERBB2-206ENST00000578373 PRSS1P07477 247 aa10.15□□□□□ -0.78
ERBB2-206ENST00000578373 C1QTNF9P0C862 333 aa10.15□□□□□ -0.78
ERBB2-206ENST00000578373 RPL8P62917 257 aaKnown RBP10.15□□□□□ -0.78
ERBB2-206ENST00000578373 FAM216BQ8N7L0 139 aa10.15□□□□□ -0.78
ERBB2-206ENST00000578373 TMEM171Q8WVE6 324 aa10.15□□□□□ -0.78
ERBB2-206ENST00000578373 GOLT1BQ9Y3E0 138 aa10.15□□□□□ -0.78
ERBB2-206ENST00000578373 ARHGAP21Q5T5U3 1957 aa10.15□□□□□ -0.78
ERBB2-206ENST00000578373 SMPD2O60906 423 aa10.15□□□□□ -0.78
ERBB2-206ENST00000578373 MOSP00540 346 aa10.15□□□□□ -0.78
ERBB2-206ENST00000578373 CA2P00918 260 aa10.15□□□□□ -0.78
ERBB2-206ENST00000578373 OR4A8P0C604 315 aa10.15□□□□□ -0.78
ERBB2-206ENST00000578373 FTH1P19P0C7X4 201 aa10.15□□□□□ -0.78
ERBB2-206ENST00000578373 PTGDSP41222 190 aa10.15□□□□□ -0.78
ERBB2-206ENST00000578373 ID3Q02535 119 aa10.15□□□□□ -0.78
ERBB2-206ENST00000578373 FAM27E3Q08E93 113 aa10.15□□□□□ -0.78
ERBB2-206ENST00000578373 MKI67P46013 3256 aaKnown RBP10.15□□□□□ -0.78
ERBB2-206ENST00000578373 DENND4CQ5VZ89 1909 aa10.15□□□□□ -0.78
ERBB2-206ENST00000578373 FBLL1A6NHQ2 334 aaKnown RBP10.15□□□□□ -0.79
ERBB2-206ENST00000578373 PRR33A8MZF0 331 aa10.15□□□□□ -0.79
ERBB2-206ENST00000578373 HOXA5P20719 270 aa10.15□□□□□ -0.79
ERBB2-206ENST00000578373 CRYGSP22914 178 aa10.15□□□□□ -0.79
ERBB2-206ENST00000578373 SDF2L1Q9HCN8 221 aa10.15□□□□□ -0.79
ERBB2-206ENST00000578373 TNFRSF19Q9NS68 423 aa10.15□□□□□ -0.79
ERBB2-206ENST00000578373 YTHDF2Q9Y5A9 579 aaKnown RBP10.15□□□□□ -0.79
ERBB2-206ENST00000578373 TMEM56-RWDD3S4R434 201 aa10.15□□□□□ -0.79
ERBB2-206ENST00000578373 IGFBP2P18065 325 aa10.14□□□□□ -0.79
ERBB2-206ENST00000578373 NEU1Q99519 415 aa10.14□□□□□ -0.79
ERBB2-206ENST00000578373 WNT10AQ9GZT5 417 aa10.14□□□□□ -0.79
ERBB2-206ENST00000578373 PLSCR2Q9NRY7 297 aa10.14□□□□□ -0.79
ERBB2-206ENST00000578373 AUP1Q9Y679 476 aa10.14□□□□□ -0.79
ERBB2-206ENST00000578373 FAM90A26D6RGX4 464 aa10.14□□□□□ -0.79
ERBB2-206ENST00000578373 SMIM17P0DL12 118 aa10.14□□□□□ -0.79
ERBB2-206ENST00000578373 COX5BP10606 129 aa10.14□□□□□ -0.79
ERBB2-206ENST00000578373 CEACAM3P40198 252 aa10.14□□□□□ -0.79
ERBB2-206ENST00000578373 SFRP2Q96HF1 295 aa10.14□□□□□ -0.79
ERBB2-206ENST00000578373 MS4A5Q9H3V2 200 aa10.14□□□□□ -0.79
ERBB2-206ENST00000578373 FOXD3Q9UJU5 478 aaPredicted RBP10.14□□□□□ -0.79
ERBB2-206ENST00000578373 C2CD3Q4AC94 2353 aa10.14□□□□□ -0.79
ERBB2-206ENST00000578373 SONP18583 2426 aaKnown RBP10.14□□□□□ -0.79
ERBB2-206ENST00000578373 TRBV6-7A0A0A0MS04 114 aa10.14□□□□□ -0.79
ERBB2-206ENST00000578373 CGB1A6NKQ9 187 aa10.14□□□□□ -0.79
ERBB2-206ENST00000578373 CSRP2Q16527 193 aa10.14□□□□□ -0.79
ERBB2-206ENST00000578373 ZNF714Q96N38 554 aa10.14□□□□□ -0.79
ERBB2-206ENST00000578373 COA4Q9NYJ1 87 aa10.14□□□□□ -0.79
ERBB2-206ENST00000578373 BRCA2P51587 3418 aa10.14□□□□□ -0.79
ERBB2-206ENST00000578373 SELLP14151 372 aa10.14□□□□□ -0.79
ERBB2-206ENST00000578373 GCHFRP30047 84 aa10.14□□□□□ -0.79
ERBB2-206ENST00000578373 ERVFRD-1P60508 538 aa10.14□□□□□ -0.79
ERBB2-206ENST00000578373 RPL23P62829 140 aaKnown RBP10.14□□□□□ -0.79
ERBB2-206ENST00000578373 P2RY6Q15077 328 aa10.14□□□□□ -0.79
ERBB2-206ENST00000578373 CENPWQ5EE01 88 aa10.14□□□□□ -0.79
ERBB2-206ENST00000578373 CYP2G1PQ6ZSU1 146 aa10.14□□□□□ -0.79
ERBB2-206ENST00000578373 PSMG3Q9BT73 122 aaPredicted RBP10.14□□□□□ -0.79
ERBB2-206ENST00000578373 THSD7BQ9C0I4 1608 aa10.13□□□□□ -0.79
ERBB2-206ENST00000578373 MUC21A0A0G2JKD1 596 aa10.13□□□□□ -0.79
ERBB2-206ENST00000578373 MUC21A0A140T8X8 626 aa10.13□□□□□ -0.79
ERBB2-206ENST00000578373 F5H697 171 aa10.13□□□□□ -0.79
ERBB2-206ENST00000578373 TMEM250H0YL14 139 aa10.13□□□□□ -0.79
ERBB2-206ENST00000578373 MPDU1O75352 247 aa10.13□□□□□ -0.79
ERBB2-206ENST00000578373 GOSR1O95249 250 aa10.13□□□□□ -0.79
ERBB2-206ENST00000578373 CD33P20138 364 aa10.13□□□□□ -0.79
ERBB2-206ENST00000578373 RPL27AP46776 148 aaKnown RBP10.13□□□□□ -0.79
ERBB2-206ENST00000578373 LHX2P50458 406 aa10.13□□□□□ -0.79
ERBB2-206ENST00000578373 MUC21Q5SSG8 566 aa10.13□□□□□ -0.79
ERBB2-206ENST00000578373 ZNF600Q6ZNG1 722 aa10.13□□□□□ -0.79
ERBB2-206ENST00000578373 FAM19A2Q8N3H0 131 aa10.13□□□□□ -0.79
ERBB2-206ENST00000578373 PGLYRP4Q96LB8 373 aa10.13□□□□□ -0.79
ERBB2-206ENST00000578373 CBY1Q9Y3M2 126 aa10.13□□□□□ -0.79
ERBB2-206ENST00000578373 IGHV3OR16-8A0A075B7F1 116 aa10.13□□□□□ -0.79
ERBB2-206ENST00000578373 RPLP1P05386 114 aaKnown RBP10.13□□□□□ -0.79
ERBB2-206ENST00000578373 HIST1H1EP10412 219 aaKnown RBP10.13□□□□□ -0.79
ERBB2-206ENST00000578373 IGHV1-2P23083 117 aa10.13□□□□□ -0.79
ERBB2-206ENST00000578373 CTSSP25774 331 aa10.13□□□□□ -0.79
ERBB2-206ENST00000578373 SRP14P37108 136 aaKnown RBP10.13□□□□□ -0.79
ERBB2-206ENST00000578373 CLDN18P56856 261 aa10.13□□□□□ -0.79
ERBB2-206ENST00000578373 HOXA4Q00056 320 aaPredicted RBP10.13□□□□□ -0.79
ERBB2-206ENST00000578373 OR4D5Q8NGN0 318 aa10.13□□□□□ -0.79
ERBB2-206ENST00000578373 PERPQ96FX8 193 aa10.13□□□□□ -0.79
ERBB2-206ENST00000578373 RAB1BQ9H0U4 201 aa10.13□□□□□ -0.79
ERBB2-206ENST00000578373 AMMECR1Q9Y4X0 333 aaPredicted RBP10.13□□□□□ -0.79
ERBB2-206ENST00000578373 IGHV3OR16-13A0A075B7E8 117 aa10.13□□□□□ -0.79
ERBB2-206ENST00000578373 IGHV3-74A0A0B4J1X5 117 aa10.13□□□□□ -0.79
ERBB2-206ENST00000578373 HYPMO75409 117 aa10.13□□□□□ -0.79
ERBB2-206ENST00000578373 CD40P25942 277 aa10.13□□□□□ -0.79
ERBB2-206ENST00000578373 ACP7Q6ZNF0 438 aa10.13□□□□□ -0.79
ERBB2-206ENST00000578373 LHFPL4Q7Z7J7 247 aa10.13□□□□□ -0.79
ERBB2-206ENST00000578373 C9orf172C9J069 976 aa10.12□□□□□ -0.79
ERBB2-206ENST00000578373 ACP1P24666 158 aa10.12□□□□□ -0.79
ERBB2-206ENST00000578373 Q6ZT83 130 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms