RNA–Protein interactions for RNA: ENST00000578112.5

SMARCE1-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,384 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-214ENST00000578112 FCGR3AP08637 254 aa8.47□□□□□ -1.05
SMARCE1-214ENST00000578112 DTYMKP23919 212 aa8.47□□□□□ -1.05
SMARCE1-214ENST00000578112 CD300EQ496F6 205 aaPredicted RBP8.47□□□□□ -1.05
SMARCE1-214ENST00000578112 H1FOOQ8IZA3 346 aaPredicted RBP8.47□□□□□ -1.05
SMARCE1-214ENST00000578112 LRRC20Q8TCA0 184 aa8.47□□□□□ -1.05
SMARCE1-214ENST00000578112 SRSF8Q9BRL6 282 aaKnown RBP8.47□□□□□ -1.05
SMARCE1-214ENST00000578112 HDHD3Q9BSH5 251 aaPredicted RBP8.47□□□□□ -1.05
SMARCE1-214ENST00000578112 RBMY1BA6NDE4 496 aaKnown RBP8.47□□□□□ -1.05
SMARCE1-214ENST00000578112 RBMY1EA6NEQ0 496 aaKnown RBP8.47□□□□□ -1.05
SMARCE1-214ENST00000578112 CCDC160A6NGH7 325 aa8.47□□□□□ -1.05
SMARCE1-214ENST00000578112 C2orf70A6NJV1 201 aa8.47□□□□□ -1.05
SMARCE1-214ENST00000578112 ACTL6BO94805 426 aa8.47□□□□□ -1.05
SMARCE1-214ENST00000578112 RBMY1DP0C7P1 496 aaKnown RBP8.47□□□□□ -1.05
SMARCE1-214ENST00000578112 TNXAQ16473 311 aa8.47□□□□□ -1.05
SMARCE1-214ENST00000578112 OR4A5Q8NH83 315 aa8.47□□□□□ -1.05
SMARCE1-214ENST00000578112 FAM3DQ96BQ1 224 aa8.47□□□□□ -1.05
SMARCE1-214ENST00000578112 ACOT13Q9NPJ3 140 aa8.47□□□□□ -1.05
SMARCE1-214ENST00000578112 OR11H12B2RN74 326 aa8.46□□□□□ -1.06
SMARCE1-214ENST00000578112 SCGNO76038 276 aa8.46□□□□□ -1.06
SMARCE1-214ENST00000578112 FCER2P06734 321 aa8.46□□□□□ -1.06
SMARCE1-214ENST00000578112 CRYGCP07315 174 aa8.46□□□□□ -1.06
SMARCE1-214ENST00000578112 RPL5P46777 297 aaKnown RBP8.46□□□□□ -1.06
SMARCE1-214ENST00000578112 MLLT11Q13015 90 aaPredicted RBP8.46□□□□□ -1.06
SMARCE1-214ENST00000578112 ZNF645Q8N7E2 425 aa8.46□□□□□ -1.06
SMARCE1-214ENST00000578112 BPIFB6Q8NFQ5 453 aa8.46□□□□□ -1.06
SMARCE1-214ENST00000578112 LINC00476Q8WZB0 136 aa8.46□□□□□ -1.06
SMARCE1-214ENST00000578112 RAB3CQ96E17 227 aa8.46□□□□□ -1.06
SMARCE1-214ENST00000578112 FAM110AQ9BQ89 295 aa8.46□□□□□ -1.06
SMARCE1-214ENST00000578112 PLEKHA3Q9HB20 300 aa8.46□□□□□ -1.06
SMARCE1-214ENST00000578112 GSN-AS1Q9NRJ2 163 aa8.46□□□□□ -1.06
SMARCE1-214ENST00000578112 RNF24Q9Y225 148 aa8.46□□□□□ -1.06
SMARCE1-214ENST00000578112 V9GY05 133 aa8.46□□□□□ -1.06
SMARCE1-214ENST00000578112 IZUMO1RA6ND01 250 aa8.46□□□□□ -1.06
SMARCE1-214ENST00000578112 MFNGO00587 321 aa8.46□□□□□ -1.06
SMARCE1-214ENST00000578112 TRBV12-3P01733 135 aa8.46□□□□□ -1.06
SMARCE1-214ENST00000578112 CD36P16671 472 aa8.46□□□□□ -1.06
SMARCE1-214ENST00000578112 S100PP25815 95 aa8.46□□□□□ -1.06
SMARCE1-214ENST00000578112 ZNF45Q02386 682 aa8.46□□□□□ -1.06
SMARCE1-214ENST00000578112 PJVKQ0ZLH3 352 aa8.46□□□□□ -1.06
SMARCE1-214ENST00000578112 FAM106AQ4KMX7 169 aa8.46□□□□□ -1.06
SMARCE1-214ENST00000578112 PLAC9Q5JTB6 97 aa8.46□□□□□ -1.06
SMARCE1-214ENST00000578112 OGFRL1Q5TC84 451 aaPredicted RBP8.46□□□□□ -1.06
SMARCE1-214ENST00000578112 TMEM217Q8N7C4 229 aa8.46□□□□□ -1.06
SMARCE1-214ENST00000578112 OR5H6Q8NGV6 325 aa8.46□□□□□ -1.06
SMARCE1-214ENST00000578112 OR10R2Q8NGX6 335 aa8.46□□□□□ -1.06
SMARCE1-214ENST00000578112 GINS4Q9BRT9 223 aa8.46□□□□□ -1.06
SMARCE1-214ENST00000578112 TPRKBQ9Y3C4 175 aa8.46□□□□□ -1.06
SMARCE1-214ENST00000578112 LYSTQ99698 3801 aa8.45□□□□□ -1.06
SMARCE1-214ENST00000578112 LOC102724200A0A096LPH7 203 aaPredicted RBP8.45□□□□□ -1.06
SMARCE1-214ENST00000578112 TRAV1-2A0A0B4J238 106 aa8.45□□□□□ -1.06
SMARCE1-214ENST00000578112 MARCH11A6NNE9 402 aa8.45□□□□□ -1.06
SMARCE1-214ENST00000578112 SRRM4A7MD48 611 aaKnown RBP8.45□□□□□ -1.06
SMARCE1-214ENST00000578112 ZNF735P0CB33 412 aa8.45□□□□□ -1.06
SMARCE1-214ENST00000578112 C8orf88P0DMB2 117 aa8.45□□□□□ -1.06
SMARCE1-214ENST00000578112 FOLR2P14207 255 aa8.45□□□□□ -1.06
SMARCE1-214ENST00000578112 CAMLGP49069 296 aa8.45□□□□□ -1.06
SMARCE1-214ENST00000578112 CD300CQ08708 224 aa8.45□□□□□ -1.06
SMARCE1-214ENST00000578112 ZNF57Q68EA5 555 aaPredicted RBP8.45□□□□□ -1.06
SMARCE1-214ENST00000578112 TMEM167AQ8TBQ9 72 aa8.45□□□□□ -1.06
SMARCE1-214ENST00000578112 EEF1AKMT3Q96AZ1 226 aa8.45□□□□□ -1.06
SMARCE1-214ENST00000578112 FYTTD1Q96QD9 318 aaKnown RBP8.45□□□□□ -1.06
SMARCE1-214ENST00000578112 GFI1Q99684 422 aa8.45□□□□□ -1.06
SMARCE1-214ENST00000578112 RBM38Q9H0Z9 239 aaKnown RBP8.45□□□□□ -1.06
SMARCE1-214ENST00000578112 OR51E2Q9H255 320 aa8.45□□□□□ -1.06
SMARCE1-214ENST00000578112 TRBV7-1A0A0A6YYK4 115 aa8.44□□□□□ -1.06
SMARCE1-214ENST00000578112 METTL21EPA6NDL7 271 aa8.44□□□□□ -1.06
SMARCE1-214ENST00000578112 C5orf51A6NDU8 294 aa8.44□□□□□ -1.06
SMARCE1-214ENST00000578112 FAM25AB3EWG3 89 aa8.44□□□□□ -1.06
SMARCE1-214ENST00000578112 FAM25CB3EWG5 89 aa8.44□□□□□ -1.06
SMARCE1-214ENST00000578112 FAM25GB3EWG6 89 aa8.44□□□□□ -1.06
SMARCE1-214ENST00000578112 HIST1H1DP16402 221 aaKnown RBP8.44□□□□□ -1.06
SMARCE1-214ENST00000578112 APOC4P55056 127 aa8.44□□□□□ -1.06
SMARCE1-214ENST00000578112 TNFRSF9Q07011 255 aa8.44□□□□□ -1.06
SMARCE1-214ENST00000578112 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.44□□□□□ -1.06
SMARCE1-214ENST00000578112 OR4S2Q8NH73 311 aa8.44□□□□□ -1.06
SMARCE1-214ENST00000578112 CYYR1Q96J86 154 aa8.44□□□□□ -1.06
SMARCE1-214ENST00000578112 CXorf58Q96LI9 332 aa8.44□□□□□ -1.06
SMARCE1-214ENST00000578112 HSD17B10Q99714 261 aaKnown RBP8.44□□□□□ -1.06
SMARCE1-214ENST00000578112 DCSTAMPQ9H295 470 aa8.44□□□□□ -1.06
SMARCE1-214ENST00000578112 ZNF430Q9H8G1 570 aaPredicted RBP8.44□□□□□ -1.06
SMARCE1-214ENST00000578112 RBM7Q9Y580 266 aaKnown RBP8.44□□□□□ -1.06
SMARCE1-214ENST00000578112 KIR2DL5BA0A0G2JN68 375 aa8.44□□□□□ -1.06
SMARCE1-214ENST00000578112 KIR2DL5BA0A0G2JPC4 375 aa8.44□□□□□ -1.06
SMARCE1-214ENST00000578112 TMEM272A0A1B0GTI8 110 aa8.44□□□□□ -1.06
SMARCE1-214ENST00000578112 MFSD2BA6NFX1 497 aa8.44□□□□□ -1.06
SMARCE1-214ENST00000578112 TSPAN4O14817 238 aa8.44□□□□□ -1.06
SMARCE1-214ENST00000578112 CYB5BO43169 146 aa8.44□□□□□ -1.06
SMARCE1-214ENST00000578112 ZNF66Q6ZN08 573 aa8.44□□□□□ -1.06
SMARCE1-214ENST00000578112 TMEM91Q6ZNR0 172 aa8.44□□□□□ -1.06
SMARCE1-214ENST00000578112 Q6ZWC4 215 aa8.44□□□□□ -1.06
SMARCE1-214ENST00000578112 PUSL1Q8N0Z8 303 aaKnown RBP8.44□□□□□ -1.06
SMARCE1-214ENST00000578112 KIR2DL5AQ8N109 375 aa8.44□□□□□ -1.06
SMARCE1-214ENST00000578112 KIR2DL5BQ8NHK3 375 aa8.44□□□□□ -1.06
SMARCE1-214ENST00000578112 ACOT12Q8WYK0 555 aa8.44□□□□□ -1.06
SMARCE1-214ENST00000578112 C5orf30Q96GV9 206 aa8.44□□□□□ -1.06
SMARCE1-214ENST00000578112 KCNK15Q9H427 330 aa8.44□□□□□ -1.06
SMARCE1-214ENST00000578112 SLC2A9Q9NRM0 540 aa8.44□□□□□ -1.06
SMARCE1-214ENST00000578112 KLK5Q9Y337 293 aaPredicted RBP8.44□□□□□ -1.06
SMARCE1-214ENST00000578112 HLA-DQB1P01920 261 aa8.43□□□□□ -1.06
SMARCE1-214ENST00000578112 SAA1P0DJI8 122 aaPredicted RBP8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms