RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 LRP11Q86VZ4 500 aa4.44□□□□□ -1.7
VAPA-203ENST00000577539 C11orf53Q8IXP5 236 aa4.44□□□□□ -1.7
VAPA-203ENST00000577539 FRZBQ92765 325 aa4.44□□□□□ -1.7
VAPA-203ENST00000577539 HIST1H2BHQ93079 126 aa4.44□□□□□ -1.7
VAPA-203ENST00000577539 TMEM186Q96B77 213 aa4.44□□□□□ -1.7
VAPA-203ENST00000577539 MALSU1Q96EH3 234 aa4.44□□□□□ -1.7
VAPA-203ENST00000577539 C5orf30Q96GV9 206 aa4.44□□□□□ -1.7
VAPA-203ENST00000577539 PFDN5Q99471 154 aa4.44□□□□□ -1.7
VAPA-203ENST00000577539 HIST1H2BNQ99877 126 aa4.44□□□□□ -1.7
VAPA-203ENST00000577539 HIST1H2BMQ99879 126 aa4.44□□□□□ -1.7
VAPA-203ENST00000577539 QTRT1Q9BXR0 403 aaKnown RBP4.44□□□□□ -1.7
VAPA-203ENST00000577539 SDF2L1Q9HCN8 221 aa4.44□□□□□ -1.7
VAPA-203ENST00000577539 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.44□□□□□ -1.7
VAPA-203ENST00000577539 TRAV38-1A0A0B4J264 116 aa4.43□□□□□ -1.7
VAPA-203ENST00000577539 IGHV2OR16-5A0A0B4J2B6 119 aa4.43□□□□□ -1.7
VAPA-203ENST00000577539 B4DEV8 164 aa4.43□□□□□ -1.7
VAPA-203ENST00000577539 C17orf112F2Z3M2 114 aa4.43□□□□□ -1.7
VAPA-203ENST00000577539 TRGC1P0CF51 173 aa4.43□□□□□ -1.7
VAPA-203ENST00000577539 HOXA5P20719 270 aa4.43□□□□□ -1.7
VAPA-203ENST00000577539 CHRNA7P36544 502 aa4.43□□□□□ -1.7
VAPA-203ENST00000577539 B2MP61769 119 aa4.43□□□□□ -1.7
VAPA-203ENST00000577539 ADORA2A-AS1P86434 159 aa4.43□□□□□ -1.7
VAPA-203ENST00000577539 GAMTQ14353 236 aa4.43□□□□□ -1.7
VAPA-203ENST00000577539 ATP6V1FQ16864 119 aa4.43□□□□□ -1.7
VAPA-203ENST00000577539 RPL39P5Q59GN2 51 aa4.43□□□□□ -1.7
VAPA-203ENST00000577539 GCSAMLQ5JQS6 135 aa4.43□□□□□ -1.7
VAPA-203ENST00000577539 BHLHA15Q7RTS1 189 aaPredicted RBP4.43□□□□□ -1.7
VAPA-203ENST00000577539 C16orf82Q7Z2V1 217 aa4.43□□□□□ -1.7
VAPA-203ENST00000577539 OR13D1Q8NGV5 346 aa4.43□□□□□ -1.7
VAPA-203ENST00000577539 GGACTQ9BVM4 153 aa4.43□□□□□ -1.7
VAPA-203ENST00000577539 NAT8Q9UHE5 227 aa4.43□□□□□ -1.7
VAPA-203ENST00000577539 IGHV1-18A0A0C4DH31 117 aa4.43□□□□□ -1.7
VAPA-203ENST00000577539 RAB29O14966 203 aa4.43□□□□□ -1.7
VAPA-203ENST00000577539 MBP02144 154 aa4.43□□□□□ -1.7
VAPA-203ENST00000577539 HNF1AP20823 631 aa4.43□□□□□ -1.7
VAPA-203ENST00000577539 CDX1P47902 265 aaPredicted RBP4.43□□□□□ -1.7
VAPA-203ENST00000577539 CDC34P49427 236 aaPredicted RBP4.43□□□□□ -1.7
VAPA-203ENST00000577539 RNF151Q2KHN1 245 aa4.43□□□□□ -1.7
VAPA-203ENST00000577539 ACOT6Q3I5F7 207 aaPredicted RBP4.43□□□□□ -1.7
VAPA-203ENST00000577539 GAGE13Q4V321 117 aa4.43□□□□□ -1.7
VAPA-203ENST00000577539 CD177Q8N6Q3 437 aa4.43□□□□□ -1.7
VAPA-203ENST00000577539 OR2V2Q96R30 315 aa4.43□□□□□ -1.7
VAPA-203ENST00000577539 S1PR3Q99500 378 aa4.43□□□□□ -1.7
VAPA-203ENST00000577539 HSD17B10Q99714 261 aaKnown RBP4.43□□□□□ -1.7
VAPA-203ENST00000577539 TMEM204Q9BSN7 226 aa4.43□□□□□ -1.7
VAPA-203ENST00000577539 PARLQ9H300 379 aa4.43□□□□□ -1.7
VAPA-203ENST00000577539 CXorf65A6NEN9 183 aa4.43□□□□□ -1.7
VAPA-203ENST00000577539 TEX22C9J3V5 150 aa4.43□□□□□ -1.7
VAPA-203ENST00000577539 IGKV3-15P01624 115 aa4.43□□□□□ -1.7
VAPA-203ENST00000577539 OR9G9P0C7N8 305 aa4.43□□□□□ -1.7
VAPA-203ENST00000577539 GALR1P47211 349 aa4.43□□□□□ -1.7
VAPA-203ENST00000577539 CD81P60033 236 aa4.43□□□□□ -1.7
VAPA-203ENST00000577539 ACSF3Q4G176 576 aaPredicted RBP4.43□□□□□ -1.7
VAPA-203ENST00000577539 ABHD12Q8N2K0 398 aa4.43□□□□□ -1.7
VAPA-203ENST00000577539 SSMEM1Q8WWF3 244 aa4.43□□□□□ -1.7
VAPA-203ENST00000577539 TMEM37Q8WXS4 190 aa4.43□□□□□ -1.7
VAPA-203ENST00000577539 NPCDR1Q9BY65 106 aa4.43□□□□□ -1.7
VAPA-203ENST00000577539 HIPK2Q9H2X6 1198 aa4.43□□□□□ -1.7
VAPA-203ENST00000577539 TMEM140Q9NV12 185 aa4.43□□□□□ -1.7
VAPA-203ENST00000577539 ABCA1O95477 2261 aa4.43□□□□□ -1.7
VAPA-203ENST00000577539 SEC14L6B5MCN3 397 aa4.42□□□□□ -1.7
VAPA-203ENST00000577539 C11orf94C9JXX5 98 aa4.42□□□□□ -1.7
VAPA-203ENST00000577539 PPP5D1E7EU14 171 aa4.42□□□□□ -1.7
VAPA-203ENST00000577539 F8WDY8 70 aa4.42□□□□□ -1.7
VAPA-203ENST00000577539 GZMHP20718 246 aa4.42□□□□□ -1.7
VAPA-203ENST00000577539 GNG10P50151 68 aa4.42□□□□□ -1.7
VAPA-203ENST00000577539 MZT1Q08AG7 82 aa4.42□□□□□ -1.7
VAPA-203ENST00000577539 ZNF66Q6ZN08 573 aa4.42□□□□□ -1.7
VAPA-203ENST00000577539 C1QL4Q86Z23 238 aa4.42□□□□□ -1.7
VAPA-203ENST00000577539 ZADH2Q8N4Q0 377 aa4.42□□□□□ -1.7
VAPA-203ENST00000577539 ITLN1Q8WWA0 313 aa4.42□□□□□ -1.7
VAPA-203ENST00000577539 P2RX4Q99571 388 aa4.42□□□□□ -1.7
VAPA-203ENST00000577539 OR51M1Q9H341 326 aa4.42□□□□□ -1.7
VAPA-203ENST00000577539 ENY2Q9NPA8 101 aa4.42□□□□□ -1.7
VAPA-203ENST00000577539 PPIHO43447 177 aaKnown RBP4.42□□□□□ -1.7
VAPA-203ENST00000577539 KBTBD11O94819 623 aa4.42□□□□□ -1.7
VAPA-203ENST00000577539 APC2O95996 2303 aa4.42□□□□□ -1.7
VAPA-203ENST00000577539 IGHG3P01860 377 aa4.42□□□□□ -1.7
VAPA-203ENST00000577539 LIPFP07098 398 aa4.42□□□□□ -1.7
VAPA-203ENST00000577539 ADH4P08319 380 aa4.42□□□□□ -1.7
VAPA-203ENST00000577539 CD1BP29016 333 aa4.42□□□□□ -1.7
VAPA-203ENST00000577539 BRWD1-AS2P59051 145 aa4.42□□□□□ -1.7
VAPA-203ENST00000577539 SELENOVP59797 346 aa4.42□□□□□ -1.7
VAPA-203ENST00000577539 LYG1Q8N1E2 194 aa4.42□□□□□ -1.7
VAPA-203ENST00000577539 ZNF383Q8NA42 475 aa4.42□□□□□ -1.7
VAPA-203ENST00000577539 OR10A7Q8NGE5 316 aa4.42□□□□□ -1.7
VAPA-203ENST00000577539 OR51G1Q8NGK1 321 aa4.42□□□□□ -1.7
VAPA-203ENST00000577539 LURAP1Q96LR2 239 aa4.42□□□□□ -1.7
VAPA-203ENST00000577539 ELOVL1Q9BW60 279 aa4.42□□□□□ -1.7
VAPA-203ENST00000577539 SEBOXQ9HB31 216 aaPredicted RBP4.42□□□□□ -1.7
VAPA-203ENST00000577539 HES4Q9HCC6 221 aa4.42□□□□□ -1.7
VAPA-203ENST00000577539 TNCP24821 2201 aa4.42□□□□□ -1.7
VAPA-203ENST00000577539 TRAV3A0A0B4J244 114 aa4.42□□□□□ -1.7
VAPA-203ENST00000577539 MGST3O14880 152 aa4.42□□□□□ -1.7
VAPA-203ENST00000577539 GYPAP02724 150 aa4.42□□□□□ -1.7
VAPA-203ENST00000577539 SOD3P08294 240 aa4.42□□□□□ -1.7
VAPA-203ENST00000577539 KLF3P57682 345 aaPredicted RBP4.42□□□□□ -1.7
VAPA-203ENST00000577539 RPL23P62829 140 aaKnown RBP4.42□□□□□ -1.7
VAPA-203ENST00000577539 PYY3Q5JQD4 70 aa4.42□□□□□ -1.7
VAPA-203ENST00000577539 MIC13Q5XKP0 118 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms