RNA–Protein interactions for RNA: ENST00000575711.1

RPAIN-217, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-217ENST00000575711 EGR2P11161 476 aaPredicted RBP10.99□□□□□ -0.65
RPAIN-217ENST00000575711 RPL27AP46776 148 aaKnown RBP10.99□□□□□ -0.65
RPAIN-217ENST00000575711 C4orf46Q504U0 113 aa10.99□□□□□ -0.65
RPAIN-217ENST00000575711 C10orf55Q5SWW7 151 aa10.99□□□□□ -0.65
RPAIN-217ENST00000575711 UNQ5815/PRO19632Q6UWF5 114 aa10.99□□□□□ -0.65
RPAIN-217ENST00000575711 LFNGQ8NES3 379 aa10.99□□□□□ -0.65
RPAIN-217ENST00000575711 OR4A16Q8NH70 328 aa10.99□□□□□ -0.65
RPAIN-217ENST00000575711 WIPF2Q8TF74 440 aaPredicted RBP10.99□□□□□ -0.65
RPAIN-217ENST00000575711 CASTOR1Q8WTX7 329 aa10.99□□□□□ -0.65
RPAIN-217ENST00000575711 TMEM68Q96MH6 324 aa10.99□□□□□ -0.65
RPAIN-217ENST00000575711 SPIN2AQ99865 258 aa10.99□□□□□ -0.65
RPAIN-217ENST00000575711 SPIN2BQ9BPZ2 258 aa10.99□□□□□ -0.65
RPAIN-217ENST00000575711 COMMD5Q9GZQ3 224 aa10.99□□□□□ -0.65
RPAIN-217ENST00000575711 PALMDQ9NP74 551 aa10.99□□□□□ -0.65
RPAIN-217ENST00000575711 FKBP11Q9NYL4 201 aa10.99□□□□□ -0.65
RPAIN-217ENST00000575711 PRR13Q9NZ81 148 aa10.99□□□□□ -0.65
RPAIN-217ENST00000575711 PRNDQ9UKY0 176 aa10.99□□□□□ -0.65
RPAIN-217ENST00000575711 NSG2Q9Y328 171 aa10.99□□□□□ -0.65
RPAIN-217ENST00000575711 A0A1W2PN81 502 aa10.98□□□□□ -0.65
RPAIN-217ENST00000575711 C9orf170A2RU37 121 aa10.98□□□□□ -0.65
RPAIN-217ENST00000575711 MSGN1A6NI15 193 aa10.98□□□□□ -0.65
RPAIN-217ENST00000575711 RBMXL2O75526 392 aaKnown RBP10.98□□□□□ -0.65
RPAIN-217ENST00000575711 OPN1MWP04001 364 aa10.98□□□□□ -0.65
RPAIN-217ENST00000575711 OPN1MW2P0DN77 364 aa10.98□□□□□ -0.65
RPAIN-217ENST00000575711 OPN1MW3P0DN78 364 aa10.98□□□□□ -0.65
RPAIN-217ENST00000575711 CHRNA7P36544 502 aa10.98□□□□□ -0.65
RPAIN-217ENST00000575711 RAB25P57735 213 aa10.98□□□□□ -0.65
RPAIN-217ENST00000575711 OR2B8PP59922 312 aa10.98□□□□□ -0.65
RPAIN-217ENST00000575711 KRTAP10-3P60369 221 aa10.98□□□□□ -0.65
RPAIN-217ENST00000575711 CFHR3Q02985 330 aa10.98□□□□□ -0.65
RPAIN-217ENST00000575711 AKIRIN2Q53H80 203 aa10.98□□□□□ -0.65
RPAIN-217ENST00000575711 TEX38Q6PEX7 206 aa10.98□□□□□ -0.65
RPAIN-217ENST00000575711 SHISA2Q6UWI4 295 aa10.98□□□□□ -0.65
RPAIN-217ENST00000575711 NRARPQ7Z6K4 114 aa10.98□□□□□ -0.65
RPAIN-217ENST00000575711 LYG2Q86SG7 212 aa10.98□□□□□ -0.65
RPAIN-217ENST00000575711 FAM219AQ8IW50 185 aa10.98□□□□□ -0.65
RPAIN-217ENST00000575711 COMMD1Q8N668 190 aa10.98□□□□□ -0.65
RPAIN-217ENST00000575711 SLC35G3Q8N808 338 aa10.98□□□□□ -0.65
RPAIN-217ENST00000575711 DUSP18Q8NEJ0 188 aa10.98□□□□□ -0.65
RPAIN-217ENST00000575711 SPATA3Q8NHX4 192 aa10.98□□□□□ -0.65
RPAIN-217ENST00000575711 ALX4Q9H161 411 aaPredicted RBP10.98□□□□□ -0.65
RPAIN-217ENST00000575711 FOXA2Q9Y261 457 aaPredicted RBP10.98□□□□□ -0.65
RPAIN-217ENST00000575711 A0A0B4J2A0 478 aa10.97□□□□□ -0.65
RPAIN-217ENST00000575711 C15orf61A6NNL5 157 aa10.97□□□□□ -0.65
RPAIN-217ENST00000575711 CD28P10747 220 aa10.97□□□□□ -0.65
RPAIN-217ENST00000575711 MYOD1P15172 320 aa10.97□□□□□ -0.65
RPAIN-217ENST00000575711 PPIFP30405 207 aaKnown RBP10.97□□□□□ -0.65
RPAIN-217ENST00000575711 SRSF4Q08170 494 aaKnown RBP10.97□□□□□ -0.65
RPAIN-217ENST00000575711 DHRS2Q13268 280 aa10.97□□□□□ -0.65
RPAIN-217ENST00000575711 C19orf54Q5BKX5 351 aa10.97□□□□□ -0.65
RPAIN-217ENST00000575711 PLET1Q6UQ28 207 aa10.97□□□□□ -0.65
RPAIN-217ENST00000575711 C10orf99Q6UWK7 81 aa10.97□□□□□ -0.65
RPAIN-217ENST00000575711 C11orf44Q8N8P7 122 aa10.97□□□□□ -0.65
RPAIN-217ENST00000575711 MINDY2Q8NBR6 621 aa10.97□□□□□ -0.65
RPAIN-217ENST00000575711 OR1L8Q8NGR8 309 aa10.97□□□□□ -0.65
RPAIN-217ENST00000575711 COQ8AQ8NI60 647 aa10.97□□□□□ -0.65
RPAIN-217ENST00000575711 LSM10Q969L4 123 aaKnown RBP10.97□□□□□ -0.65
RPAIN-217ENST00000575711 FYTTD1Q96QD9 318 aaKnown RBP10.97□□□□□ -0.65
RPAIN-217ENST00000575711 CITED1Q99966 193 aa10.97□□□□□ -0.65
RPAIN-217ENST00000575711 SHPKQ9UHJ6 478 aa10.97□□□□□ -0.65
RPAIN-217ENST00000575711 OR51B2Q9Y5P1 312 aa10.97□□□□□ -0.65
RPAIN-217ENST00000575711 A0A0G2JRQ6 117 aa10.96□□□□□ -0.65
RPAIN-217ENST00000575711 DUXBA0A1W2PPF3 345 aa10.96□□□□□ -0.65
RPAIN-217ENST00000575711 IGHG4P01861 327 aa10.96□□□□□ -0.65
RPAIN-217ENST00000575711 ELANEP08246 267 aa10.96□□□□□ -0.65
RPAIN-217ENST00000575711 P0C879 139 aa10.96□□□□□ -0.65
RPAIN-217ENST00000575711 APELAP0DMC3 54 aa10.96□□□□□ -0.65
RPAIN-217ENST00000575711 MECP2P51608 486 aaKnown RBP10.96□□□□□ -0.65
RPAIN-217ENST00000575711 FOXE3Q13461 319 aa10.96□□□□□ -0.65
RPAIN-217ENST00000575711 IZUMO4Q1ZYL8 232 aa10.96□□□□□ -0.65
RPAIN-217ENST00000575711 ANKRD55Q3KP44 614 aa10.96□□□□□ -0.65
RPAIN-217ENST00000575711 CXorf66Q5JRM2 361 aaPredicted RBP10.96□□□□□ -0.65
RPAIN-217ENST00000575711 THOC7Q6I9Y2 204 aaKnown RBP10.96□□□□□ -0.65
RPAIN-217ENST00000575711 LYZL2Q7Z4W2 148 aa10.96□□□□□ -0.65
RPAIN-217ENST00000575711 LRTM2Q8N967 370 aa10.96□□□□□ -0.65
RPAIN-217ENST00000575711 OR5M8Q8NGP6 311 aa10.96□□□□□ -0.65
RPAIN-217ENST00000575711 OR5B3Q8NH48 314 aa10.96□□□□□ -0.65
RPAIN-217ENST00000575711 QTRT1Q9BXR0 403 aaKnown RBP10.96□□□□□ -0.65
RPAIN-217ENST00000575711 TMEM14BQ9NUH8 114 aa10.96□□□□□ -0.65
RPAIN-217ENST00000575711 TEX50A0A1B0GTY4 177 aa10.95□□□□□ -0.66
RPAIN-217ENST00000575711 HMX3A6NHT5 357 aa10.95□□□□□ -0.66
RPAIN-217ENST00000575711 TEX22C9J3V5 150 aa10.95□□□□□ -0.66
RPAIN-217ENST00000575711 E7EUB6 86 aa10.95□□□□□ -0.66
RPAIN-217ENST00000575711 DUS4LO95620 317 aaKnown RBP10.95□□□□□ -0.66
RPAIN-217ENST00000575711 TRAPPC2P0DI81 140 aa10.95□□□□□ -0.66
RPAIN-217ENST00000575711 TRAPPC2BP0DI82 140 aa10.95□□□□□ -0.66
RPAIN-217ENST00000575711 DCTN2Q13561 401 aaKnown RBP10.95□□□□□ -0.66
RPAIN-217ENST00000575711 KHDC1LQ5JSQ8 128 aa10.95□□□□□ -0.66
RPAIN-217ENST00000575711 ASPHD1Q5U4P2 390 aa10.95□□□□□ -0.66
RPAIN-217ENST00000575711 TMEM65Q6PI78 240 aa10.95□□□□□ -0.66
RPAIN-217ENST00000575711 ZNF429Q86V71 674 aa10.95□□□□□ -0.66
RPAIN-217ENST00000575711 GPR146Q96CH1 333 aa10.95□□□□□ -0.66
RPAIN-217ENST00000575711 SRSF8Q9BRL6 282 aaKnown RBP10.95□□□□□ -0.66
RPAIN-217ENST00000575711 PDCD10Q9BUL8 212 aa10.95□□□□□ -0.66
RPAIN-217ENST00000575711 HINT2Q9BX68 163 aa10.95□□□□□ -0.66
RPAIN-217ENST00000575711 ZNF257Q9Y2Q1 563 aa10.95□□□□□ -0.66
RPAIN-217ENST00000575711 A0A0B4J293 547 aa10.94□□□□□ -0.66
RPAIN-217ENST00000575711 A0A1B0GW64 132 aa10.94□□□□□ -0.66
RPAIN-217ENST00000575711 TCRBV4S1A1TA0A5B7 111 aa10.94□□□□□ -0.66
RPAIN-217ENST00000575711 CGB1A6NKQ9 187 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms