RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 C8orf4Q9NR00 106 aa6.62□□□□□ -1.35
SMG6-218ENST00000575454 PSORS1C1Q9UIG5 152 aa6.62□□□□□ -1.35
SMG6-218ENST00000575454 S4R3C0 116 aa6.62□□□□□ -1.35
SMG6-218ENST00000575454 MFSD2BA6NFX1 497 aa6.61□□□□□ -1.35
SMG6-218ENST00000575454 K7EMT4 169 aa6.61□□□□□ -1.35
SMG6-218ENST00000575454 NDUFA4O00483 81 aa6.61□□□□□ -1.35
SMG6-218ENST00000575454 TGOLN2O43493 480 aa6.61□□□□□ -1.35
SMG6-218ENST00000575454 XRCC3O43542 346 aa6.61□□□□□ -1.35
SMG6-218ENST00000575454 MRPS14O60783 128 aaKnown RBP6.61□□□□□ -1.35
SMG6-218ENST00000575454 HLA-DQB1P01920 261 aa6.61□□□□□ -1.35
SMG6-218ENST00000575454 CRHBPP24387 322 aa6.61□□□□□ -1.35
SMG6-218ENST00000575454 TRAM1Q15629 374 aa6.61□□□□□ -1.35
SMG6-218ENST00000575454 C2orf76Q3KRA6 126 aa6.61□□□□□ -1.35
SMG6-218ENST00000575454 AHSA2Q719I0 299 aa6.61□□□□□ -1.35
SMG6-218ENST00000575454 VKORC1L1Q8N0U8 176 aa6.61□□□□□ -1.35
SMG6-218ENST00000575454 PUSL1Q8N0Z8 303 aaKnown RBP6.61□□□□□ -1.35
SMG6-218ENST00000575454 TCTEX1D2Q8WW35 142 aa6.61□□□□□ -1.35
SMG6-218ENST00000575454 S100A14Q9HCY8 104 aa6.61□□□□□ -1.35
SMG6-218ENST00000575454 PLCXD1Q9NUJ7 323 aa6.61□□□□□ -1.35
SMG6-218ENST00000575454 APLNQ9ULZ1 77 aa6.61□□□□□ -1.35
SMG6-218ENST00000575454 KCNK7Q9Y2U2 307 aa6.61□□□□□ -1.35
SMG6-218ENST00000575454 RBMX2Q9Y388 322 aaKnown RBP6.61□□□□□ -1.35
SMG6-218ENST00000575454 OR2W1Q9Y3N9 320 aa6.61□□□□□ -1.35
SMG6-218ENST00000575454 UBR4Q5T4S7 5183 aa6.61□□□□□ -1.35
SMG6-218ENST00000575454 MUC4Q99102 2169 aa6.6□□□□□ -1.35
SMG6-218ENST00000575454 IGHV3-35A0A0C4DH35 117 aa6.6□□□□□ -1.35
SMG6-218ENST00000575454 A0A1B0GVY2 172 aa6.6□□□□□ -1.35
SMG6-218ENST00000575454 METTL21EPA6NDL7 271 aa6.6□□□□□ -1.35
SMG6-218ENST00000575454 C15orf62A8K5M9 175 aa6.6□□□□□ -1.35
SMG6-218ENST00000575454 E7EUB6 86 aa6.6□□□□□ -1.35
SMG6-218ENST00000575454 CD5P06127 495 aa6.6□□□□□ -1.35
SMG6-218ENST00000575454 FGF2P09038 288 aa6.6□□□□□ -1.35
SMG6-218ENST00000575454 GNB3P16520 340 aa6.6□□□□□ -1.35
SMG6-218ENST00000575454 DTYMKP23919 212 aa6.6□□□□□ -1.35
SMG6-218ENST00000575454 PSMA1P25786 263 aaKnown RBP6.6□□□□□ -1.35
SMG6-218ENST00000575454 TMEM187Q14656 261 aa6.6□□□□□ -1.35
SMG6-218ENST00000575454 SPHARQ15513 63 aa6.6□□□□□ -1.35
SMG6-218ENST00000575454 OR2B11Q5JQS5 317 aa6.6□□□□□ -1.35
SMG6-218ENST00000575454 THOC7Q6I9Y2 204 aaKnown RBP6.6□□□□□ -1.35
SMG6-218ENST00000575454 ZNF66Q6ZN08 573 aa6.6□□□□□ -1.35
SMG6-218ENST00000575454 HSD17B13Q7Z5P4 300 aaPredicted RBP6.6□□□□□ -1.35
SMG6-218ENST00000575454 C8orf59Q8N0T1 100 aaPredicted RBP6.6□□□□□ -1.35
SMG6-218ENST00000575454 DHRSXQ8N5I4 330 aa6.6□□□□□ -1.35
SMG6-218ENST00000575454 OR10R2Q8NGX6 335 aa6.6□□□□□ -1.35
SMG6-218ENST00000575454 UFD1Q92890 307 aa6.6□□□□□ -1.35
SMG6-218ENST00000575454 CMTM3Q96MX0 182 aa6.6□□□□□ -1.35
SMG6-218ENST00000575454 AK6Q9Y3D8 172 aaKnown RBP6.6□□□□□ -1.35
SMG6-218ENST00000575454 A0A1B0GW64 132 aa6.59□□□□□ -1.35
SMG6-218ENST00000575454 PRSS29PA6NIE9 313 aa6.59□□□□□ -1.35
SMG6-218ENST00000575454 J3QRK9 145 aa6.59□□□□□ -1.35
SMG6-218ENST00000575454 MFNGO00587 321 aa6.59□□□□□ -1.35
SMG6-218ENST00000575454 REG1AP05451 166 aa6.59□□□□□ -1.35
SMG6-218ENST00000575454 CTSDP07339 412 aaPredicted RBP6.59□□□□□ -1.35
SMG6-218ENST00000575454 RPA2P15927 270 aa6.59□□□□□ -1.35
SMG6-218ENST00000575454 HIST1H1DP16402 221 aaKnown RBP6.59□□□□□ -1.35
SMG6-218ENST00000575454 CLDN12P56749 244 aa6.59□□□□□ -1.35
SMG6-218ENST00000575454 OR2B8PP59922 312 aa6.59□□□□□ -1.35
SMG6-218ENST00000575454 RPL30P62888 115 aaKnown RBP6.59□□□□□ -1.35
SMG6-218ENST00000575454 PAFAH1B2P68402 229 aa6.59□□□□□ -1.35
SMG6-218ENST00000575454 LIPKQ5VXJ0 399 aa6.59□□□□□ -1.35
SMG6-218ENST00000575454 SSX9Q7RTT3 188 aa6.59□□□□□ -1.35
SMG6-218ENST00000575454 APRG1Q8IVJ8 170 aa6.59□□□□□ -1.35
SMG6-218ENST00000575454 MFSD4AQ8N468 514 aa6.59□□□□□ -1.35
SMG6-218ENST00000575454 PACRGLQ8N7B6 248 aa6.59□□□□□ -1.35
SMG6-218ENST00000575454 BPIFB6Q8NFQ5 453 aa6.59□□□□□ -1.35
SMG6-218ENST00000575454 MAFIPQ8WZ33 124 aa6.59□□□□□ -1.35
SMG6-218ENST00000575454 C20orf24Q9BUV8 137 aa6.59□□□□□ -1.35
SMG6-218ENST00000575454 COMMD5Q9GZQ3 224 aa6.59□□□□□ -1.35
SMG6-218ENST00000575454 HRASLSQ9HDD0 168 aa6.59□□□□□ -1.35
SMG6-218ENST00000575454 BET1LQ9NYM9 111 aa6.59□□□□□ -1.35
SMG6-218ENST00000575454 SPATA2Q9UM82 520 aa6.59□□□□□ -1.35
SMG6-218ENST00000575454 V9GY05 133 aa6.59□□□□□ -1.35
SMG6-218ENST00000575454 A0A075B6Q4 140 aa6.58□□□□□ -1.36
SMG6-218ENST00000575454 TRAV10A0A0B4J240 114 aa6.58□□□□□ -1.36
SMG6-218ENST00000575454 TMEM272A0A1B0GTI8 110 aa6.58□□□□□ -1.36
SMG6-218ENST00000575454 IGLC7A0M8Q6 106 aa6.58□□□□□ -1.36
SMG6-218ENST00000575454 OR2T8A6NH00 312 aa6.58□□□□□ -1.36
SMG6-218ENST00000575454 RAB27BO00194 218 aa6.58□□□□□ -1.36
SMG6-218ENST00000575454 S1PR2O95136 353 aa6.58□□□□□ -1.36
SMG6-218ENST00000575454 CA1P00915 261 aaPredicted RBP6.58□□□□□ -1.36
SMG6-218ENST00000575454 IGLV2-14P01704 120 aa6.58□□□□□ -1.36
SMG6-218ENST00000575454 P0DMU3 169 aa6.58□□□□□ -1.36
SMG6-218ENST00000575454 FAM231AP0DMU4 169 aa6.58□□□□□ -1.36
SMG6-218ENST00000575454 FAM231CP0DMU5 169 aa6.58□□□□□ -1.36
SMG6-218ENST00000575454 RAB6AP20340 208 aa6.58□□□□□ -1.36
SMG6-218ENST00000575454 MSMO1Q15800 293 aa6.58□□□□□ -1.36
SMG6-218ENST00000575454 TMEM41BQ5BJD5 291 aa6.58□□□□□ -1.36
SMG6-218ENST00000575454 TMEM203Q969S6 136 aa6.58□□□□□ -1.36
SMG6-218ENST00000575454 GFI1Q99684 422 aa6.58□□□□□ -1.36
SMG6-218ENST00000575454 RNF126Q9BV68 326 aa6.58□□□□□ -1.36
SMG6-218ENST00000575454 QTRT1Q9BXR0 403 aaKnown RBP6.58□□□□□ -1.36
SMG6-218ENST00000575454 DCSTAMPQ9H295 470 aa6.58□□□□□ -1.36
SMG6-218ENST00000575454 FKBP14Q9NWM8 211 aa6.58□□□□□ -1.36
SMG6-218ENST00000575454 SMPXQ9UHP9 88 aa6.58□□□□□ -1.36
SMG6-218ENST00000575454 C15orf61A6NNL5 157 aa6.57□□□□□ -1.36
SMG6-218ENST00000575454 PDCD5O14737 125 aa6.57□□□□□ -1.36
SMG6-218ENST00000575454 DEFB4AO15263 64 aa6.57□□□□□ -1.36
SMG6-218ENST00000575454 RBFOX2O43251 390 aaKnown RBP eCLIP6.57□□□□□ -1.36
SMG6-218ENST00000575454 DFFBO76075 338 aa6.57□□□□□ -1.36
SMG6-218ENST00000575454 NFYAP23511 347 aaPredicted RBP6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms