RNA–Protein interactions for RNA: ENST00000574494.1

TRAP1-210, Transcript of TNF receptor associated protein 1, humanhuman

TSL 2

Gene TRAP1, Length 547 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAP1-210ENST00000574494 OR10P1Q8NGE3 313 aa11.32□□□□□ -0.6
TRAP1-210ENST00000574494 OR2T10Q8NGZ9 312 aa11.32□□□□□ -0.6
TRAP1-210ENST00000574494 GNPNAT1Q96EK6 184 aaPredicted RBP11.32□□□□□ -0.6
TRAP1-210ENST00000574494 C1orf159Q96HA4 380 aa11.32□□□□□ -0.6
TRAP1-210ENST00000574494 HILPDAQ9Y5L2 63 aa11.32□□□□□ -0.6
TRAP1-210ENST00000574494 AUP1Q9Y679 476 aa11.32□□□□□ -0.6
TRAP1-210ENST00000574494 IGHV3-72A0A0B4J1Y9 119 aa11.31□□□□□ -0.6
TRAP1-210ENST00000574494 J3QLI3 93 aa11.31□□□□□ -0.6
TRAP1-210ENST00000574494 NPFFO15130 113 aa11.31□□□□□ -0.6
TRAP1-210ENST00000574494 SLC25A17O43808 307 aa11.31□□□□□ -0.6
TRAP1-210ENST00000574494 VENTXO95231 258 aa11.31□□□□□ -0.6
TRAP1-210ENST00000574494 MOSP00540 346 aa11.31□□□□□ -0.6
TRAP1-210ENST00000574494 PRB3Q04118 309 aaPredicted RBP11.31□□□□□ -0.6
TRAP1-210ENST00000574494 SLC38A11Q08AI6 406 aa11.31□□□□□ -0.6
TRAP1-210ENST00000574494 PLGLAQ15195 96 aa11.31□□□□□ -0.6
TRAP1-210ENST00000574494 TMEM217Q8N7C4 229 aa11.31□□□□□ -0.6
TRAP1-210ENST00000574494 ZDHHC16Q969W1 377 aa11.31□□□□□ -0.6
TRAP1-210ENST00000574494 HINT2Q9BX68 163 aa11.31□□□□□ -0.6
TRAP1-210ENST00000574494 ABCA2Q9BZC7 2435 aa11.31□□□□□ -0.6
TRAP1-210ENST00000574494 SPG11Q96JI7 2443 aa11.3□□□□□ -0.6
TRAP1-210ENST00000574494 TRAV3A0A0B4J244 114 aa11.3□□□□□ -0.6
TRAP1-210ENST00000574494 SRRM4A7MD48 611 aaKnown RBP11.3□□□□□ -0.6
TRAP1-210ENST00000574494 TSPAN9O75954 239 aa11.3□□□□□ -0.6
TRAP1-210ENST00000574494 IGLV2-23P01705 113 aa11.3□□□□□ -0.6
TRAP1-210ENST00000574494 SEC11BP0C7V7 166 aa11.3□□□□□ -0.6
TRAP1-210ENST00000574494 NPY1RP25929 384 aa11.3□□□□□ -0.6
TRAP1-210ENST00000574494 VDAC2P45880 294 aaPredicted RBP11.3□□□□□ -0.6
TRAP1-210ENST00000574494 SSX2Q16385 188 aa11.3□□□□□ -0.6
TRAP1-210ENST00000574494 HSD17B13Q7Z5P4 300 aaPredicted RBP11.3□□□□□ -0.6
TRAP1-210ENST00000574494 PDZD9Q8IXQ8 264 aa11.3□□□□□ -0.6
TRAP1-210ENST00000574494 SLC24A4Q8NFF2 622 aa11.3□□□□□ -0.6
TRAP1-210ENST00000574494 SCGB1C1Q8TD33 95 aa11.3□□□□□ -0.6
TRAP1-210ENST00000574494 RNF141Q8WVD5 230 aa11.3□□□□□ -0.6
TRAP1-210ENST00000574494 CFHR4Q92496 578 aa11.3□□□□□ -0.6
TRAP1-210ENST00000574494 GINS3Q9BRX5 216 aa11.3□□□□□ -0.6
TRAP1-210ENST00000574494 TMEM147Q9BVK8 224 aa11.3□□□□□ -0.6
TRAP1-210ENST00000574494 PARD6GQ9BYG4 376 aaPredicted RBP11.3□□□□□ -0.6
TRAP1-210ENST00000574494 ARV1Q9H2C2 271 aa11.3□□□□□ -0.6
TRAP1-210ENST00000574494 METTL1Q9UBP6 276 aaKnown RBP11.3□□□□□ -0.6
TRAP1-210ENST00000574494 IGHV1-69DA0A0B4J2H0 117 aa11.29□□□□□ -0.6
TRAP1-210ENST00000574494 A0A1W2PRD5 423 aa11.29□□□□□ -0.6
TRAP1-210ENST00000574494 A0A1W2PRF3 423 aa11.29□□□□□ -0.6
TRAP1-210ENST00000574494 A0A1W2PRM7 423 aa11.29□□□□□ -0.6
TRAP1-210ENST00000574494 INS-IGF2F8WCM5 200 aa11.29□□□□□ -0.6
TRAP1-210ENST00000574494 NBR2O15453 112 aa11.29□□□□□ -0.6
TRAP1-210ENST00000574494 IGHV1-69P01742 117 aa11.29□□□□□ -0.6
TRAP1-210ENST00000574494 FAM106CPP0CH98 169 aa11.29□□□□□ -0.6
TRAP1-210ENST00000574494 SAA4P35542 130 aa11.29□□□□□ -0.6
TRAP1-210ENST00000574494 RAB5CP51148 216 aa11.29□□□□□ -0.6
TRAP1-210ENST00000574494 SUB1P53999 127 aaKnown RBP eCLIP11.29□□□□□ -0.6
TRAP1-210ENST00000574494 KRTAP10-9P60411 292 aa11.29□□□□□ -0.6
TRAP1-210ENST00000574494 ERHP84090 104 aaKnown RBP11.29□□□□□ -0.6
TRAP1-210ENST00000574494 HES1Q14469 280 aa11.29□□□□□ -0.6
TRAP1-210ENST00000574494 PSG5Q15238 335 aa11.29□□□□□ -0.6
TRAP1-210ENST00000574494 MMDQ15546 238 aa11.29□□□□□ -0.6
TRAP1-210ENST00000574494 SPINK9Q5DT21 86 aa11.29□□□□□ -0.6
TRAP1-210ENST00000574494 OR8G2PQ6IF36 304 aa11.29□□□□□ -0.6
TRAP1-210ENST00000574494 LHFPL4Q7Z7J7 247 aa11.29□□□□□ -0.6
TRAP1-210ENST00000574494 TMED6Q8WW62 240 aa11.29□□□□□ -0.6
TRAP1-210ENST00000574494 OR4C12Q96R67 309 aa11.29□□□□□ -0.6
TRAP1-210ENST00000574494 GGACTQ9BVM4 153 aa11.29□□□□□ -0.6
TRAP1-210ENST00000574494 ZNF430Q9H8G1 570 aaPredicted RBP11.29□□□□□ -0.6
TRAP1-210ENST00000574494 C1RLQ9NZP8 487 aa11.29□□□□□ -0.6
TRAP1-210ENST00000574494 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.28□□□□□ -0.6
TRAP1-210ENST00000574494 TRAV40A0A0B4J280 105 aa11.28□□□□□ -0.6
TRAP1-210ENST00000574494 RRHO14718 337 aa11.28□□□□□ -0.6
TRAP1-210ENST00000574494 IGKV1D-33P01593 117 aa11.28□□□□□ -0.6
TRAP1-210ENST00000574494 IGKV1-33P01594 117 aa11.28□□□□□ -0.6
TRAP1-210ENST00000574494 SNCAP37840 140 aa11.28□□□□□ -0.6
TRAP1-210ENST00000574494 RPL27AP46776 148 aaKnown RBP11.28□□□□□ -0.6
TRAP1-210ENST00000574494 PRSS8Q16651 343 aa11.28□□□□□ -0.6
TRAP1-210ENST00000574494 CLEC9AQ6UXN8 241 aa11.28□□□□□ -0.6
TRAP1-210ENST00000574494 PPP1R27Q86WC6 154 aa11.28□□□□□ -0.6
TRAP1-210ENST00000574494 SRSF8Q9BRL6 282 aaKnown RBP11.28□□□□□ -0.6
TRAP1-210ENST00000574494 C7orf69Q9H7B7 122 aa11.28□□□□□ -0.6
TRAP1-210ENST00000574494 UQCC1Q9NVA1 299 aa11.28□□□□□ -0.6
TRAP1-210ENST00000574494 HIF1ANQ9NWT6 349 aa11.28□□□□□ -0.6
TRAP1-210ENST00000574494 PFDN2Q9UHV9 154 aa11.28□□□□□ -0.6
TRAP1-210ENST00000574494 SIGLEC9Q9Y336 463 aa11.28□□□□□ -0.6
TRAP1-210ENST00000574494 TEX50A0A1B0GTY4 177 aa11.27□□□□□ -0.61
TRAP1-210ENST00000574494 RPS10-NUDT3A0A1W2PQS6 291 aa11.27□□□□□ -0.61
TRAP1-210ENST00000574494 C15orf62A8K5M9 175 aa11.27□□□□□ -0.61
TRAP1-210ENST00000574494 UMAD1C9J7I0 102 aa11.27□□□□□ -0.61
TRAP1-210ENST00000574494 NDUFA3O95167 84 aa11.27□□□□□ -0.61
TRAP1-210ENST00000574494 IFNA4P05014 189 aa11.27□□□□□ -0.61
TRAP1-210ENST00000574494 SNRNP70P08621 437 aaKnown RBP11.27□□□□□ -0.61
TRAP1-210ENST00000574494 TMEM11P17152 192 aa11.27□□□□□ -0.61
TRAP1-210ENST00000574494 BPIFB3P59826 476 aa11.27□□□□□ -0.61
TRAP1-210ENST00000574494 ETV3LQ6ZN32 361 aa11.27□□□□□ -0.61
TRAP1-210ENST00000574494 THNSL2Q86YJ6 484 aa11.27□□□□□ -0.61
TRAP1-210ENST00000574494 HSD17B11Q8NBQ5 300 aa11.27□□□□□ -0.61
TRAP1-210ENST00000574494 SAT2Q96F10 170 aaPredicted RBP11.27□□□□□ -0.61
TRAP1-210ENST00000574494 BSCL2Q96G97 398 aaPredicted RBP11.27□□□□□ -0.61
TRAP1-210ENST00000574494 REG4Q9BYZ8 158 aa11.27□□□□□ -0.61
TRAP1-210ENST00000574494 WFDC1Q9HC57 220 aa11.27□□□□□ -0.61
TRAP1-210ENST00000574494 NDUFA4L2Q9NRX3 87 aa11.27□□□□□ -0.61
TRAP1-210ENST00000574494 KCNIP2Q9NS61 270 aa11.27□□□□□ -0.61
TRAP1-210ENST00000574494 A0A096LNT2 108 aa11.26□□□□□ -0.61
TRAP1-210ENST00000574494 CENPVL3A0A0U1RRI6 287 aa11.26□□□□□ -0.61
TRAP1-210ENST00000574494 UBE2L5PA0A1B0GUS4 154 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms