RNA–Protein interactions for RNA: ENST00000574294.5

TVP23B-207, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 5

Gene TVP23B, Length 1,049 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-207ENST00000574294 LCN12Q6JVE5 192 aa12.6□□□□□ -0.39
TVP23B-207ENST00000574294 DMBX1Q8NFW5 382 aa12.6□□□□□ -0.39
TVP23B-207ENST00000574294 C15orf40Q8WUR7 153 aa12.6□□□□□ -0.39
TVP23B-207ENST00000574294 FBXL7Q9UJT9 491 aa12.6□□□□□ -0.39
TVP23B-207ENST00000574294 BMPR1BO00238 502 aa12.59□□□□□ -0.39
TVP23B-207ENST00000574294 RBMXL2O75526 392 aaKnown RBP12.59□□□□□ -0.39
TVP23B-207ENST00000574294 PGLYRP1O75594 196 aaPredicted RBP12.59□□□□□ -0.39
TVP23B-207ENST00000574294 OR2J3O76001 311 aa12.59□□□□□ -0.39
TVP23B-207ENST00000574294 GABARAPO95166 117 aa12.59□□□□□ -0.39
TVP23B-207ENST00000574294 TRBV12-3P01733 135 aa12.59□□□□□ -0.39
TVP23B-207ENST00000574294 PMP2P02689 132 aa12.59□□□□□ -0.39
TVP23B-207ENST00000574294 PRH1P02810 166 aa12.59□□□□□ -0.39
TVP23B-207ENST00000574294 CTRB1P17538 263 aa12.59□□□□□ -0.39
TVP23B-207ENST00000574294 HRH1P35367 487 aa12.59□□□□□ -0.39
TVP23B-207ENST00000574294 TSPAN5P62079 268 aa12.59□□□□□ -0.39
TVP23B-207ENST00000574294 DEFA5Q01523 94 aa12.59□□□□□ -0.39
TVP23B-207ENST00000574294 CTRB2Q6GPI1 263 aa12.59□□□□□ -0.39
TVP23B-207ENST00000574294 SGPP2Q8IWX5 399 aa12.59□□□□□ -0.39
TVP23B-207ENST00000574294 Q8N402 240 aa12.59□□□□□ -0.39
TVP23B-207ENST00000574294 DGCR14Q96DF8 476 aaKnown RBP12.59□□□□□ -0.39
TVP23B-207ENST00000574294 CXorf58Q96LI9 332 aa12.59□□□□□ -0.39
TVP23B-207ENST00000574294 THYN1Q9P016 225 aa12.59□□□□□ -0.39
TVP23B-207ENST00000574294 A8MZ25 164 aa12.58□□□□□ -0.4
TVP23B-207ENST00000574294 GGCTO75223 188 aaKnown RBP12.58□□□□□ -0.4
TVP23B-207ENST00000574294 CSN3P07498 182 aa12.58□□□□□ -0.4
TVP23B-207ENST00000574294 ZNF182P17025 639 aaPredicted RBP12.58□□□□□ -0.4
TVP23B-207ENST00000574294 HLA-DMAP28067 261 aa12.58□□□□□ -0.4
TVP23B-207ENST00000574294 OR2B8PP59922 312 aa12.58□□□□□ -0.4
TVP23B-207ENST00000574294 IL34Q6ZMJ4 242 aa12.58□□□□□ -0.4
TVP23B-207ENST00000574294 LYSMD2Q8IV50 215 aa12.58□□□□□ -0.4
TVP23B-207ENST00000574294 EEF1AKMT3Q96AZ1 226 aa12.58□□□□□ -0.4
TVP23B-207ENST00000574294 QTRT1Q9BXR0 403 aaKnown RBP12.58□□□□□ -0.4
TVP23B-207ENST00000574294 TMEM140Q9NV12 185 aa12.58□□□□□ -0.4
TVP23B-207ENST00000574294 TRBV7-1A0A0A6YYK4 115 aa12.57□□□□□ -0.4
TVP23B-207ENST00000574294 A0A1B0GW64 132 aa12.57□□□□□ -0.4
TVP23B-207ENST00000574294 MARCH11A6NNE9 402 aa12.57□□□□□ -0.4
TVP23B-207ENST00000574294 E7EUB6 86 aa12.57□□□□□ -0.4
TVP23B-207ENST00000574294 LGALS9O00182 355 aa12.57□□□□□ -0.4
TVP23B-207ENST00000574294 HPGDSO60760 199 aa12.57□□□□□ -0.4
TVP23B-207ENST00000574294 S1PR2O95136 353 aa12.57□□□□□ -0.4
TVP23B-207ENST00000574294 RLN1P04808 185 aa12.57□□□□□ -0.4
TVP23B-207ENST00000574294 AREGP15514 252 aa12.57□□□□□ -0.4
TVP23B-207ENST00000574294 ELK1P19419 428 aa12.57□□□□□ -0.4
TVP23B-207ENST00000574294 UCP3P55916 312 aa12.57□□□□□ -0.4
TVP23B-207ENST00000574294 CTF1Q16619 201 aa12.57□□□□□ -0.4
TVP23B-207ENST00000574294 GPHB5Q86YW7 130 aa12.57□□□□□ -0.4
TVP23B-207ENST00000574294 SNX29P2Q8IUI4 249 aa12.57□□□□□ -0.4
TVP23B-207ENST00000574294 LAX1Q8IWV1 398 aa12.57□□□□□ -0.4
TVP23B-207ENST00000574294 FANCD2OSQ96PS1 177 aa12.57□□□□□ -0.4
TVP23B-207ENST00000574294 TSC22D3Q99576 134 aa12.57□□□□□ -0.4
TVP23B-207ENST00000574294 MRPS26Q9BYN8 205 aaKnown RBP12.57□□□□□ -0.4
TVP23B-207ENST00000574294 FKBP11Q9NYL4 201 aa12.57□□□□□ -0.4
TVP23B-207ENST00000574294 IGLV11-55A0A075B6I3 123 aa12.56□□□□□ -0.4
TVP23B-207ENST00000574294 FAM25AB3EWG3 89 aa12.56□□□□□ -0.4
TVP23B-207ENST00000574294 FAM25CB3EWG5 89 aa12.56□□□□□ -0.4
TVP23B-207ENST00000574294 FAM25GB3EWG6 89 aa12.56□□□□□ -0.4
TVP23B-207ENST00000574294 SNAPC5O75971 98 aa12.56□□□□□ -0.4
TVP23B-207ENST00000574294 FRMD6-AS1P0C7T7 363 aa12.56□□□□□ -0.4
TVP23B-207ENST00000574294 TBPP20226 339 aa12.56□□□□□ -0.4
TVP23B-207ENST00000574294 FAM106AQ4KMX7 169 aa12.56□□□□□ -0.4
TVP23B-207ENST00000574294 GTSCR1Q86UQ5 136 aa12.56□□□□□ -0.4
TVP23B-207ENST00000574294 SLC38A6Q8IZM9 456 aa12.56□□□□□ -0.4
TVP23B-207ENST00000574294 OR1L8Q8NGR8 309 aa12.56□□□□□ -0.4
TVP23B-207ENST00000574294 ZMAT4Q9H898 229 aa12.56□□□□□ -0.4
TVP23B-207ENST00000574294 IGLC7A0M8Q6 106 aa12.55□□□□□ -0.4
TVP23B-207ENST00000574294 NDUFB8O95169 186 aa12.55□□□□□ -0.4
TVP23B-207ENST00000574294 TRAPPC2P0DI81 140 aa12.55□□□□□ -0.4
TVP23B-207ENST00000574294 TRAPPC2BP0DI82 140 aa12.55□□□□□ -0.4
TVP23B-207ENST00000574294 SMIM18P0DKX4 95 aa12.55□□□□□ -0.4
TVP23B-207ENST00000574294 ARL3P36405 182 aa12.55□□□□□ -0.4
TVP23B-207ENST00000574294 LPAR6P43657 344 aa12.55□□□□□ -0.4
TVP23B-207ENST00000574294 MECP2P51608 486 aaKnown RBP12.55□□□□□ -0.4
TVP23B-207ENST00000574294 GPR107Q5VW38 600 aa12.55□□□□□ -0.4
TVP23B-207ENST00000574294 GPR141Q7Z602 305 aa12.55□□□□□ -0.4
TVP23B-207ENST00000574294 Q8N1Y9 231 aa12.55□□□□□ -0.4
TVP23B-207ENST00000574294 FCAMRQ8WWV6 532 aa12.55□□□□□ -0.4
TVP23B-207ENST00000574294 ASCL2Q99929 193 aa12.55□□□□□ -0.4
TVP23B-207ENST00000574294 FXYD6Q9H0Q3 95 aa12.55□□□□□ -0.4
TVP23B-207ENST00000574294 TECRQ9NZ01 308 aaKnown RBP12.55□□□□□ -0.4
TVP23B-207ENST00000574294 PRNDQ9UKY0 176 aa12.55□□□□□ -0.4
TVP23B-207ENST00000574294 CGB1A6NKQ9 187 aa12.54□□□□□ -0.4
TVP23B-207ENST00000574294 KRASP01116 189 aa12.54□□□□□ -0.4
TVP23B-207ENST00000574294 IFNA6P05013 189 aa12.54□□□□□ -0.4
TVP23B-207ENST00000574294 HAPLN4Q86UW8 402 aa12.54□□□□□ -0.4
TVP23B-207ENST00000574294 SBSPONQ8IVN8 264 aa12.54□□□□□ -0.4
TVP23B-207ENST00000574294 ARRDC1Q8N5I2 433 aa12.54□□□□□ -0.4
TVP23B-207ENST00000574294 GDPD1Q8N9F7 314 aa12.54□□□□□ -0.4
TVP23B-207ENST00000574294 OR1L6Q8NGR2 347 aa12.54□□□□□ -0.4
TVP23B-207ENST00000574294 OR5B3Q8NH48 314 aa12.54□□□□□ -0.4
TVP23B-207ENST00000574294 ZNF486Q96H40 463 aaPredicted RBP12.54□□□□□ -0.4
TVP23B-207ENST00000574294 TMEM56Q96MV1 263 aa12.54□□□□□ -0.4
TVP23B-207ENST00000574294 ATP6V0BQ99437 205 aa12.54□□□□□ -0.4
TVP23B-207ENST00000574294 DMRT1Q9Y5R6 373 aa12.54□□□□□ -0.4
TVP23B-207ENST00000574294 TRAV3A0A0B4J244 114 aa12.53□□□□□ -0.4
TVP23B-207ENST00000574294 SERPINE2P07093 398 aa12.53□□□□□ -0.4
TVP23B-207ENST00000574294 IGHV4-30-4P0DP06 118 aa12.53□□□□□ -0.4
TVP23B-207ENST00000574294 PTBP1P26599 531 aaKnown RBP eCLIP12.53□□□□□ -0.4
TVP23B-207ENST00000574294 RNASE10Q5GAN6 216 aaKnown RBP12.53□□□□□ -0.4
TVP23B-207ENST00000574294 VN1R17PQ8TDU5 208 aa12.53□□□□□ -0.4
TVP23B-207ENST00000574294 DYNLRB2Q8TF09 96 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms