RNA–Protein interactions for RNA: ENST00000572665.1

CIITA-208, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-208ENST00000572665 V9GY05 133 aa7.07□□□□□ -1.28
CIITA-208ENST00000572665 A0A0A6YYD4 124 aa7.06□□□□□ -1.28
CIITA-208ENST00000572665 TRIM64CA6NLI5 447 aa7.06□□□□□ -1.28
CIITA-208ENST00000572665 FABP7O15540 132 aa7.06□□□□□ -1.28
CIITA-208ENST00000572665 MRPS14O60783 128 aaKnown RBP7.06□□□□□ -1.28
CIITA-208ENST00000572665 IGHV4-30-4P0DP06 118 aa7.06□□□□□ -1.28
CIITA-208ENST00000572665 CALRP27797 417 aaKnown RBP7.06□□□□□ -1.28
CIITA-208ENST00000572665 TALDO1P37837 337 aa7.06□□□□□ -1.28
CIITA-208ENST00000572665 SSX1Q16384 188 aa7.06□□□□□ -1.28
CIITA-208ENST00000572665 RPEL1Q2QD12 228 aa7.06□□□□□ -1.28
CIITA-208ENST00000572665 C2orf76Q3KRA6 126 aa7.06□□□□□ -1.28
CIITA-208ENST00000572665 CFAP161Q6P656 301 aa7.06□□□□□ -1.28
CIITA-208ENST00000572665 Q8N402 240 aa7.06□□□□□ -1.28
CIITA-208ENST00000572665 OR5T1Q8NG75 326 aa7.06□□□□□ -1.28
CIITA-208ENST00000572665 OR2K2Q8NGT1 345 aa7.06□□□□□ -1.28
CIITA-208ENST00000572665 HDHD3Q9BSH5 251 aaPredicted RBP7.06□□□□□ -1.28
CIITA-208ENST00000572665 YTHDF1Q9BYJ9 559 aaKnown RBP7.06□□□□□ -1.28
CIITA-208ENST00000572665 CCDC90BQ9GZT6 254 aa7.06□□□□□ -1.28
CIITA-208ENST00000572665 KCNK15Q9H427 330 aa7.06□□□□□ -1.28
CIITA-208ENST00000572665 TUBA4BQ9H853 241 aa7.06□□□□□ -1.28
CIITA-208ENST00000572665 COA4Q9NYJ1 87 aa7.06□□□□□ -1.28
CIITA-208ENST00000572665 SIGLEC8Q9NYZ4 499 aa7.06□□□□□ -1.28
CIITA-208ENST00000572665 FAM223BA6NKX1 122 aa7.05□□□□□ -1.28
CIITA-208ENST00000572665 FOXI3A8MTJ6 420 aaPredicted RBP7.05□□□□□ -1.28
CIITA-208ENST00000572665 BET1O15155 118 aa7.05□□□□□ -1.28
CIITA-208ENST00000572665 SLC22A5O76082 557 aa7.05□□□□□ -1.28
CIITA-208ENST00000572665 OR2A4O95047 310 aa7.05□□□□□ -1.28
CIITA-208ENST00000572665 MYL9P24844 172 aa7.05□□□□□ -1.28
CIITA-208ENST00000572665 MAP2K4P45985 399 aa7.05□□□□□ -1.28
CIITA-208ENST00000572665 TMEM50BP56557 158 aa7.05□□□□□ -1.28
CIITA-208ENST00000572665 ARFRP1Q13795 201 aa7.05□□□□□ -1.28
CIITA-208ENST00000572665 KLF5Q13887 457 aaPredicted RBP7.05□□□□□ -1.28
CIITA-208ENST00000572665 SLC25A42Q86VD7 318 aa7.05□□□□□ -1.28
CIITA-208ENST00000572665 FAM223AQ8IWN6 122 aa7.05□□□□□ -1.28
CIITA-208ENST00000572665 CABLES2Q9BTV7 478 aa7.05□□□□□ -1.28
CIITA-208ENST00000572665 PARP12Q9H0J9 701 aaKnown RBP7.05□□□□□ -1.28
CIITA-208ENST00000572665 SDHAF2Q9NX18 166 aa7.05□□□□□ -1.28
CIITA-208ENST00000572665 MRPS7Q9Y2R9 242 aaKnown RBP7.05□□□□□ -1.28
CIITA-208ENST00000572665 NBEAL2Q6ZNJ1 2754 aa7.05□□□□□ -1.28
CIITA-208ENST00000572665 TRBV6-7A0A0A0MS04 114 aa7.04□□□□□ -1.28
CIITA-208ENST00000572665 FCGR3AP08637 254 aa7.04□□□□□ -1.28
CIITA-208ENST00000572665 CTXN2P0C2S0 81 aa7.04□□□□□ -1.28
CIITA-208ENST00000572665 SYNJ2BPP57105 145 aa7.04□□□□□ -1.28
CIITA-208ENST00000572665 UBE2KP61086 200 aa7.04□□□□□ -1.28
CIITA-208ENST00000572665 RPS25P62851 125 aaKnown RBP7.04□□□□□ -1.28
CIITA-208ENST00000572665 TNXAQ16473 311 aa7.04□□□□□ -1.28
CIITA-208ENST00000572665 KCTD21Q4G0X4 260 aa7.04□□□□□ -1.28
CIITA-208ENST00000572665 ZNF343Q6P1L6 599 aa7.04□□□□□ -1.28
CIITA-208ENST00000572665 TMEM91Q6ZNR0 172 aa7.04□□□□□ -1.28
CIITA-208ENST00000572665 ZNF575Q86XF7 245 aa7.04□□□□□ -1.28
CIITA-208ENST00000572665 LAX1Q8IWV1 398 aa7.04□□□□□ -1.28
CIITA-208ENST00000572665 OR10R2Q8NGX6 335 aa7.04□□□□□ -1.28
CIITA-208ENST00000572665 MGLLQ99685 303 aa7.04□□□□□ -1.28
CIITA-208ENST00000572665 SPIN2AQ99865 258 aa7.04□□□□□ -1.28
CIITA-208ENST00000572665 SPIN2BQ9BPZ2 258 aa7.04□□□□□ -1.28
CIITA-208ENST00000572665 PRELID3BQ9Y3B1 194 aa7.04□□□□□ -1.28
CIITA-208ENST00000572665 TRAV1-2A0A0B4J238 106 aa7.03□□□□□ -1.28
CIITA-208ENST00000572665 IGKV1-6A0A0C4DH72 117 aa7.03□□□□□ -1.28
CIITA-208ENST00000572665 MSGN1A6NI15 193 aa7.03□□□□□ -1.28
CIITA-208ENST00000572665 SCGNO76038 276 aa7.03□□□□□ -1.28
CIITA-208ENST00000572665 IGLV2-23P01705 113 aa7.03□□□□□ -1.28
CIITA-208ENST00000572665 CRYGBP07316 175 aa7.03□□□□□ -1.28
CIITA-208ENST00000572665 OR9G9P0C7N8 305 aa7.03□□□□□ -1.28
CIITA-208ENST00000572665 GSTT2P0CG29 244 aa7.03□□□□□ -1.28
CIITA-208ENST00000572665 GSTT2BP0CG30 244 aa7.03□□□□□ -1.28
CIITA-208ENST00000572665 CD36P16671 472 aa7.03□□□□□ -1.28
CIITA-208ENST00000572665 CLDN12P56749 244 aa7.03□□□□□ -1.28
CIITA-208ENST00000572665 ATP5G2Q06055 141 aa7.03□□□□□ -1.28
CIITA-208ENST00000572665 HES5Q5TA89 166 aa7.03□□□□□ -1.28
CIITA-208ENST00000572665 MMD2Q8IY49 270 aa7.03□□□□□ -1.28
CIITA-208ENST00000572665 VSTM2AQ8TAG5 236 aa7.03□□□□□ -1.28
CIITA-208ENST00000572665 SRSF12Q8WXF0 261 aaKnown RBP7.03□□□□□ -1.28
CIITA-208ENST00000572665 ACOT12Q8WYK0 555 aa7.03□□□□□ -1.28
CIITA-208ENST00000572665 URB1-AS1Q96HZ7 61 aa7.03□□□□□ -1.28
CIITA-208ENST00000572665 CYYR1Q96J86 154 aa7.03□□□□□ -1.28
CIITA-208ENST00000572665 DCUN1D5Q9BTE7 237 aa7.03□□□□□ -1.28
CIITA-208ENST00000572665 SLC2A8Q9NY64 477 aa7.03□□□□□ -1.28
CIITA-208ENST00000572665 A0A075B6Q4 140 aa7.02□□□□□ -1.29
CIITA-208ENST00000572665 LCE6AA0A183 80 aa7.02□□□□□ -1.29
CIITA-208ENST00000572665 IFITM5A6NNB3 132 aa7.02□□□□□ -1.29
CIITA-208ENST00000572665 TPPPO94811 219 aa7.02□□□□□ -1.29
CIITA-208ENST00000572665 CRYZL1O95825 349 aa7.02□□□□□ -1.29
CIITA-208ENST00000572665 DHFRP00374 187 aa7.02□□□□□ -1.29
CIITA-208ENST00000572665 PSG1P11464 419 aa7.02□□□□□ -1.29
CIITA-208ENST00000572665 HIST1H1DP16402 221 aaKnown RBP7.02□□□□□ -1.29
CIITA-208ENST00000572665 GNB3P16520 340 aa7.02□□□□□ -1.29
CIITA-208ENST00000572665 RAB3BP20337 219 aa7.02□□□□□ -1.29
CIITA-208ENST00000572665 GALP22466 123 aa7.02□□□□□ -1.29
CIITA-208ENST00000572665 DTYMKP23919 212 aa7.02□□□□□ -1.29
CIITA-208ENST00000572665 DUTP33316 252 aaKnown RBP7.02□□□□□ -1.29
CIITA-208ENST00000572665 FABP5Q01469 135 aa7.02□□□□□ -1.29
CIITA-208ENST00000572665 PJVKQ0ZLH3 352 aa7.02□□□□□ -1.29
CIITA-208ENST00000572665 CDK10Q15131 360 aa7.02□□□□□ -1.29
CIITA-208ENST00000572665 TWIST1Q15672 202 aa7.02□□□□□ -1.29
CIITA-208ENST00000572665 PRSS8Q16651 343 aa7.02□□□□□ -1.29
CIITA-208ENST00000572665 IGSF11Q5DX21 431 aa7.02□□□□□ -1.29
CIITA-208ENST00000572665 UBE2UQ5VVX9 321 aa7.02□□□□□ -1.29
CIITA-208ENST00000572665 ZNF773Q6PK81 442 aa7.02□□□□□ -1.29
CIITA-208ENST00000572665 Q6ZS49 121 aa7.02□□□□□ -1.29
CIITA-208ENST00000572665 ZNF367Q7RTV3 350 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms