RNA–Protein interactions for RNA: ENST00000572603.1

RAB40B-207, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-207ENST00000572603 VAMP1P23763 118 aa17.29■□□□□ 0.36
RAB40B-207ENST00000572603 MECP2P51608 486 aaKnown RBP17.29■□□□□ 0.36
RAB40B-207ENST00000572603 AKR1C2P52895 323 aa17.29■□□□□ 0.36
RAB40B-207ENST00000572603 NRARPQ7Z6K4 114 aa17.29■□□□□ 0.36
RAB40B-207ENST00000572603 CENPVQ7Z7K6 275 aaPredicted RBP17.29■□□□□ 0.36
RAB40B-207ENST00000572603 C3orf56Q8N813 242 aa17.29■□□□□ 0.36
RAB40B-207ENST00000572603 MINDY2Q8NBR6 621 aa17.29■□□□□ 0.36
RAB40B-207ENST00000572603 LFNGQ8NES3 379 aa17.29■□□□□ 0.36
RAB40B-207ENST00000572603 OR5AU1Q8NGC0 362 aa17.29■□□□□ 0.36
RAB40B-207ENST00000572603 SPATA3Q8NHX4 192 aa17.29■□□□□ 0.36
RAB40B-207ENST00000572603 NSG2Q9Y328 171 aa17.29■□□□□ 0.36
RAB40B-207ENST00000572603 TRAV6A0A075B6T7 132 aa17.28■□□□□ 0.36
RAB40B-207ENST00000572603 C15orf61A6NNL5 157 aa17.28■□□□□ 0.36
RAB40B-207ENST00000572603 OR4E1P0C645 316 aa17.28■□□□□ 0.36
RAB40B-207ENST00000572603 CD28P10747 220 aa17.28■□□□□ 0.36
RAB40B-207ENST00000572603 ANXA3P12429 323 aa17.28■□□□□ 0.36
RAB40B-207ENST00000572603 RPL27AP46776 148 aaKnown RBP17.28■□□□□ 0.36
RAB40B-207ENST00000572603 DEFA1P59665 94 aa17.28■□□□□ 0.36
RAB40B-207ENST00000572603 DEFA3P59666 94 aa17.28■□□□□ 0.36
RAB40B-207ENST00000572603 OR2B8PP59922 312 aa17.28■□□□□ 0.36
RAB40B-207ENST00000572603 H2BFWTQ7Z2G1 175 aa17.28■□□□□ 0.36
RAB40B-207ENST00000572603 SLC35G3Q8N808 338 aa17.28■□□□□ 0.36
RAB40B-207ENST00000572603 ENKURQ8TC29 256 aa17.28■□□□□ 0.36
RAB40B-207ENST00000572603 ALX4Q9H161 411 aaPredicted RBP17.28■□□□□ 0.36
RAB40B-207ENST00000572603 C9orf170A2RU37 121 aa17.27■□□□□ 0.36
RAB40B-207ENST00000572603 ACTL6BO94805 426 aa17.27■□□□□ 0.36
RAB40B-207ENST00000572603 IGHG4P01861 327 aa17.27■□□□□ 0.36
RAB40B-207ENST00000572603 SLC35B1P78383 322 aa17.27■□□□□ 0.36
RAB40B-207ENST00000572603 SRPXP78539 464 aa17.27■□□□□ 0.36
RAB40B-207ENST00000572603 DHRS2Q13268 280 aa17.27■□□□□ 0.36
RAB40B-207ENST00000572603 AKIRIN2Q53H80 203 aa17.27■□□□□ 0.36
RAB40B-207ENST00000572603 UNQ5815/PRO19632Q6UWF5 114 aa17.27■□□□□ 0.36
RAB40B-207ENST00000572603 ZNF695Q8IW36 515 aa17.27■□□□□ 0.36
RAB40B-207ENST00000572603 C11orf44Q8N8P7 122 aa17.27■□□□□ 0.36
RAB40B-207ENST00000572603 LRTM2Q8N967 370 aa17.27■□□□□ 0.36
RAB40B-207ENST00000572603 DUSP18Q8NEJ0 188 aa17.27■□□□□ 0.36
RAB40B-207ENST00000572603 PALMDQ9NP74 551 aa17.27■□□□□ 0.36
RAB40B-207ENST00000572603 TMEM14BQ9NUH8 114 aa17.27■□□□□ 0.36
RAB40B-207ENST00000572603 MSGN1A6NI15 193 aa17.26■□□□□ 0.35
RAB40B-207ENST00000572603 FBXO24O75426 580 aa17.26■□□□□ 0.35
RAB40B-207ENST00000572603 ATG12O94817 140 aa17.26■□□□□ 0.35
RAB40B-207ENST00000572603 IGLV1-40P01703 118 aa17.26■□□□□ 0.35
RAB40B-207ENST00000572603 HLA-AP01891 365 aaKnown RBP17.26■□□□□ 0.35
RAB40B-207ENST00000572603 OPN1MWP04001 364 aa17.26■□□□□ 0.35
RAB40B-207ENST00000572603 H2AFB2P0C5Z0 115 aa17.26■□□□□ 0.35
RAB40B-207ENST00000572603 OPN1MW2P0DN77 364 aa17.26■□□□□ 0.35
RAB40B-207ENST00000572603 OPN1MW3P0DN78 364 aa17.26■□□□□ 0.35
RAB40B-207ENST00000572603 Q6ZRM9 215 aa17.26■□□□□ 0.35
RAB40B-207ENST00000572603 LYG2Q86SG7 212 aa17.26■□□□□ 0.35
RAB40B-207ENST00000572603 LGI3Q8N145 548 aa17.26■□□□□ 0.35
RAB40B-207ENST00000572603 CASTOR1Q8WTX7 329 aa17.26■□□□□ 0.35
RAB40B-207ENST00000572603 GON7Q9BXV9 100 aa17.26■□□□□ 0.35
RAB40B-207ENST00000572603 FOXA2Q9Y261 457 aaPredicted RBP17.26■□□□□ 0.35
RAB40B-207ENST00000572603 A0A0B4J293 547 aa17.25■□□□□ 0.35
RAB40B-207ENST00000572603 A0A0B4J2A0 478 aa17.25■□□□□ 0.35
RAB40B-207ENST00000572603 A0A1W2PN81 502 aa17.25■□□□□ 0.35
RAB40B-207ENST00000572603 SNAPC5O75971 98 aa17.25■□□□□ 0.35
RAB40B-207ENST00000572603 APELAP0DMC3 54 aa17.25■□□□□ 0.35
RAB40B-207ENST00000572603 CHRNA7P36544 502 aa17.25■□□□□ 0.35
RAB40B-207ENST00000572603 CD83Q01151 205 aa17.25■□□□□ 0.35
RAB40B-207ENST00000572603 NMSQ5H8A3 153 aa17.25■□□□□ 0.35
RAB40B-207ENST00000572603 LYZL2Q7Z4W2 148 aa17.25■□□□□ 0.35
RAB40B-207ENST00000572603 FAM219AQ8IW50 185 aa17.25■□□□□ 0.35
RAB40B-207ENST00000572603 RNF152Q8N8N0 203 aa17.25■□□□□ 0.35
RAB40B-207ENST00000572603 LSM10Q969L4 123 aaKnown RBP17.25■□□□□ 0.35
RAB40B-207ENST00000572603 SPIN2AQ99865 258 aa17.25■□□□□ 0.35
RAB40B-207ENST00000572603 SPIN2BQ9BPZ2 258 aa17.25■□□□□ 0.35
RAB40B-207ENST00000572603 SHPKQ9UHJ6 478 aa17.25■□□□□ 0.35
RAB40B-207ENST00000572603 PRNDQ9UKY0 176 aa17.25■□□□□ 0.35
RAB40B-207ENST00000572603 TEX50A0A1B0GTY4 177 aa17.24■□□□□ 0.35
RAB40B-207ENST00000572603 HMX3A6NHT5 357 aa17.24■□□□□ 0.35
RAB40B-207ENST00000572603 PSMB8P28062 276 aa17.24■□□□□ 0.35
RAB40B-207ENST00000572603 TMEM267Q0VDI3 215 aaPredicted RBP17.24■□□□□ 0.35
RAB40B-207ENST00000572603 FOXE3Q13461 319 aa17.24■□□□□ 0.35
RAB40B-207ENST00000572603 C4orf46Q504U0 113 aa17.24■□□□□ 0.35
RAB40B-207ENST00000572603 SHISA2Q6UWI4 295 aa17.24■□□□□ 0.35
RAB40B-207ENST00000572603 LCNL1Q6ZST4 164 aa17.24■□□□□ 0.35
RAB40B-207ENST00000572603 COMMD1Q8N668 190 aa17.24■□□□□ 0.35
RAB40B-207ENST00000572603 OR4X2Q8NGF9 303 aa17.24■□□□□ 0.35
RAB40B-207ENST00000572603 OR52B4Q8NGK2 314 aa17.24■□□□□ 0.35
RAB40B-207ENST00000572603 GPR146Q96CH1 333 aa17.24■□□□□ 0.35
RAB40B-207ENST00000572603 RRNAD1Q96FB5 475 aaKnown RBP17.24■□□□□ 0.35
RAB40B-207ENST00000572603 FYTTD1Q96QD9 318 aaKnown RBP17.24■□□□□ 0.35
RAB40B-207ENST00000572603 CITED2Q99967 270 aaPredicted RBP17.24■□□□□ 0.35
RAB40B-207ENST00000572603 COMMD5Q9GZQ3 224 aa17.24■□□□□ 0.35
RAB40B-207ENST00000572603 OR51B2Q9Y5P1 312 aa17.24■□□□□ 0.35
RAB40B-207ENST00000572603 DUXBA0A1W2PPF3 345 aa17.23■□□□□ 0.35
RAB40B-207ENST00000572603 IGLC7A0M8Q6 106 aa17.23■□□□□ 0.35
RAB40B-207ENST00000572603 ADARB2-AS1A8MUL3 147 aa17.23■□□□□ 0.35
RAB40B-207ENST00000572603 SPNP16150 400 aa17.23■□□□□ 0.35
RAB40B-207ENST00000572603 RAB25P57735 213 aa17.23■□□□□ 0.35
RAB40B-207ENST00000572603 AARDQ4LEZ3 155 aa17.23■□□□□ 0.35
RAB40B-207ENST00000572603 TEX38Q6PEX7 206 aa17.23■□□□□ 0.35
RAB40B-207ENST00000572603 RNASE11Q8TAA1 199 aaKnown RBP17.23■□□□□ 0.35
RAB40B-207ENST00000572603 FAM110DQ8TAY7 271 aaPredicted RBP17.23■□□□□ 0.35
RAB40B-207ENST00000572603 MYOZ3Q8TDC0 251 aa17.23■□□□□ 0.35
RAB40B-207ENST00000572603 TMEM68Q96MH6 324 aa17.23■□□□□ 0.35
RAB40B-207ENST00000572603 PHB2Q99623 299 aa17.23■□□□□ 0.35
RAB40B-207ENST00000572603 QTRT1Q9BXR0 403 aaKnown RBP17.23■□□□□ 0.35
RAB40B-207ENST00000572603 DUS4LO95620 317 aaKnown RBP17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms