RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 CLN8Q9UBY8 286 aa4.13□□□□□ -1.75
SF3B3-214ENST00000572365 OR52A1Q9UKL2 312 aa4.13□□□□□ -1.75
SF3B3-214ENST00000572365 A0A0A6YYH2 397 aa4.12□□□□□ -1.75
SF3B3-214ENST00000572365 C20orf202A1L168 122 aa4.12□□□□□ -1.75
SF3B3-214ENST00000572365 TVP23AA6NH52 213 aa4.12□□□□□ -1.75
SF3B3-214ENST00000572365 A6NJ64 397 aa4.12□□□□□ -1.75
SF3B3-214ENST00000572365 ZNF705EA8MWA4 302 aaPredicted RBP4.12□□□□□ -1.75
SF3B3-214ENST00000572365 K7EP13 123 aa4.12□□□□□ -1.75
SF3B3-214ENST00000572365 RNF13O43567 381 aa4.12□□□□□ -1.75
SF3B3-214ENST00000572365 CHST1O43916 411 aa4.12□□□□□ -1.75
SF3B3-214ENST00000572365 TIMM8AO60220 97 aaPredicted RBP4.12□□□□□ -1.75
SF3B3-214ENST00000572365 PPBPP02775 128 aa4.12□□□□□ -1.75
SF3B3-214ENST00000572365 OR5H8P0DN80 308 aa4.12□□□□□ -1.75
SF3B3-214ENST00000572365 LAMP1P11279 417 aa4.12□□□□□ -1.75
SF3B3-214ENST00000572365 NR2C1P13056 603 aa4.12□□□□□ -1.75
SF3B3-214ENST00000572365 HLA-GP17693 338 aa4.12□□□□□ -1.75
SF3B3-214ENST00000572365 G0S2P27469 103 aa4.12□□□□□ -1.75
SF3B3-214ENST00000572365 OTX1P32242 354 aaPredicted RBP4.12□□□□□ -1.75
SF3B3-214ENST00000572365 KIR2DS4P43632 304 aa4.12□□□□□ -1.75
SF3B3-214ENST00000572365 EGFEM1PQ0D2K5 195 aa4.12□□□□□ -1.75
SF3B3-214ENST00000572365 GUK1Q16774 197 aa4.12□□□□□ -1.75
SF3B3-214ENST00000572365 ATP6V1FQ16864 119 aa4.12□□□□□ -1.75
SF3B3-214ENST00000572365 MS4A18Q3C1V0 323 aa4.12□□□□□ -1.75
SF3B3-214ENST00000572365 GGTA1PQ4G0N0 100 aa4.12□□□□□ -1.75
SF3B3-214ENST00000572365 TMEM155Q4W5P6 130 aa4.12□□□□□ -1.75
SF3B3-214ENST00000572365 AKIRIN2Q53H80 203 aa4.12□□□□□ -1.75
SF3B3-214ENST00000572365 PYY3Q5JQD4 70 aa4.12□□□□□ -1.75
SF3B3-214ENST00000572365 TCTEX1D4Q5JR98 221 aa4.12□□□□□ -1.75
SF3B3-214ENST00000572365 COL5A1-AS1Q5SY13 56 aa4.12□□□□□ -1.75
SF3B3-214ENST00000572365 C1orf140Q5VVS0 124 aa4.12□□□□□ -1.75
SF3B3-214ENST00000572365 SFXN4Q6P4A7 337 aa4.12□□□□□ -1.75
SF3B3-214ENST00000572365 TNFAIP8L2Q6P589 184 aaPredicted RBP4.12□□□□□ -1.75
SF3B3-214ENST00000572365 C10orf99Q6UWK7 81 aa4.12□□□□□ -1.75
SF3B3-214ENST00000572365 FBXW12Q6X9E4 464 aa4.12□□□□□ -1.75
SF3B3-214ENST00000572365 WDR88Q6ZMY6 472 aa4.12□□□□□ -1.75
SF3B3-214ENST00000572365 ZNF841Q6ZN19 808 aa4.12□□□□□ -1.75
SF3B3-214ENST00000572365 VMO1Q7Z5L0 202 aa4.12□□□□□ -1.75
SF3B3-214ENST00000572365 LRRTM1Q86UE6 522 aa4.12□□□□□ -1.75
SF3B3-214ENST00000572365 C20orf196Q8IYI0 205 aa4.12□□□□□ -1.75
SF3B3-214ENST00000572365 TMEM123Q8N131 208 aa4.12□□□□□ -1.75
SF3B3-214ENST00000572365 C10orf111Q8N326 155 aa4.12□□□□□ -1.75
SF3B3-214ENST00000572365 GVQW1Q8N7I0 195 aa4.12□□□□□ -1.75
SF3B3-214ENST00000572365 FAM86B1Q8N7N1 296 aa4.12□□□□□ -1.75
SF3B3-214ENST00000572365 OR8J2Q8NGG1 315 aa4.12□□□□□ -1.75
SF3B3-214ENST00000572365 OR6N1Q8NGY5 312 aa4.12□□□□□ -1.75
SF3B3-214ENST00000572365 KLF14Q8TD94 323 aaPredicted RBP4.12□□□□□ -1.75
SF3B3-214ENST00000572365 OR2V2Q96R30 315 aa4.12□□□□□ -1.75
SF3B3-214ENST00000572365 SULT4A1Q9BR01 284 aa4.12□□□□□ -1.75
SF3B3-214ENST00000572365 POLR2J3Q9H1A7 115 aaKnown RBP4.12□□□□□ -1.75
SF3B3-214ENST00000572365 TLNRD1Q9H1K6 362 aa4.12□□□□□ -1.75
SF3B3-214ENST00000572365 TMEM38AQ9H6F2 299 aa4.12□□□□□ -1.75
SF3B3-214ENST00000572365 RHOFQ9HBH0 211 aa4.12□□□□□ -1.75
SF3B3-214ENST00000572365 TMEM27Q9HBJ8 222 aa4.12□□□□□ -1.75
SF3B3-214ENST00000572365 AMBNQ9NP70 447 aa4.12□□□□□ -1.75
SF3B3-214ENST00000572365 PARP11Q9NR21 331 aa4.12□□□□□ -1.75
SF3B3-214ENST00000572365 TNFSF18Q9UNG2 199 aa4.12□□□□□ -1.75
SF3B3-214ENST00000572365 ANGPT4Q9Y264 503 aa4.12□□□□□ -1.75
SF3B3-214ENST00000572365 ENPP4Q9Y6X5 453 aa4.12□□□□□ -1.75
SF3B3-214ENST00000572365 A0A1B0GW64 132 aa4.11□□□□□ -1.75
SF3B3-214ENST00000572365 TCRBV4S1A1TA0A5B7 111 aa4.11□□□□□ -1.75
SF3B3-214ENST00000572365 ANKRD20A5PA0PJZ0 165 aa4.11□□□□□ -1.75
SF3B3-214ENST00000572365 C5orf49A4QMS7 147 aa4.11□□□□□ -1.75
SF3B3-214ENST00000572365 G3V3Q6 166 aa4.11□□□□□ -1.75
SF3B3-214ENST00000572365 H3BN98 237 aa4.11□□□□□ -1.75
SF3B3-214ENST00000572365 ARPC1BO15143 372 aaKnown RBP4.11□□□□□ -1.75
SF3B3-214ENST00000572365 ZNF208O43345 1280 aa4.11□□□□□ -1.75
SF3B3-214ENST00000572365 OR10H3O60404 316 aa4.11□□□□□ -1.75
SF3B3-214ENST00000572365 FCN3O75636 299 aa4.11□□□□□ -1.75
SF3B3-214ENST00000572365 OR6A2O95222 327 aa4.11□□□□□ -1.75
SF3B3-214ENST00000572365 IFNA21P01568 189 aa4.11□□□□□ -1.75
SF3B3-214ENST00000572365 CD5P06127 495 aa4.11□□□□□ -1.75
SF3B3-214ENST00000572365 CST2P09228 141 aa4.11□□□□□ -1.75
SF3B3-214ENST00000572365 SFTA3P0C7M3 94 aa4.11□□□□□ -1.75
SF3B3-214ENST00000572365 CALCBP10092 127 aa4.11□□□□□ -1.75
SF3B3-214ENST00000572365 TBPP20226 339 aa4.11□□□□□ -1.75
SF3B3-214ENST00000572365 ACTBP60709 375 aa4.11□□□□□ -1.75
SF3B3-214ENST00000572365 UBE2MP61081 183 aaKnown RBP4.11□□□□□ -1.75
SF3B3-214ENST00000572365 RPL27P61353 136 aaKnown RBP4.11□□□□□ -1.75
SF3B3-214ENST00000572365 CDK5Q00535 292 aa4.11□□□□□ -1.75
SF3B3-214ENST00000572365 FABP5Q01469 135 aa4.11□□□□□ -1.75
SF3B3-214ENST00000572365 TSPAN31Q12999 210 aa4.11□□□□□ -1.75
SF3B3-214ENST00000572365 PSG7Q13046 419 aa4.11□□□□□ -1.75
SF3B3-214ENST00000572365 UBE2V2Q15819 145 aa4.11□□□□□ -1.75
SF3B3-214ENST00000572365 TBC1D28Q2M2D7 210 aa4.11□□□□□ -1.75
SF3B3-214ENST00000572365 SCGB2B2Q4G0G5 96 aa4.11□□□□□ -1.75
SF3B3-214ENST00000572365 KIAA2026Q5HYC2 2103 aa4.11□□□□□ -1.75
SF3B3-214ENST00000572365 DEGS2Q6QHC5 323 aa4.11□□□□□ -1.75
SF3B3-214ENST00000572365 SMARCD3Q6STE5 483 aa4.11□□□□□ -1.75
SF3B3-214ENST00000572365 SLC22A24Q8N4F4 322 aa4.11□□□□□ -1.75
SF3B3-214ENST00000572365 KRTCAP2Q8N6L1 136 aa4.11□□□□□ -1.75
SF3B3-214ENST00000572365 BBS1Q8NFJ9 593 aa4.11□□□□□ -1.75
SF3B3-214ENST00000572365 OR4K5Q8NGD3 323 aa4.11□□□□□ -1.75
SF3B3-214ENST00000572365 OR10AD1Q8NGE0 317 aa4.11□□□□□ -1.75
SF3B3-214ENST00000572365 OR8B3Q8NGG8 313 aa4.11□□□□□ -1.75
SF3B3-214ENST00000572365 OR51G2Q8NGK0 314 aa4.11□□□□□ -1.75
SF3B3-214ENST00000572365 OR52I1Q8NGK6 324 aa4.11□□□□□ -1.75
SF3B3-214ENST00000572365 OR10D4PQ8NGN7 298 aa4.11□□□□□ -1.75
SF3B3-214ENST00000572365 OR4C13Q8NGP0 309 aa4.11□□□□□ -1.75
SF3B3-214ENST00000572365 OR1S2Q8NGQ3 325 aa4.11□□□□□ -1.75
SF3B3-214ENST00000572365 PCNPQ8WW12 178 aaKnown RBP4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms