RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 A0A0G2JK05 382 aa2.92□□□□□ -1.94
SMG6-208ENST00000570874 A0A0G2JLM5 398 aa2.92□□□□□ -1.94
SMG6-208ENST00000570874 UBE2QL1A1L167 161 aa2.92□□□□□ -1.94
SMG6-208ENST00000570874 C5orf63A6NC05 138 aa2.92□□□□□ -1.94
SMG6-208ENST00000570874 A6NIN4 97 aa2.92□□□□□ -1.94
SMG6-208ENST00000570874 FOXI3A8MTJ6 420 aaPredicted RBP2.92□□□□□ -1.94
SMG6-208ENST00000570874 M0R233 179 aa2.92□□□□□ -1.94
SMG6-208ENST00000570874 SULT2B1O00204 365 aa2.92□□□□□ -1.94
SMG6-208ENST00000570874 XKRYO14609 159 aa2.92□□□□□ -1.94
SMG6-208ENST00000570874 CCL25O15444 150 aa2.92□□□□□ -1.94
SMG6-208ENST00000570874 LMX1BO60663 402 aa2.92□□□□□ -1.94
SMG6-208ENST00000570874 ZNF432O94892 652 aa2.92□□□□□ -1.94
SMG6-208ENST00000570874 TTRP02766 147 aa2.92□□□□□ -1.94
SMG6-208ENST00000570874 PFN1P07737 140 aaKnown RBP2.92□□□□□ -1.94
SMG6-208ENST00000570874 UCHL1P09936 223 aa2.92□□□□□ -1.94
SMG6-208ENST00000570874 MYOD1P15172 320 aa2.92□□□□□ -1.94
SMG6-208ENST00000570874 AZU1P20160 251 aa2.92□□□□□ -1.94
SMG6-208ENST00000570874 EVI2AP22794 236 aa2.92□□□□□ -1.94
SMG6-208ENST00000570874 S100A2P29034 98 aa2.92□□□□□ -1.94
SMG6-208ENST00000570874 AGTR1P30556 359 aa2.92□□□□□ -1.94
SMG6-208ENST00000570874 GPR183P32249 361 aa2.92□□□□□ -1.94
SMG6-208ENST00000570874 GALR1P47211 349 aa2.92□□□□□ -1.94
SMG6-208ENST00000570874 EMP1P54849 157 aa2.92□□□□□ -1.94
SMG6-208ENST00000570874 DSCR4P56555 118 aaPredicted RBP2.92□□□□□ -1.94
SMG6-208ENST00000570874 PLP2Q04941 152 aa2.92□□□□□ -1.94
SMG6-208ENST00000570874 FOXF2Q12947 444 aa2.92□□□□□ -1.94
SMG6-208ENST00000570874 ZNF154Q13106 437 aa2.92□□□□□ -1.94
SMG6-208ENST00000570874 CDK5R1Q15078 307 aa2.92□□□□□ -1.94
SMG6-208ENST00000570874 IAH1Q2TAA2 248 aaPredicted RBP2.92□□□□□ -1.94
SMG6-208ENST00000570874 WDR38Q5JTN6 314 aa2.92□□□□□ -1.94
SMG6-208ENST00000570874 TPTE2P1Q5T6R2 138 aa2.92□□□□□ -1.94
SMG6-208ENST00000570874 ZNF66Q6ZN08 573 aa2.92□□□□□ -1.94
SMG6-208ENST00000570874 Q6ZWC4 215 aa2.92□□□□□ -1.94
SMG6-208ENST00000570874 Q75L30 129 aa2.92□□□□□ -1.94
SMG6-208ENST00000570874 GGNQ86UU5 652 aa2.92□□□□□ -1.94
SMG6-208ENST00000570874 C11orf42Q8N5U0 333 aa2.92□□□□□ -1.94
SMG6-208ENST00000570874 TEX45Q8NA69 505 aa2.92□□□□□ -1.94
SMG6-208ENST00000570874 OR5A2Q8NGI9 324 aa2.92□□□□□ -1.94
SMG6-208ENST00000570874 OR51A4Q8NGJ6 313 aa2.92□□□□□ -1.94
SMG6-208ENST00000570874 OR13A1Q8NGR1 328 aa2.92□□□□□ -1.94
SMG6-208ENST00000570874 OR2T4Q8NH00 348 aa2.92□□□□□ -1.94
SMG6-208ENST00000570874 OR2T27Q8NH04 317 aa2.92□□□□□ -1.94
SMG6-208ENST00000570874 RPS4Y2Q8TD47 263 aa2.92□□□□□ -1.94
SMG6-208ENST00000570874 VN1R17PQ8TDU5 208 aa2.92□□□□□ -1.94
SMG6-208ENST00000570874 THEM6Q8WUY1 208 aa2.92□□□□□ -1.94
SMG6-208ENST00000570874 OR5P3Q8WZ94 311 aa2.92□□□□□ -1.94
SMG6-208ENST00000570874 HIST1H2BAQ96A08 127 aa2.92□□□□□ -1.94
SMG6-208ENST00000570874 EEF1AKMT3Q96AZ1 226 aa2.92□□□□□ -1.94
SMG6-208ENST00000570874 ACY3Q96HD9 319 aa2.92□□□□□ -1.94
SMG6-208ENST00000570874 ADGRG7Q96K78 797 aa2.92□□□□□ -1.94
SMG6-208ENST00000570874 PSMG3Q9BT73 122 aaPredicted RBP2.92□□□□□ -1.94
SMG6-208ENST00000570874 PBDC1Q9BVG4 233 aa2.92□□□□□ -1.94
SMG6-208ENST00000570874 KLK13Q9UKR3 277 aa2.92□□□□□ -1.94
SMG6-208ENST00000570874 RAB22AQ9UL26 194 aa2.92□□□□□ -1.94
SMG6-208ENST00000570874 MCTS1Q9ULC4 181 aaKnown RBP2.92□□□□□ -1.94
SMG6-208ENST00000570874 EP300Q09472 2414 aaPredicted RBP2.92□□□□□ -1.94
SMG6-208ENST00000570874 DSCAMO60469 2012 aa2.92□□□□□ -1.94
SMG6-208ENST00000570874 A0A0C4DFX4 3053 aa2.91□□□□□ -1.94
SMG6-208ENST00000570874 DOCK11Q5JSL3 2073 aa2.91□□□□□ -1.94
SMG6-208ENST00000570874 PCNX1Q96RV3 2341 aa2.91□□□□□ -1.94
SMG6-208ENST00000570874 TRAV38-1A0A0B4J264 116 aa2.91□□□□□ -1.94
SMG6-208ENST00000570874 A0A0U1RQV1 116 aa2.91□□□□□ -1.94
SMG6-208ENST00000570874 FAM240AA0A1B0GVK7 77 aa2.91□□□□□ -1.94
SMG6-208ENST00000570874 IFITM5A6NNB3 132 aa2.91□□□□□ -1.94
SMG6-208ENST00000570874 ZNF587BE7ETH6 402 aa2.91□□□□□ -1.94
SMG6-208ENST00000570874 SMKR1H3BMG3 65 aa2.91□□□□□ -1.94
SMG6-208ENST00000570874 GABARAPH6UMI1 98 aa2.91□□□□□ -1.94
SMG6-208ENST00000570874 K7EM74 188 aa2.91□□□□□ -1.94
SMG6-208ENST00000570874 M0R2Z0 102 aa2.91□□□□□ -1.94
SMG6-208ENST00000570874 RBFOX2O43251 390 aaKnown RBP eCLIP2.91□□□□□ -1.94
SMG6-208ENST00000570874 OR2T1O43869 369 aa2.91□□□□□ -1.94
SMG6-208ENST00000570874 PSPNO60542 156 aa2.91□□□□□ -1.94
SMG6-208ENST00000570874 CRLF1O75462 422 aa2.91□□□□□ -1.94
SMG6-208ENST00000570874 SRSF10O75494 262 aaKnown RBP2.91□□□□□ -1.94
SMG6-208ENST00000570874 OR2A4O95047 310 aa2.91□□□□□ -1.94
SMG6-208ENST00000570874 YIF1AO95070 293 aa2.91□□□□□ -1.94
SMG6-208ENST00000570874 NXPH3O95157 252 aa2.91□□□□□ -1.94
SMG6-208ENST00000570874 PMS2P2O95744 297 aa2.91□□□□□ -1.94
SMG6-208ENST00000570874 NRASP01111 189 aa2.91□□□□□ -1.94
SMG6-208ENST00000570874 PGA4P0DJD7 388 aa2.91□□□□□ -1.94
SMG6-208ENST00000570874 PGA3P0DJD8 388 aa2.91□□□□□ -1.94
SMG6-208ENST00000570874 ZNF250P15622 560 aa2.91□□□□□ -1.94
SMG6-208ENST00000570874 ATF1P18846 271 aa2.91□□□□□ -1.94
SMG6-208ENST00000570874 ORM2P19652 201 aa2.91□□□□□ -1.94
SMG6-208ENST00000570874 CSRP1P21291 193 aaKnown RBP2.91□□□□□ -1.94
SMG6-208ENST00000570874 NFYAP23511 347 aaPredicted RBP2.91□□□□□ -1.94
SMG6-208ENST00000570874 GATA3P23771 443 aa2.91□□□□□ -1.94
SMG6-208ENST00000570874 CFPP27918 469 aa2.91□□□□□ -1.94
SMG6-208ENST00000570874 REG1BP48304 166 aa2.91□□□□□ -1.94
SMG6-208ENST00000570874 AMTP48728 403 aa2.91□□□□□ -1.94
SMG6-208ENST00000570874 SELENOPP49908 381 aa2.91□□□□□ -1.94
SMG6-208ENST00000570874 GNG5P63218 68 aa2.91□□□□□ -1.94
SMG6-208ENST00000570874 SLC35A1P78382 337 aa2.91□□□□□ -1.94
SMG6-208ENST00000570874 RPL24P83731 157 aaKnown RBP2.91□□□□□ -1.94
SMG6-208ENST00000570874 TNFAIP6P98066 277 aaPredicted RBP2.91□□□□□ -1.94
SMG6-208ENST00000570874 CLINT1Q14677 625 aa2.91□□□□□ -1.94
SMG6-208ENST00000570874 RAB35Q15286 201 aa2.91□□□□□ -1.94
SMG6-208ENST00000570874 TMEM241Q24JQ0 296 aa2.91□□□□□ -1.94
SMG6-208ENST00000570874 GSG1Q2KHT4 349 aa2.91□□□□□ -1.94
SMG6-208ENST00000570874 DEFB109BQ30KR1 87 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms