RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 SLC35E3Q7Z769 313 aa4.39□□□□□ -1.71
SF3B3-213ENST00000569687 C11orf42Q8N5U0 333 aa4.39□□□□□ -1.71
SF3B3-213ENST00000569687 Q8N7P7 452 aa4.39□□□□□ -1.71
SF3B3-213ENST00000569687 ZNF709Q8N972 641 aa4.39□□□□□ -1.71
SF3B3-213ENST00000569687 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.39□□□□□ -1.71
SF3B3-213ENST00000569687 OR4A5Q8NH83 315 aa4.39□□□□□ -1.71
SF3B3-213ENST00000569687 OSR1Q8TAX0 266 aaPredicted RBP4.39□□□□□ -1.71
SF3B3-213ENST00000569687 LINC01560Q8TB33 94 aa4.39□□□□□ -1.71
SF3B3-213ENST00000569687 TMEM170AQ8WVE7 144 aa4.39□□□□□ -1.71
SF3B3-213ENST00000569687 CCL17Q92583 94 aa4.39□□□□□ -1.71
SF3B3-213ENST00000569687 NEUROG1Q92886 237 aa4.39□□□□□ -1.71
SF3B3-213ENST00000569687 TNFRSF14Q92956 283 aa4.39□□□□□ -1.71
SF3B3-213ENST00000569687 LEAP2Q969E1 77 aa4.39□□□□□ -1.71
SF3B3-213ENST00000569687 TMEM186Q96B77 213 aa4.39□□□□□ -1.71
SF3B3-213ENST00000569687 JMJD8Q96S16 334 aa4.39□□□□□ -1.71
SF3B3-213ENST00000569687 RSG1Q9BU20 258 aa4.39□□□□□ -1.71
SF3B3-213ENST00000569687 ACTR3CQ9C0K3 210 aaPredicted RBP4.39□□□□□ -1.71
SF3B3-213ENST00000569687 VSIRQ9H7M9 311 aa4.39□□□□□ -1.71
SF3B3-213ENST00000569687 NPVFQ9HCQ7 196 aa4.39□□□□□ -1.71
SF3B3-213ENST00000569687 DYNLRB1Q9NP97 96 aa4.39□□□□□ -1.71
SF3B3-213ENST00000569687 HEYLQ9NQ87 328 aaPredicted RBP4.39□□□□□ -1.71
SF3B3-213ENST00000569687 SLC39A9Q9NUM3 307 aa4.39□□□□□ -1.71
SF3B3-213ENST00000569687 VAX2Q9UIW0 290 aa4.39□□□□□ -1.71
SF3B3-213ENST00000569687 USF3Q68DE3 2245 aa4.39□□□□□ -1.71
SF3B3-213ENST00000569687 MAP1BP46821 2468 aaKnown RBP4.39□□□□□ -1.71
SF3B3-213ENST00000569687 POLEQ07864 2286 aa4.39□□□□□ -1.71
SF3B3-213ENST00000569687 DYSFO75923 2080 aa4.39□□□□□ -1.71
SF3B3-213ENST00000569687 CHD8Q9HCK8 2581 aa4.39□□□□□ -1.71
SF3B3-213ENST00000569687 TLN1Q9Y490 2541 aaKnown RBP4.38□□□□□ -1.71
SF3B3-213ENST00000569687 DSCAMO60469 2012 aa4.38□□□□□ -1.71
SF3B3-213ENST00000569687 PLCE1Q9P212 2302 aa4.38□□□□□ -1.71
SF3B3-213ENST00000569687 A0A087WWC5 75 aa4.38□□□□□ -1.71
SF3B3-213ENST00000569687 CTXND1A0A1B0GTU2 59 aa4.38□□□□□ -1.71
SF3B3-213ENST00000569687 TEX50A0A1B0GTY4 177 aa4.38□□□□□ -1.71
SF3B3-213ENST00000569687 UBE2L5PA0A1B0GUS4 154 aa4.38□□□□□ -1.71
SF3B3-213ENST00000569687 MAP1LC3B2A6NCE7 125 aa4.38□□□□□ -1.71
SF3B3-213ENST00000569687 CXorf65A6NEN9 183 aa4.38□□□□□ -1.71
SF3B3-213ENST00000569687 SRRM4A7MD48 611 aaKnown RBP4.38□□□□□ -1.71
SF3B3-213ENST00000569687 B4DEV8 164 aa4.38□□□□□ -1.71
SF3B3-213ENST00000569687 C17orf112F2Z3M2 114 aa4.38□□□□□ -1.71
SF3B3-213ENST00000569687 H0YJW9 148 aa4.38□□□□□ -1.71
SF3B3-213ENST00000569687 H3BQ15 152 aa4.38□□□□□ -1.71
SF3B3-213ENST00000569687 RRHO14718 337 aa4.38□□□□□ -1.71
SF3B3-213ENST00000569687 PLAUP00749 431 aa4.38□□□□□ -1.71
SF3B3-213ENST00000569687 IFNA1P01562 189 aa4.38□□□□□ -1.71
SF3B3-213ENST00000569687 IFNA10P01566 189 aa4.38□□□□□ -1.71
SF3B3-213ENST00000569687 IGKV1D-33P01593 117 aa4.38□□□□□ -1.71
SF3B3-213ENST00000569687 IGKV1-33P01594 117 aa4.38□□□□□ -1.71
SF3B3-213ENST00000569687 IGHV3-7P01780 117 aa4.38□□□□□ -1.71
SF3B3-213ENST00000569687 MT-ND4LP03901 98 aa4.38□□□□□ -1.71
SF3B3-213ENST00000569687 OR13C7P0DN81 318 aa4.38□□□□□ -1.71
SF3B3-213ENST00000569687 BCL2P10415 239 aa4.38□□□□□ -1.71
SF3B3-213ENST00000569687 FGF7P21781 194 aa4.38□□□□□ -1.71
SF3B3-213ENST00000569687 COL8A2P25067 703 aa4.38□□□□□ -1.71
SF3B3-213ENST00000569687 MC5RP33032 325 aa4.38□□□□□ -1.71
SF3B3-213ENST00000569687 GPX4P36969 197 aaPredicted RBP4.38□□□□□ -1.71
SF3B3-213ENST00000569687 OPRK1P41145 380 aa4.38□□□□□ -1.71
SF3B3-213ENST00000569687 LGALS7P47929 136 aa4.38□□□□□ -1.71
SF3B3-213ENST00000569687 TFF3Q07654 80 aa4.38□□□□□ -1.71
SF3B3-213ENST00000569687 HAGHQ16775 308 aa4.38□□□□□ -1.71
SF3B3-213ENST00000569687 BSXQ3C1V8 233 aa4.38□□□□□ -1.71
SF3B3-213ENST00000569687 ACOT6Q3I5F7 207 aaPredicted RBP4.38□□□□□ -1.71
SF3B3-213ENST00000569687 FAM209BQ5JX69 171 aa4.38□□□□□ -1.71
SF3B3-213ENST00000569687 ZNF787Q6DD87 383 aa4.38□□□□□ -1.71
SF3B3-213ENST00000569687 ACSM6Q6P461 480 aa4.38□□□□□ -1.71
SF3B3-213ENST00000569687 FAM122CQ6P4D5 195 aa4.38□□□□□ -1.71
SF3B3-213ENST00000569687 TMEM88Q6PEY1 159 aa4.38□□□□□ -1.71
SF3B3-213ENST00000569687 ZNF841Q6ZN19 808 aa4.38□□□□□ -1.71
SF3B3-213ENST00000569687 ZGRF1Q86YA3 2104 aa4.38□□□□□ -1.71
SF3B3-213ENST00000569687 VKORC1L1Q8N0U8 176 aa4.38□□□□□ -1.71
SF3B3-213ENST00000569687 ABHD12Q8N2K0 398 aa4.38□□□□□ -1.71
SF3B3-213ENST00000569687 MUC15Q8N387 334 aa4.38□□□□□ -1.71
SF3B3-213ENST00000569687 LY6G5BQ8NDX9 201 aa4.38□□□□□ -1.71
SF3B3-213ENST00000569687 OR10G9Q8NGN4 311 aa4.38□□□□□ -1.71
SF3B3-213ENST00000569687 OR10G7Q8NGN6 311 aa4.38□□□□□ -1.71
SF3B3-213ENST00000569687 OR13D1Q8NGV5 346 aa4.38□□□□□ -1.71
SF3B3-213ENST00000569687 OR5B3Q8NH48 314 aa4.38□□□□□ -1.71
SF3B3-213ENST00000569687 OR9G1Q8NH87 305 aa4.38□□□□□ -1.71
SF3B3-213ENST00000569687 C8orf46Q8TAG6 207 aa4.38□□□□□ -1.71
SF3B3-213ENST00000569687 CA5BP1Q8WTZ4 195 aa4.38□□□□□ -1.71
SF3B3-213ENST00000569687 RAB1CQ92928 201 aa4.38□□□□□ -1.71
SF3B3-213ENST00000569687 LHX4Q969G2 390 aa4.38□□□□□ -1.71
SF3B3-213ENST00000569687 NEIL1Q96FI4 390 aaPredicted RBP4.38□□□□□ -1.71
SF3B3-213ENST00000569687 NABP2Q9BQ15 211 aa4.38□□□□□ -1.71
SF3B3-213ENST00000569687 NPCDR1Q9BY65 106 aa4.38□□□□□ -1.71
SF3B3-213ENST00000569687 MAP1LC3BQ9GZQ8 125 aa4.38□□□□□ -1.71
SF3B3-213ENST00000569687 SLC35D1Q9NTN3 355 aa4.38□□□□□ -1.71
SF3B3-213ENST00000569687 TMEM242Q9NWH2 141 aa4.38□□□□□ -1.71
SF3B3-213ENST00000569687 CTSZQ9UBR2 303 aa4.38□□□□□ -1.71
SF3B3-213ENST00000569687 RALYQ9UKM9 306 aaKnown RBP4.38□□□□□ -1.71
SF3B3-213ENST00000569687 LSM4Q9Y4Z0 139 aaKnown RBP4.38□□□□□ -1.71
SF3B3-213ENST00000569687 OR51B2Q9Y5P1 312 aa4.38□□□□□ -1.71
SF3B3-213ENST00000569687 A0A1W2PPH5 198 aa4.37□□□□□ -1.71
SF3B3-213ENST00000569687 SMCO3A2RU48 225 aa4.37□□□□□ -1.71
SF3B3-213ENST00000569687 TMEM250H0YL14 139 aa4.37□□□□□ -1.71
SF3B3-213ENST00000569687 IGLV1-47P01700 117 aa4.37□□□□□ -1.71
SF3B3-213ENST00000569687 IGHV2-70P01814 119 aa4.37□□□□□ -1.71
SF3B3-213ENST00000569687 APOA2P02652 100 aa4.37□□□□□ -1.71
SF3B3-213ENST00000569687 CRYBA1P05813 215 aa4.37□□□□□ -1.71
SF3B3-213ENST00000569687 IGHV1-8P0DP01 117 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms