RNA–Protein interactions for RNA: ENST00000568770.5

CDH13-211, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-211ENST00000568770 SRSF8Q9BRL6 282 aaKnown RBP4.11□□□□□ -1.75
CDH13-211ENST00000568770 MFFQ9GZY8 342 aa4.11□□□□□ -1.75
CDH13-211ENST00000568770 GABARAPL1Q9H0R8 117 aa4.11□□□□□ -1.75
CDH13-211ENST00000568770 IMPAD1Q9NX62 359 aa4.11□□□□□ -1.75
CDH13-211ENST00000568770 OR1A1Q9P1Q5 309 aa4.11□□□□□ -1.75
CDH13-211ENST00000568770 EXOSC1Q9Y3B2 195 aaKnown RBP4.11□□□□□ -1.75
CDH13-211ENST00000568770 DNAH11Q96DT5 4516 aa4.11□□□□□ -1.75
CDH13-211ENST00000568770 TRAV8-7A0A075B6U6 113 aa4.1□□□□□ -1.75
CDH13-211ENST00000568770 SRRM4A7MD48 611 aaKnown RBP4.1□□□□□ -1.75
CDH13-211ENST00000568770 A8MWP6 167 aa4.1□□□□□ -1.75
CDH13-211ENST00000568770 ITGB1BP1O14713 200 aa4.1□□□□□ -1.75
CDH13-211ENST00000568770 GGCTO75223 188 aaKnown RBP4.1□□□□□ -1.75
CDH13-211ENST00000568770 OR2J3O76001 311 aa4.1□□□□□ -1.75
CDH13-211ENST00000568770 IGHV3-23P01764 117 aa4.1□□□□□ -1.75
CDH13-211ENST00000568770 GABRB1P18505 474 aa4.1□□□□□ -1.75
CDH13-211ENST00000568770 ZBTB25P24278 435 aa4.1□□□□□ -1.75
CDH13-211ENST00000568770 CAPGP40121 348 aa4.1□□□□□ -1.75
CDH13-211ENST00000568770 CEACAM6P40199 344 aa4.1□□□□□ -1.75
CDH13-211ENST00000568770 SEC61BP60468 96 aaKnown RBP4.1□□□□□ -1.75
CDH13-211ENST00000568770 SNRPGP62308 76 aaKnown RBP4.1□□□□□ -1.75
CDH13-211ENST00000568770 TNXAQ16473 311 aa4.1□□□□□ -1.75
CDH13-211ENST00000568770 SLC25A30Q5SVS4 291 aa4.1□□□□□ -1.75
CDH13-211ENST00000568770 MEDAGQ5VYS4 303 aa4.1□□□□□ -1.75
CDH13-211ENST00000568770 XAF1Q6GPH4 301 aa4.1□□□□□ -1.75
CDH13-211ENST00000568770 RBPMS2Q6ZRY4 209 aaKnown RBP4.1□□□□□ -1.75
CDH13-211ENST00000568770 NECAP1Q8NC96 275 aa4.1□□□□□ -1.75
CDH13-211ENST00000568770 OR13C5Q8NGS8 318 aa4.1□□□□□ -1.75
CDH13-211ENST00000568770 SETD6Q8TBK2 473 aa4.1□□□□□ -1.75
CDH13-211ENST00000568770 SRSF12Q8WXF0 261 aaKnown RBP4.1□□□□□ -1.75
CDH13-211ENST00000568770 ACOT12Q8WYK0 555 aa4.1□□□□□ -1.75
CDH13-211ENST00000568770 HARBI1Q96MB7 349 aa4.1□□□□□ -1.75
CDH13-211ENST00000568770 RARRES2Q99969 163 aa4.1□□□□□ -1.75
CDH13-211ENST00000568770 FAAP24Q9BTP7 215 aa4.1□□□□□ -1.75
CDH13-211ENST00000568770 SLC35D1Q9NTN3 355 aa4.1□□□□□ -1.75
CDH13-211ENST00000568770 CKLFQ9UBR5 152 aa4.1□□□□□ -1.75
CDH13-211ENST00000568770 ZNF221Q9UK13 617 aa4.1□□□□□ -1.75
CDH13-211ENST00000568770 POMPQ9Y244 141 aa4.1□□□□□ -1.75
CDH13-211ENST00000568770 TRAV25A0A0B4J276 109 aa4.09□□□□□ -1.75
CDH13-211ENST00000568770 A0A1W2PPK0 400 aa4.09□□□□□ -1.75
CDH13-211ENST00000568770 SNTNA6NMZ2 147 aa4.09□□□□□ -1.75
CDH13-211ENST00000568770 M0R1X1 148 aa4.09□□□□□ -1.75
CDH13-211ENST00000568770 DEFB4AO15263 64 aa4.09□□□□□ -1.75
CDH13-211ENST00000568770 S1PR2O95136 353 aa4.09□□□□□ -1.75
CDH13-211ENST00000568770 NAPSAO96009 420 aa4.09□□□□□ -1.75
CDH13-211ENST00000568770 LIMS3P0CW19 117 aa4.09□□□□□ -1.75
CDH13-211ENST00000568770 LIMS4P0CW20 117 aa4.09□□□□□ -1.75
CDH13-211ENST00000568770 MAP2K4P45985 399 aa4.09□□□□□ -1.75
CDH13-211ENST00000568770 MFAP2P55001 183 aa4.09□□□□□ -1.75
CDH13-211ENST00000568770 PRSS8Q16651 343 aa4.09□□□□□ -1.75
CDH13-211ENST00000568770 FAM106AQ4KMX7 169 aa4.09□□□□□ -1.75
CDH13-211ENST00000568770 CCDC58Q4VC31 144 aa4.09□□□□□ -1.75
CDH13-211ENST00000568770 MZT2BQ6NZ67 158 aa4.09□□□□□ -1.75
CDH13-211ENST00000568770 RPL22L1Q6P5R6 122 aaKnown RBP4.09□□□□□ -1.75
CDH13-211ENST00000568770 ZNF880Q6PDB4 577 aa4.09□□□□□ -1.75
CDH13-211ENST00000568770 CLEC19AQ6UXS0 136 aa4.09□□□□□ -1.75
CDH13-211ENST00000568770 UNQ9165/PRO28630Q6UXU0 137 aa4.09□□□□□ -1.75
CDH13-211ENST00000568770 IDO2Q6ZQW0 420 aa4.09□□□□□ -1.75
CDH13-211ENST00000568770 C6orf201Q7Z4U5 140 aa4.09□□□□□ -1.75
CDH13-211ENST00000568770 SLC38A6Q8IZM9 456 aa4.09□□□□□ -1.75
CDH13-211ENST00000568770 TTC9CQ8N5M4 171 aa4.09□□□□□ -1.75
CDH13-211ENST00000568770 MAPKAPK5-AS1Q8N8E1 139 aa4.09□□□□□ -1.75
CDH13-211ENST00000568770 OR11H2Q8NH07 326 aa4.09□□□□□ -1.75
CDH13-211ENST00000568770 OR5B3Q8NH48 314 aa4.09□□□□□ -1.75
CDH13-211ENST00000568770 PTX4Q96A99 478 aa4.09□□□□□ -1.75
CDH13-211ENST00000568770 CSTL1Q9H114 145 aa4.09□□□□□ -1.75
CDH13-211ENST00000568770 C11orf68Q9H3H3 251 aaKnown RBP4.09□□□□□ -1.75
CDH13-211ENST00000568770 CHMP1AQ9HD42 196 aaPredicted RBP4.09□□□□□ -1.75
CDH13-211ENST00000568770 AMBNQ9NP70 447 aa4.09□□□□□ -1.75
CDH13-211ENST00000568770 MED4Q9NPJ6 270 aa4.09□□□□□ -1.75
CDH13-211ENST00000568770 S4R3C0 116 aa4.09□□□□□ -1.75
CDH13-211ENST00000568770 C11orf94C9JXX5 98 aa4.08□□□□□ -1.76
CDH13-211ENST00000568770 NACAE9PAV3 2078 aa4.08□□□□□ -1.76
CDH13-211ENST00000568770 M0R2N4 97 aa4.08□□□□□ -1.76
CDH13-211ENST00000568770 SCTP09683 121 aa4.08□□□□□ -1.76
CDH13-211ENST00000568770 C8orf88P0DMB2 117 aa4.08□□□□□ -1.76
CDH13-211ENST00000568770 CBX3Q13185 183 aa4.08□□□□□ -1.76
CDH13-211ENST00000568770 GLT8D1Q68CQ7 371 aa4.08□□□□□ -1.76
CDH13-211ENST00000568770 OR4A47Q6IF82 309 aa4.08□□□□□ -1.76
CDH13-211ENST00000568770 C19orf35Q6ZS72 473 aa4.08□□□□□ -1.76
CDH13-211ENST00000568770 OR52I1Q8NGK6 324 aa4.08□□□□□ -1.76
CDH13-211ENST00000568770 SMIM19Q96E16 107 aa4.08□□□□□ -1.76
CDH13-211ENST00000568770 GALNT14Q96FL9 552 aa4.08□□□□□ -1.76
CDH13-211ENST00000568770 NEDD4LQ96PU5 975 aa4.08□□□□□ -1.76
CDH13-211ENST00000568770 SPIN2AQ99865 258 aa4.08□□□□□ -1.76
CDH13-211ENST00000568770 SPAG8Q99932 426 aaPredicted RBP4.08□□□□□ -1.76
CDH13-211ENST00000568770 SPIN2BQ9BPZ2 258 aa4.08□□□□□ -1.76
CDH13-211ENST00000568770 C1QTNF4Q9BXJ3 329 aa4.08□□□□□ -1.76
CDH13-211ENST00000568770 C5orf66Q9H5L9 145 aa4.08□□□□□ -1.76
CDH13-211ENST00000568770 ZNF430Q9H8G1 570 aaPredicted RBP4.08□□□□□ -1.76
CDH13-211ENST00000568770 DMBT1Q9UGM3 2413 aaPredicted RBP4.07□□□□□ -1.76
CDH13-211ENST00000568770 APOBP04114 4563 aaKnown RBP4.07□□□□□ -1.76
CDH13-211ENST00000568770 SRRM2Q9UQ35 2752 aaKnown RBP4.07□□□□□ -1.76
CDH13-211ENST00000568770 IGHV4-4A0A075B6R2 117 aa4.07□□□□□ -1.76
CDH13-211ENST00000568770 IGHV3-35A0A0C4DH35 117 aa4.07□□□□□ -1.76
CDH13-211ENST00000568770 IGKV1-6A0A0C4DH72 117 aa4.07□□□□□ -1.76
CDH13-211ENST00000568770 TRBV5-5A0A0J9YX44 114 aa4.07□□□□□ -1.76
CDH13-211ENST00000568770 FAM90A26D6RGX4 464 aa4.07□□□□□ -1.76
CDH13-211ENST00000568770 DYNC1I1O14576 645 aa4.07□□□□□ -1.76
CDH13-211ENST00000568770 GYG2O15488 501 aa4.07□□□□□ -1.76
CDH13-211ENST00000568770 OGG1O15527 345 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms