RNA–Protein interactions for RNA: ENST00000568744.1

CYLD-213, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 2

Gene CYLD, Length 370 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-213ENST00000568744 CLVS2Q5SYC1 327 aa1.77□□□□□ -2.13
CYLD-213ENST00000568744 RPP25LQ8N5L8 163 aaKnown RBP1.77□□□□□ -2.13
CYLD-213ENST00000568744 PAQR5Q9NXK6 330 aaPredicted RBP1.77□□□□□ -2.13
CYLD-213ENST00000568744 USE1Q9NZ43 259 aa1.77□□□□□ -2.13
CYLD-213ENST00000568744 C3orf18Q9UK00 162 aa1.77□□□□□ -2.13
CYLD-213ENST00000568744 MALRD1Q5VYJ5 2156 aa1.76□□□□□ -2.13
CYLD-213ENST00000568744 ZFHX2Q9C0A1 2572 aaPredicted RBP1.76□□□□□ -2.13
CYLD-213ENST00000568744 MYH11P35749 1972 aa1.76□□□□□ -2.13
CYLD-213ENST00000568744 LRRN3E7EW58 273 aa1.76□□□□□ -2.13
CYLD-213ENST00000568744 SLC16A4O15374 487 aa1.76□□□□□ -2.13
CYLD-213ENST00000568744 CIAO1O76071 339 aa1.76□□□□□ -2.13
CYLD-213ENST00000568744 MAGEA2P43356 314 aa1.76□□□□□ -2.13
CYLD-213ENST00000568744 OR4D2P58180 307 aa1.76□□□□□ -2.13
CYLD-213ENST00000568744 COTL1Q14019 142 aa1.76□□□□□ -2.13
CYLD-213ENST00000568744 RAB8BQ92930 207 aa1.76□□□□□ -2.13
CYLD-213ENST00000568744 HSPB9Q9BQS6 159 aa1.76□□□□□ -2.13
CYLD-213ENST00000568744 CHST6Q9GZX3 395 aa1.76□□□□□ -2.13
CYLD-213ENST00000568744 XAGE1AQ9HD64 81 aa1.76□□□□□ -2.13
CYLD-213ENST00000568744 CCL5P13501 91 aa1.75□□□□□ -2.13
CYLD-213ENST00000568744 KCNE1P15382 129 aa1.75□□□□□ -2.13
CYLD-213ENST00000568744 MYL12AP19105 171 aa1.75□□□□□ -2.13
CYLD-213ENST00000568744 HLA-DMBP28068 263 aa1.75□□□□□ -2.13
CYLD-213ENST00000568744 POLR2GP62487 172 aaKnown RBP eCLIP1.75□□□□□ -2.13
CYLD-213ENST00000568744 TNFAIP6P98066 277 aaPredicted RBP1.75□□□□□ -2.13
CYLD-213ENST00000568744 MOGQ16653 247 aa1.75□□□□□ -2.13
CYLD-213ENST00000568744 ACSM3Q53FZ2 586 aa1.75□□□□□ -2.13
CYLD-213ENST00000568744 FAM173BQ6P4H8 233 aa1.75□□□□□ -2.13
CYLD-213ENST00000568744 FP248Q71RG6 208 aaPredicted RBP1.75□□□□□ -2.13
CYLD-213ENST00000568744 GID4Q8IVV7 300 aa1.75□□□□□ -2.13
CYLD-213ENST00000568744 C10orf105Q8TEF2 133 aa1.75□□□□□ -2.13
CYLD-213ENST00000568744 ANGPT4Q9Y264 503 aa1.75□□□□□ -2.13
CYLD-213ENST00000568744 PCDH15Q96QU1 1955 aa1.74□□□□□ -2.13
CYLD-213ENST00000568744 GREB1Q4ZG55 1949 aa1.74□□□□□ -2.13
CYLD-213ENST00000568744 EVC2Q86UK5 1308 aa1.74□□□□□ -2.13
CYLD-213ENST00000568744 MEIS3P1A6NDR6 274 aa1.74□□□□□ -2.13
CYLD-213ENST00000568744 GGT3PA6NGU5 568 aa1.74□□□□□ -2.13
CYLD-213ENST00000568744 MSMBP08118 114 aa1.74□□□□□ -2.13
CYLD-213ENST00000568744 UCHL3P15374 230 aa1.74□□□□□ -2.13
CYLD-213ENST00000568744 FAM27BQ5VT28 67 aa1.74□□□□□ -2.13
CYLD-213ENST00000568744 ZNF550Q7Z398 422 aa1.74□□□□□ -2.13
CYLD-213ENST00000568744 RPS19BP1Q86WX3 136 aaKnown RBP1.74□□□□□ -2.13
CYLD-213ENST00000568744 OR1M1Q8NGA1 313 aa1.74□□□□□ -2.13
CYLD-213ENST00000568744 DDI1Q8WTU0 396 aa1.74□□□□□ -2.13
CYLD-213ENST00000568744 MBD3L1Q8WWY6 194 aa1.74□□□□□ -2.13
CYLD-213ENST00000568744 ANKRD7Q92527 254 aa1.74□□□□□ -2.13
CYLD-213ENST00000568744 SOX21Q9Y651 276 aaPredicted RBP1.74□□□□□ -2.13
CYLD-213ENST00000568744 FREM1Q5H8C1 2179 aa1.74□□□□□ -2.13
CYLD-213ENST00000568744 LAMB2P55268 1798 aa1.73□□□□□ -2.13
CYLD-213ENST00000568744 F8W036 122 aa1.73□□□□□ -2.13
CYLD-213ENST00000568744 CCR7P32248 378 aa1.73□□□□□ -2.13
CYLD-213ENST00000568744 EMX1Q04741 257 aaPredicted RBP1.73□□□□□ -2.13
CYLD-213ENST00000568744 ELOBQ15370 118 aa1.73□□□□□ -2.13
CYLD-213ENST00000568744 ARHGAP11BQ3KRB8 267 aa1.73□□□□□ -2.13
CYLD-213ENST00000568744 ROPN1LQ96C74 230 aa1.73□□□□□ -2.13
CYLD-213ENST00000568744 C21orf140B9A014 251 aa1.72□□□□□ -2.13
CYLD-213ENST00000568744 SLC22A1O15245 554 aa1.72□□□□□ -2.13
CYLD-213ENST00000568744 RPSAP08865 295 aaKnown RBP1.72□□□□□ -2.13
CYLD-213ENST00000568744 SRP19P09132 144 aaKnown RBP1.72□□□□□ -2.13
CYLD-213ENST00000568744 FAM228BP0C875 321 aa1.72□□□□□ -2.13
CYLD-213ENST00000568744 SULT1A3P0DMM9 295 aa1.72□□□□□ -2.13
CYLD-213ENST00000568744 SULT1A4P0DMN0 295 aa1.72□□□□□ -2.13
CYLD-213ENST00000568744 EIF2B2P49770 351 aaKnown RBP1.72□□□□□ -2.13
CYLD-213ENST00000568744 AP2S1P53680 142 aaPredicted RBP1.72□□□□□ -2.13
CYLD-213ENST00000568744 TCL1AP56279 114 aa1.72□□□□□ -2.13
CYLD-213ENST00000568744 NAA20P61599 178 aa1.72□□□□□ -2.13
CYLD-213ENST00000568744 COQ5Q5HYK3 327 aa1.72□□□□□ -2.13
CYLD-213ENST00000568744 RSL24D1Q9UHA3 163 aaKnown RBP1.72□□□□□ -2.13
CYLD-213ENST00000568744 FUT9Q9Y231 359 aa1.72□□□□□ -2.13
CYLD-213ENST00000568744 HELZ2Q9BYK8 2649 aaKnown RBP1.72□□□□□ -2.13
CYLD-213ENST00000568744 IGKV2-40A0A087WW87 121 aaPredicted RBP1.71□□□□□ -2.14
CYLD-213ENST00000568744 IGKV3D-7A0A0C4DH55 119 aa1.71□□□□□ -2.14
CYLD-213ENST00000568744 IGKV3OR2-268A0A0C4DH90 116 aa1.71□□□□□ -2.14
CYLD-213ENST00000568744 OR51F1A6NGY5 319 aa1.71□□□□□ -2.14
CYLD-213ENST00000568744 IGKV2D-40P01614 121 aaPredicted RBP1.71□□□□□ -2.14
CYLD-213ENST00000568744 MARCKSL1P49006 195 aa1.71□□□□□ -2.14
CYLD-213ENST00000568744 CAV1Q03135 178 aa1.71□□□□□ -2.14
CYLD-213ENST00000568744 CDK5R1Q15078 307 aa1.71□□□□□ -2.14
CYLD-213ENST00000568744 Q1T7F1 81 aa1.71□□□□□ -2.14
CYLD-213ENST00000568744 GLT8D1Q68CQ7 371 aa1.71□□□□□ -2.14
CYLD-213ENST00000568744 OR51D1Q8NGF3 324 aa1.71□□□□□ -2.14
CYLD-213ENST00000568744 OR8D2Q9GZM6 311 aa1.71□□□□□ -2.14
CYLD-213ENST00000568744 SCAF11Q99590 1463 aaKnown RBP1.7□□□□□ -2.14
CYLD-213ENST00000568744 TRAPPC2LH3BP13 241 aa1.7□□□□□ -2.14
CYLD-213ENST00000568744 NOS1APO75052 506 aaPredicted RBP1.7□□□□□ -2.14
CYLD-213ENST00000568744 KRT75O95678 551 aa1.7□□□□□ -2.14
CYLD-213ENST00000568744 EVX1P49640 407 aa1.7□□□□□ -2.14
CYLD-213ENST00000568744 DYNAPQ8N1N2 210 aa1.7□□□□□ -2.14
CYLD-213ENST00000568744 DEFB125Q8N687 156 aa1.7□□□□□ -2.14
CYLD-213ENST00000568744 CNBD2Q96M20 576 aa1.7□□□□□ -2.14
CYLD-213ENST00000568744 KRTAP4-1Q9BYQ7 146 aa1.7□□□□□ -2.14
CYLD-213ENST00000568744 OR51I1Q9H343 314 aa1.7□□□□□ -2.14
CYLD-213ENST00000568744 BAZ2BQ9UIF8 2168 aaKnown RBP1.69□□□□□ -2.14
CYLD-213ENST00000568744 IGKV1D-43A0A0B4J1Z2 117 aa1.69□□□□□ -2.14
CYLD-213ENST00000568744 ACOX3O15254 700 aa1.69□□□□□ -2.14
CYLD-213ENST00000568744 UBBP0CG47 229 aa1.69□□□□□ -2.14
CYLD-213ENST00000568744 NDUFA5Q16718 116 aa1.69□□□□□ -2.14
CYLD-213ENST00000568744 CDKL4Q5MAI5 379 aa1.69□□□□□ -2.14
CYLD-213ENST00000568744 CD200R1LQ6Q8B3 271 aa1.69□□□□□ -2.14
CYLD-213ENST00000568744 OR8B3Q8NGG8 313 aa1.69□□□□□ -2.14
CYLD-213ENST00000568744 CYSTM1Q9H1C7 97 aa1.69□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms