RNA–Protein interactions for RNA: ENST00000567003.1

PALB2-205, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-205ENST00000567003 HIST1H1BP16401 226 aaKnown RBP11.43□□□□□ -0.58
PALB2-205ENST00000567003 ATF4P18848 351 aaPredicted RBP11.43□□□□□ -0.58
PALB2-205ENST00000567003 MAS1LP35410 378 aa11.43□□□□□ -0.58
PALB2-205ENST00000567003 NANOS2P60321 138 aaKnown RBP11.43□□□□□ -0.58
PALB2-205ENST00000567003 ZNF124Q15973 351 aa11.43□□□□□ -0.58
PALB2-205ENST00000567003 KLK9Q2XQG4 91 aa11.43□□□□□ -0.58
PALB2-205ENST00000567003 Q6ZS49 121 aa11.43□□□□□ -0.58
PALB2-205ENST00000567003 OR5B3Q8NH48 314 aa11.43□□□□□ -0.58
PALB2-205ENST00000567003 VSTM2AQ8TAG5 236 aa11.43□□□□□ -0.58
PALB2-205ENST00000567003 ZNF502Q8TBZ5 544 aa11.43□□□□□ -0.58
PALB2-205ENST00000567003 MARC2Q969Z3 335 aa11.43□□□□□ -0.58
PALB2-205ENST00000567003 SPAG8Q99932 426 aaPredicted RBP11.43□□□□□ -0.58
PALB2-205ENST00000567003 KLK9Q9UKQ9 250 aa11.43□□□□□ -0.58
PALB2-205ENST00000567003 UFC1Q9Y3C8 167 aa11.43□□□□□ -0.58
PALB2-205ENST00000567003 UBE2CO00762 179 aa11.42□□□□□ -0.58
PALB2-205ENST00000567003 TNFSF12O43508 249 aa11.42□□□□□ -0.58
PALB2-205ENST00000567003 DHFRP00374 187 aa11.42□□□□□ -0.58
PALB2-205ENST00000567003 HLA-GP17693 338 aa11.42□□□□□ -0.58
PALB2-205ENST00000567003 RPL8P62917 257 aaKnown RBP11.42□□□□□ -0.58
PALB2-205ENST00000567003 OGFRL1Q5TC84 451 aaPredicted RBP11.42□□□□□ -0.58
PALB2-205ENST00000567003 PLET1Q6UQ28 207 aa11.42□□□□□ -0.58
PALB2-205ENST00000567003 NUDCD2Q8WVJ2 157 aa11.42□□□□□ -0.58
PALB2-205ENST00000567003 TMEM190Q8WZ59 177 aa11.42□□□□□ -0.58
PALB2-205ENST00000567003 C5orf66Q9H5L9 145 aa11.42□□□□□ -0.58
PALB2-205ENST00000567003 FBXL17Q9UF56 701 aa11.42□□□□□ -0.58
PALB2-205ENST00000567003 TRAV3A0A0B4J244 114 aa11.41□□□□□ -0.58
PALB2-205ENST00000567003 KIR2DL5BA0A0G2JN68 375 aa11.41□□□□□ -0.58
PALB2-205ENST00000567003 KIR2DL5BA0A0G2JPC4 375 aa11.41□□□□□ -0.58
PALB2-205ENST00000567003 TSPAN4O14817 238 aa11.41□□□□□ -0.58
PALB2-205ENST00000567003 ZNF207O43670 478 aaKnown RBP11.41□□□□□ -0.58
PALB2-205ENST00000567003 GALP22466 123 aa11.41□□□□□ -0.58
PALB2-205ENST00000567003 OR2B8PP59922 312 aa11.41□□□□□ -0.58
PALB2-205ENST00000567003 TRAM1Q15629 374 aa11.41□□□□□ -0.58
PALB2-205ENST00000567003 APRG1Q8IVJ8 170 aa11.41□□□□□ -0.58
PALB2-205ENST00000567003 KIR2DL5AQ8N109 375 aa11.41□□□□□ -0.58
PALB2-205ENST00000567003 MFSD4AQ8N468 514 aa11.41□□□□□ -0.58
PALB2-205ENST00000567003 TMEM217Q8N7C4 229 aa11.41□□□□□ -0.58
PALB2-205ENST00000567003 KIR2DL5BQ8NHK3 375 aa11.41□□□□□ -0.58
PALB2-205ENST00000567003 GATAD1Q8WUU5 269 aa11.41□□□□□ -0.58
PALB2-205ENST00000567003 CXorf58Q96LI9 332 aa11.41□□□□□ -0.58
PALB2-205ENST00000567003 HSD17B10Q99714 261 aaKnown RBP11.41□□□□□ -0.58
PALB2-205ENST00000567003 ZNF436Q9C0F3 470 aaPredicted RBP11.41□□□□□ -0.58
PALB2-205ENST00000567003 ATG5Q9H1Y0 275 aa11.41□□□□□ -0.58
PALB2-205ENST00000567003 PGPEP1Q9NXJ5 209 aa11.41□□□□□ -0.58
PALB2-205ENST00000567003 SCN3BQ9NY72 215 aa11.41□□□□□ -0.58
PALB2-205ENST00000567003 IGHV3-21A0A0B4J1V1 117 aa11.4□□□□□ -0.58
PALB2-205ENST00000567003 IGLC7A0M8Q6 106 aa11.4□□□□□ -0.58
PALB2-205ENST00000567003 SMIM30A4D0T7 59 aa11.4□□□□□ -0.58
PALB2-205ENST00000567003 OR2T8A6NH00 312 aa11.4□□□□□ -0.58
PALB2-205ENST00000567003 IFITM5A6NNB3 132 aa11.4□□□□□ -0.58
PALB2-205ENST00000567003 TGOLN2O43493 480 aa11.4□□□□□ -0.58
PALB2-205ENST00000567003 RAB6AP20340 208 aa11.4□□□□□ -0.58
PALB2-205ENST00000567003 DTYMKP23919 212 aa11.4□□□□□ -0.58
PALB2-205ENST00000567003 PSMA1P25786 263 aaKnown RBP11.4□□□□□ -0.58
PALB2-205ENST00000567003 ELLP55199 621 aaPredicted RBP11.4□□□□□ -0.58
PALB2-205ENST00000567003 MLLT11Q13015 90 aaPredicted RBP11.4□□□□□ -0.58
PALB2-205ENST00000567003 TIMM50Q3ZCQ8 353 aa11.4□□□□□ -0.58
PALB2-205ENST00000567003 CDNFQ49AH0 187 aa11.4□□□□□ -0.58
PALB2-205ENST00000567003 MAP6D1Q9H9H5 199 aa11.4□□□□□ -0.58
PALB2-205ENST00000567003 HRASLSQ9HDD0 168 aa11.4□□□□□ -0.58
PALB2-205ENST00000567003 PKD1P98161 4303 aa11.4□□□□□ -0.58
PALB2-205ENST00000567003 OR10W1Q8NGF6 305 aa11.39□□□□□ -0.59
PALB2-205ENST00000567003 CD300LFQ8TDQ1 290 aa11.39□□□□□ -0.59
PALB2-205ENST00000567003 C20orf24Q9BUV8 137 aa11.39□□□□□ -0.59
PALB2-205ENST00000567003 CCDC90BQ9GZT6 254 aa11.39□□□□□ -0.59
PALB2-205ENST00000567003 TMEM235A6NFC5 223 aa11.38□□□□□ -0.59
PALB2-205ENST00000567003 DEFB4AO15263 64 aa11.38□□□□□ -0.59
PALB2-205ENST00000567003 SLC22A5O76082 557 aa11.38□□□□□ -0.59
PALB2-205ENST00000567003 HRASP01112 189 aa11.38□□□□□ -0.59
PALB2-205ENST00000567003 CTSDP07339 412 aaPredicted RBP11.38□□□□□ -0.59
PALB2-205ENST00000567003 PTHLHP12272 177 aa11.38□□□□□ -0.59
PALB2-205ENST00000567003 SSX1Q16384 188 aa11.38□□□□□ -0.59
PALB2-205ENST00000567003 NR2C2APQ86WQ0 139 aa11.38□□□□□ -0.59
PALB2-205ENST00000567003 GALNT14Q96FL9 552 aa11.38□□□□□ -0.59
PALB2-205ENST00000567003 MGLLQ99685 303 aa11.38□□□□□ -0.59
PALB2-205ENST00000567003 CHRDL1Q9BU40 450 aa11.38□□□□□ -0.59
PALB2-205ENST00000567003 DAZ1Q9NQZ3 744 aaKnown RBP11.38□□□□□ -0.59
PALB2-205ENST00000567003 CCL28Q9NRJ3 127 aa11.38□□□□□ -0.59
PALB2-205ENST00000567003 BET1LQ9NYM9 111 aa11.38□□□□□ -0.59
PALB2-205ENST00000567003 METTL21EPA6NDL7 271 aa11.37□□□□□ -0.59
PALB2-205ENST00000567003 OR4C46A6NHA9 309 aa11.37□□□□□ -0.59
PALB2-205ENST00000567003 PDCD5O14737 125 aa11.37□□□□□ -0.59
PALB2-205ENST00000567003 RGS10O43665 173 aa11.37□□□□□ -0.59
PALB2-205ENST00000567003 SSX5O60225 188 aa11.37□□□□□ -0.59
PALB2-205ENST00000567003 CTXN2P0C2S0 81 aa11.37□□□□□ -0.59
PALB2-205ENST00000567003 PTBP1P26599 531 aaKnown RBP eCLIP11.37□□□□□ -0.59
PALB2-205ENST00000567003 TFPI2P48307 235 aa11.37□□□□□ -0.59
PALB2-205ENST00000567003 RBMS2Q15434 407 aaKnown RBP11.37□□□□□ -0.59
PALB2-205ENST00000567003 HACD4Q5VWC8 232 aa11.37□□□□□ -0.59
PALB2-205ENST00000567003 LAMTOR1Q6IAA8 161 aa11.37□□□□□ -0.59
PALB2-205ENST00000567003 CNIH2Q6PI25 160 aa11.37□□□□□ -0.59
PALB2-205ENST00000567003 ZNF66Q6ZN08 573 aa11.37□□□□□ -0.59
PALB2-205ENST00000567003 SPAG16Q8N0X2 631 aa11.37□□□□□ -0.59
PALB2-205ENST00000567003 SECTM1Q8WVN6 248 aa11.37□□□□□ -0.59
PALB2-205ENST00000567003 CENPOQ9BU64 300 aa11.37□□□□□ -0.59
PALB2-205ENST00000567003 DUSP21Q9H596 190 aa11.37□□□□□ -0.59
PALB2-205ENST00000567003 ACOT13Q9NPJ3 140 aa11.37□□□□□ -0.59
PALB2-205ENST00000567003 TRAV1-2A0A0B4J238 106 aa11.36□□□□□ -0.59
PALB2-205ENST00000567003 SULT1C2O00338 296 aa11.36□□□□□ -0.59
PALB2-205ENST00000567003 UPK2O00526 184 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms