RNA–Protein interactions for RNA: ENST00000566779.1

GTF3C1-206, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-206ENST00000566779 HRH1P35367 487 aa7.75□□□□□ -1.17
GTF3C1-206ENST00000566779 TAS2R46P59540 309 aa7.75□□□□□ -1.17
GTF3C1-206ENST00000566779 ERVK-16P61578 105 aa7.75□□□□□ -1.17
GTF3C1-206ENST00000566779 TSPAN5P62079 268 aa7.75□□□□□ -1.17
GTF3C1-206ENST00000566779 RPL8P62917 257 aaKnown RBP7.75□□□□□ -1.17
GTF3C1-206ENST00000566779 ZNF45Q02386 682 aa7.75□□□□□ -1.17
GTF3C1-206ENST00000566779 C15orf32Q32M92 178 aa7.75□□□□□ -1.17
GTF3C1-206ENST00000566779 PHLDA2Q53GA4 152 aa7.75□□□□□ -1.17
GTF3C1-206ENST00000566779 GPR107Q5VW38 600 aa7.75□□□□□ -1.17
GTF3C1-206ENST00000566779 OR4A47Q6IF82 309 aa7.75□□□□□ -1.17
GTF3C1-206ENST00000566779 TMEM167AQ8TBQ9 72 aa7.75□□□□□ -1.17
GTF3C1-206ENST00000566779 HINT2Q9BX68 163 aa7.75□□□□□ -1.17
GTF3C1-206ENST00000566779 FXYD6Q9H0Q3 95 aa7.75□□□□□ -1.17
GTF3C1-206ENST00000566779 LSM4Q9Y4Z0 139 aaKnown RBP7.75□□□□□ -1.17
GTF3C1-206ENST00000566779 FAM223BA6NKX1 122 aa7.74□□□□□ -1.17
GTF3C1-206ENST00000566779 TEX22C9J3V5 150 aa7.74□□□□□ -1.17
GTF3C1-206ENST00000566779 HLA-AP01891 365 aaKnown RBP7.74□□□□□ -1.17
GTF3C1-206ENST00000566779 SMIM18P0DKX4 95 aa7.74□□□□□ -1.17
GTF3C1-206ENST00000566779 HLA-GP17693 338 aa7.74□□□□□ -1.17
GTF3C1-206ENST00000566779 BRWD1-AS2P59051 145 aa7.74□□□□□ -1.17
GTF3C1-206ENST00000566779 EIF4EBP1Q13541 118 aaPredicted RBP7.74□□□□□ -1.17
GTF3C1-206ENST00000566779 SLC25A42Q86VD7 318 aa7.74□□□□□ -1.17
GTF3C1-206ENST00000566779 FAM223AQ8IWN6 122 aa7.74□□□□□ -1.17
GTF3C1-206ENST00000566779 PUSL1Q8N0Z8 303 aaKnown RBP7.74□□□□□ -1.17
GTF3C1-206ENST00000566779 ZBTB34Q8NCN2 500 aa7.74□□□□□ -1.17
GTF3C1-206ENST00000566779 OR9G4Q8NGQ1 327 aa7.74□□□□□ -1.17
GTF3C1-206ENST00000566779 DYNLRB2Q8TF09 96 aa7.74□□□□□ -1.17
GTF3C1-206ENST00000566779 USMG5Q96IX5 58 aa7.74□□□□□ -1.17
GTF3C1-206ENST00000566779 ZC4H2Q9NQZ6 224 aa7.74□□□□□ -1.17
GTF3C1-206ENST00000566779 TMEM140Q9NV12 185 aa7.74□□□□□ -1.17
GTF3C1-206ENST00000566779 U3KQK5 164 aa7.74□□□□□ -1.17
GTF3C1-206ENST00000566779 TRAV3A0A0B4J244 114 aa7.73□□□□□ -1.17
GTF3C1-206ENST00000566779 M0QYG6 137 aa7.73□□□□□ -1.17
GTF3C1-206ENST00000566779 BMPR1BO00238 502 aa7.73□□□□□ -1.17
GTF3C1-206ENST00000566779 TMEM127O75204 238 aa7.73□□□□□ -1.17
GTF3C1-206ENST00000566779 IL6RP08887 468 aaPredicted RBP7.73□□□□□ -1.17
GTF3C1-206ENST00000566779 NQO2P16083 231 aa7.73□□□□□ -1.17
GTF3C1-206ENST00000566779 ELK1P19419 428 aa7.73□□□□□ -1.17
GTF3C1-206ENST00000566779 RORCP51449 518 aa7.73□□□□□ -1.17
GTF3C1-206ENST00000566779 TATDN3Q17R31 274 aa7.73□□□□□ -1.17
GTF3C1-206ENST00000566779 ZNF343Q6P1L6 599 aa7.73□□□□□ -1.17
GTF3C1-206ENST00000566779 MZT2AQ6P582 158 aa7.73□□□□□ -1.17
GTF3C1-206ENST00000566779 WFDC3Q8IUB2 231 aa7.73□□□□□ -1.17
GTF3C1-206ENST00000566779 TTC9CQ8N5M4 171 aa7.73□□□□□ -1.17
GTF3C1-206ENST00000566779 NECAP1Q8NC96 275 aa7.73□□□□□ -1.17
GTF3C1-206ENST00000566779 GIMAP1Q8WWP7 306 aa7.73□□□□□ -1.17
GTF3C1-206ENST00000566779 MOB3AQ96BX8 217 aa7.73□□□□□ -1.17
GTF3C1-206ENST00000566779 COMMD5Q9GZQ3 224 aa7.73□□□□□ -1.17
GTF3C1-206ENST00000566779 ZMAT4Q9H898 229 aa7.73□□□□□ -1.17
GTF3C1-206ENST00000566779 EXTL2Q9UBQ6 330 aa7.73□□□□□ -1.17
GTF3C1-206ENST00000566779 ZNF257Q9Y2Q1 563 aa7.73□□□□□ -1.17
GTF3C1-206ENST00000566779 DNAH3Q8TD57 4116 aa7.72□□□□□ -1.17
GTF3C1-206ENST00000566779 A0A1B0GW64 132 aa7.72□□□□□ -1.17
GTF3C1-206ENST00000566779 E7EUB6 86 aa7.72□□□□□ -1.17
GTF3C1-206ENST00000566779 GPR31O00270 319 aa7.72□□□□□ -1.17
GTF3C1-206ENST00000566779 RGS5O15539 181 aa7.72□□□□□ -1.17
GTF3C1-206ENST00000566779 NDUFB8O95169 186 aa7.72□□□□□ -1.17
GTF3C1-206ENST00000566779 DHFRP00374 187 aa7.72□□□□□ -1.17
GTF3C1-206ENST00000566779 HPRT1P00492 218 aa7.72□□□□□ -1.17
GTF3C1-206ENST00000566779 APOA1P02647 267 aa7.72□□□□□ -1.17
GTF3C1-206ENST00000566779 FRMD6-AS1P0C7T7 363 aa7.72□□□□□ -1.17
GTF3C1-206ENST00000566779 PGAM2P15259 253 aa7.72□□□□□ -1.17
GTF3C1-206ENST00000566779 PSMB6P28072 239 aa7.72□□□□□ -1.17
GTF3C1-206ENST00000566779 GNRHRP30968 328 aa7.72□□□□□ -1.17
GTF3C1-206ENST00000566779 MAS1LP35410 378 aa7.72□□□□□ -1.17
GTF3C1-206ENST00000566779 G6PCP35575 357 aa7.72□□□□□ -1.17
GTF3C1-206ENST00000566779 ARL3P36405 182 aa7.72□□□□□ -1.17
GTF3C1-206ENST00000566779 LPAR6P43657 344 aa7.72□□□□□ -1.17
GTF3C1-206ENST00000566779 TAS2R31P59538 309 aa7.72□□□□□ -1.17
GTF3C1-206ENST00000566779 OR2B8PP59922 312 aa7.72□□□□□ -1.17
GTF3C1-206ENST00000566779 KIR3DS1Q14943 382 aa7.72□□□□□ -1.17
GTF3C1-206ENST00000566779 MSMO1Q15800 293 aa7.72□□□□□ -1.17
GTF3C1-206ENST00000566779 CLEC19AQ6UXS0 136 aa7.72□□□□□ -1.17
GTF3C1-206ENST00000566779 GPR141Q7Z602 305 aa7.72□□□□□ -1.17
GTF3C1-206ENST00000566779 SGPP2Q8IWX5 399 aa7.72□□□□□ -1.17
GTF3C1-206ENST00000566779 CMTM1Q8IZ96 169 aa7.72□□□□□ -1.17
GTF3C1-206ENST00000566779 OR6F1Q8NGZ6 308 aa7.72□□□□□ -1.17
GTF3C1-206ENST00000566779 AP3S1Q92572 193 aa7.72□□□□□ -1.17
GTF3C1-206ENST00000566779 BORCS5Q969J3 196 aa7.72□□□□□ -1.17
GTF3C1-206ENST00000566779 AIFM2Q9BRQ8 373 aa7.72□□□□□ -1.17
GTF3C1-206ENST00000566779 MRPS26Q9BYN8 205 aaKnown RBP7.72□□□□□ -1.17
GTF3C1-206ENST00000566779 SLC2A9Q9NRM0 540 aa7.72□□□□□ -1.17
GTF3C1-206ENST00000566779 PEMTQ9UBM1 199 aa7.72□□□□□ -1.17
GTF3C1-206ENST00000566779 NSG2Q9Y328 171 aa7.72□□□□□ -1.17
GTF3C1-206ENST00000566779 COL7A1Q02388 2944 aa7.72□□□□□ -1.17
GTF3C1-206ENST00000566779 IGHV3-21A0A0B4J1V1 117 aa7.71□□□□□ -1.18
GTF3C1-206ENST00000566779 IGHV3-35A0A0C4DH35 117 aa7.71□□□□□ -1.18
GTF3C1-206ENST00000566779 ZNF320A2RRD8 509 aa7.71□□□□□ -1.18
GTF3C1-206ENST00000566779 MARCH11A6NNE9 402 aa7.71□□□□□ -1.18
GTF3C1-206ENST00000566779 NPIPB5A8MRT5 1133 aa7.71□□□□□ -1.18
GTF3C1-206ENST00000566779 UPK2O00526 184 aa7.71□□□□□ -1.18
GTF3C1-206ENST00000566779 RBFOX2O43251 390 aaKnown RBP eCLIP7.71□□□□□ -1.18
GTF3C1-206ENST00000566779 PGLYRP1O75594 196 aaPredicted RBP7.71□□□□□ -1.18
GTF3C1-206ENST00000566779 GABARAPO95166 117 aa7.71□□□□□ -1.18
GTF3C1-206ENST00000566779 KRASP01116 189 aa7.71□□□□□ -1.18
GTF3C1-206ENST00000566779 IGLV1-51P01701 117 aa7.71□□□□□ -1.18
GTF3C1-206ENST00000566779 ZNF735P0CB33 412 aa7.71□□□□□ -1.18
GTF3C1-206ENST00000566779 EDN2P20800 178 aa7.71□□□□□ -1.18
GTF3C1-206ENST00000566779 S100GP29377 79 aa7.71□□□□□ -1.18
GTF3C1-206ENST00000566779 RCVRNP35243 200 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms