RNA–Protein interactions for RNA: ENST00000565810.1

CDH1-208, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-208ENST00000565810 IAH1Q2TAA2 248 aaPredicted RBP6.18□□□□□ -1.42
CDH1-208ENST00000565810 SLC35E3Q7Z769 313 aa6.18□□□□□ -1.42
CDH1-208ENST00000565810 ZNF429Q86V71 674 aa6.18□□□□□ -1.42
CDH1-208ENST00000565810 FOXRED2Q8IWF2 684 aa6.18□□□□□ -1.42
CDH1-208ENST00000565810 MRPL41Q8IXM3 137 aaKnown RBP6.18□□□□□ -1.42
CDH1-208ENST00000565810 OR5M8Q8NGP6 311 aa6.18□□□□□ -1.42
CDH1-208ENST00000565810 OR5B3Q8NH48 314 aa6.18□□□□□ -1.42
CDH1-208ENST00000565810 ARPC1AQ92747 370 aa6.18□□□□□ -1.42
CDH1-208ENST00000565810 C2orf50Q96LR7 162 aa6.18□□□□□ -1.42
CDH1-208ENST00000565810 FYTTD1Q96QD9 318 aaKnown RBP6.18□□□□□ -1.42
CDH1-208ENST00000565810 HINT2Q9BX68 163 aa6.18□□□□□ -1.42
CDH1-208ENST00000565810 QTRT1Q9BXR0 403 aaKnown RBP6.18□□□□□ -1.42
CDH1-208ENST00000565810 ENY2Q9NPA8 101 aa6.18□□□□□ -1.42
CDH1-208ENST00000565810 TPSG1Q9NRR2 321 aa6.18□□□□□ -1.42
CDH1-208ENST00000565810 ZFP57Q9NU63 452 aa6.18□□□□□ -1.42
CDH1-208ENST00000565810 GSKIPQ9P0R6 139 aa6.18□□□□□ -1.42
CDH1-208ENST00000565810 FOXA2Q9Y261 457 aaPredicted RBP6.18□□□□□ -1.42
CDH1-208ENST00000565810 MAST4O15021 2626 aa6.18□□□□□ -1.42
CDH1-208ENST00000565810 IGHV7-81A0A0B4J1V7 117 aa6.17□□□□□ -1.42
CDH1-208ENST00000565810 TEX50A0A1B0GTY4 177 aa6.17□□□□□ -1.42
CDH1-208ENST00000565810 A0A1W2PN81 502 aa6.17□□□□□ -1.42
CDH1-208ENST00000565810 SH2D7A6NKC9 451 aaPredicted RBP6.17□□□□□ -1.42
CDH1-208ENST00000565810 CEBPZOSA8MTT3 80 aa6.17□□□□□ -1.42
CDH1-208ENST00000565810 FAM90A26D6RGX4 464 aa6.17□□□□□ -1.42
CDH1-208ENST00000565810 WRBO00258 174 aa6.17□□□□□ -1.42
CDH1-208ENST00000565810 CCSO14618 274 aa6.17□□□□□ -1.42
CDH1-208ENST00000565810 ST8SIA3O43173 380 aa6.17□□□□□ -1.42
CDH1-208ENST00000565810 MED6O75586 246 aa6.17□□□□□ -1.42
CDH1-208ENST00000565810 IGHG2P01859 326 aa6.17□□□□□ -1.42
CDH1-208ENST00000565810 OPN1MWP04001 364 aa6.17□□□□□ -1.42
CDH1-208ENST00000565810 AMY1AP04745 511 aa6.17□□□□□ -1.42
CDH1-208ENST00000565810 TRAPPC2P0DI81 140 aa6.17□□□□□ -1.42
CDH1-208ENST00000565810 TRAPPC2BP0DI82 140 aa6.17□□□□□ -1.42
CDH1-208ENST00000565810 OPN1MW2P0DN77 364 aa6.17□□□□□ -1.42
CDH1-208ENST00000565810 OPN1MW3P0DN78 364 aa6.17□□□□□ -1.42
CDH1-208ENST00000565810 CHRNA7P36544 502 aa6.17□□□□□ -1.42
CDH1-208ENST00000565810 NKX2-1P43699 371 aaPredicted RBP6.17□□□□□ -1.42
CDH1-208ENST00000565810 VDAC2P45880 294 aaPredicted RBP6.17□□□□□ -1.42
CDH1-208ENST00000565810 COMPP49747 757 aaPredicted RBP6.17□□□□□ -1.42
CDH1-208ENST00000565810 SPCS3P61009 180 aa6.17□□□□□ -1.42
CDH1-208ENST00000565810 RRAS2P62070 204 aaPredicted RBP6.17□□□□□ -1.42
CDH1-208ENST00000565810 ERHP84090 104 aaKnown RBP6.17□□□□□ -1.42
CDH1-208ENST00000565810 FCN2Q15485 313 aa6.17□□□□□ -1.42
CDH1-208ENST00000565810 Q6ZRM9 215 aa6.17□□□□□ -1.42
CDH1-208ENST00000565810 HSD17B13Q7Z5P4 300 aaPredicted RBP6.17□□□□□ -1.42
CDH1-208ENST00000565810 ZBTB8BQ8NAP8 495 aaPredicted RBP6.17□□□□□ -1.42
CDH1-208ENST00000565810 OR52E5Q8NH55 327 aa6.17□□□□□ -1.42
CDH1-208ENST00000565810 OR2T6Q8NHC8 308 aa6.17□□□□□ -1.42
CDH1-208ENST00000565810 GRPEL2Q8TAA5 225 aa6.17□□□□□ -1.42
CDH1-208ENST00000565810 SRSF12Q8WXF0 261 aaKnown RBP6.17□□□□□ -1.42
CDH1-208ENST00000565810 OR10C1Q96KK4 312 aa6.17□□□□□ -1.42
CDH1-208ENST00000565810 TMEM68Q96MH6 324 aa6.17□□□□□ -1.42
CDH1-208ENST00000565810 GON7Q9BXV9 100 aa6.17□□□□□ -1.42
CDH1-208ENST00000565810 PLEKHA3Q9HB20 300 aa6.17□□□□□ -1.42
CDH1-208ENST00000565810 PARP11Q9NR21 331 aa6.17□□□□□ -1.42
CDH1-208ENST00000565810 TMEM14BQ9NUH8 114 aa6.17□□□□□ -1.42
CDH1-208ENST00000565810 ZNF257Q9Y2Q1 563 aa6.17□□□□□ -1.42
CDH1-208ENST00000565810 MSGN1A6NI15 193 aa6.16□□□□□ -1.42
CDH1-208ENST00000565810 MPTX1A8MV57 137 aa6.16□□□□□ -1.42
CDH1-208ENST00000565810 AP4M1O00189 453 aa6.16□□□□□ -1.42
CDH1-208ENST00000565810 PITX3O75364 302 aa6.16□□□□□ -1.42
CDH1-208ENST00000565810 TSPAN9O75954 239 aa6.16□□□□□ -1.42
CDH1-208ENST00000565810 LY86O95711 162 aa6.16□□□□□ -1.42
CDH1-208ENST00000565810 SCGB1D2O95969 90 aa6.16□□□□□ -1.42
CDH1-208ENST00000565810 RLN2P04090 185 aa6.16□□□□□ -1.42
CDH1-208ENST00000565810 HOXA1P49639 335 aaPredicted RBP6.16□□□□□ -1.42
CDH1-208ENST00000565810 PRCDQ00LT1 54 aa6.16□□□□□ -1.42
CDH1-208ENST00000565810 TNFRSF9Q07011 255 aa6.16□□□□□ -1.42
CDH1-208ENST00000565810 Q6ZSV7 163 aa6.16□□□□□ -1.42
CDH1-208ENST00000565810 OR4F5Q8NH21 305 aa6.16□□□□□ -1.42
CDH1-208ENST00000565810 SGMS2Q8NHU3 365 aa6.16□□□□□ -1.42
CDH1-208ENST00000565810 ASB13Q8WXK3 278 aa6.16□□□□□ -1.42
CDH1-208ENST00000565810 HSPB9Q9BQS6 159 aa6.16□□□□□ -1.42
CDH1-208ENST00000565810 SRSF8Q9BRL6 282 aaKnown RBP6.16□□□□□ -1.42
CDH1-208ENST00000565810 FAM103A1Q9BTL3 118 aaKnown RBP6.16□□□□□ -1.42
CDH1-208ENST00000565810 NMES1Q9C002 83 aa6.16□□□□□ -1.42
CDH1-208ENST00000565810 HIPK2Q9H2X6 1198 aa6.16□□□□□ -1.42
CDH1-208ENST00000565810 ZNF702PQ9H963 129 aa6.16□□□□□ -1.42
CDH1-208ENST00000565810 NDUFA4L2Q9NRX3 87 aa6.16□□□□□ -1.42
CDH1-208ENST00000565810 FN1P02751 2386 aaKnown RBP6.16□□□□□ -1.42
CDH1-208ENST00000565810 MTORP42345 2549 aa6.15□□□□□ -1.42
CDH1-208ENST00000565810 hCG_2014768A0A024R1R8 64 aa6.15□□□□□ -1.42
CDH1-208ENST00000565810 HMX3A6NHT5 357 aa6.15□□□□□ -1.42
CDH1-208ENST00000565810 ATP6V0E1O15342 81 aa6.15□□□□□ -1.42
CDH1-208ENST00000565810 CYB5BO43169 146 aa6.15□□□□□ -1.42
CDH1-208ENST00000565810 NXPH3O95157 252 aa6.15□□□□□ -1.42
CDH1-208ENST00000565810 NDUFA7O95182 113 aa6.15□□□□□ -1.42
CDH1-208ENST00000565810 SIX6O95475 246 aa6.15□□□□□ -1.42
CDH1-208ENST00000565810 IGF1P05019 195 aa6.15□□□□□ -1.42
CDH1-208ENST00000565810 MYOD1P15172 320 aa6.15□□□□□ -1.42
CDH1-208ENST00000565810 PVALBP20472 110 aaPredicted RBP6.15□□□□□ -1.42
CDH1-208ENST00000565810 SNCAP37840 140 aa6.15□□□□□ -1.42
CDH1-208ENST00000565810 SUB1P53999 127 aaKnown RBP eCLIP6.15□□□□□ -1.42
CDH1-208ENST00000565810 RPP30P78346 268 aaKnown RBP6.15□□□□□ -1.42
CDH1-208ENST00000565810 SLC35B1P78383 322 aa6.15□□□□□ -1.42
CDH1-208ENST00000565810 ID3Q02535 119 aa6.15□□□□□ -1.42
CDH1-208ENST00000565810 ECSCRQ19T08 205 aa6.15□□□□□ -1.42
CDH1-208ENST00000565810 MRGPRG-AS1Q2M3A8 158 aa6.15□□□□□ -1.42
CDH1-208ENST00000565810 C2orf68Q2NKX9 166 aa6.15□□□□□ -1.42
CDH1-208ENST00000565810 AARDQ4LEZ3 155 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms