RNA–Protein interactions for RNA: ENST00000565379.1

NME3-208, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 911 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-208ENST00000565379 ARPC1AQ92747 370 aa20.43■□□□□ 0.86
NME3-208ENST00000565379 FKBP11Q9NYL4 201 aa20.43■□□□□ 0.86
NME3-208ENST00000565379 PRNDQ9UKY0 176 aa20.43■□□□□ 0.86
NME3-208ENST00000565379 A0A0B4J2A0 478 aa20.42■□□□□ 0.86
NME3-208ENST00000565379 GNB1P62873 340 aa20.42■□□□□ 0.86
NME3-208ENST00000565379 PJVKQ0ZLH3 352 aa20.42■□□□□ 0.86
NME3-208ENST00000565379 DHRS2Q13268 280 aa20.42■□□□□ 0.86
NME3-208ENST00000565379 TNXAQ16473 311 aa20.42■□□□□ 0.86
NME3-208ENST00000565379 MRGPRG-AS1Q2M3A8 158 aa20.42■□□□□ 0.86
NME3-208ENST00000565379 COQ8AQ8NI60 647 aa20.42■□□□□ 0.86
NME3-208ENST00000565379 RNASE11Q8TAA1 199 aaKnown RBP20.42■□□□□ 0.86
NME3-208ENST00000565379 LSM10Q969L4 123 aaKnown RBP20.42■□□□□ 0.86
NME3-208ENST00000565379 TMEM68Q96MH6 324 aa20.42■□□□□ 0.86
NME3-208ENST00000565379 WNT10AQ9GZT5 417 aa20.42■□□□□ 0.86
NME3-208ENST00000565379 SHPKQ9UHJ6 478 aa20.42■□□□□ 0.86
NME3-208ENST00000565379 DUS4LO95620 317 aaKnown RBP20.41■□□□□ 0.86
NME3-208ENST00000565379 HLA-GP17693 338 aa20.41■□□□□ 0.86
NME3-208ENST00000565379 VDAC1P21796 283 aa20.41■□□□□ 0.86
NME3-208ENST00000565379 STPG2Q8N412 459 aa20.41■□□□□ 0.86
NME3-208ENST00000565379 CASTOR1Q8WTX7 329 aa20.41■□□□□ 0.86
NME3-208ENST00000565379 PARP11Q9NR21 331 aa20.41■□□□□ 0.86
NME3-208ENST00000565379 M0QZ24 198 aa20.4■□□□□ 0.86
NME3-208ENST00000565379 ATP6V0E1O15342 81 aa20.4■□□□□ 0.86
NME3-208ENST00000565379 IGKV1-5P01602 117 aa20.4■□□□□ 0.86
NME3-208ENST00000565379 IL5P05113 134 aa20.4■□□□□ 0.86
NME3-208ENST00000565379 SLC35B1P78383 322 aa20.4■□□□□ 0.86
NME3-208ENST00000565379 C11orf44Q8N8P7 122 aa20.4■□□□□ 0.86
NME3-208ENST00000565379 OR4A16Q8NH70 328 aa20.4■□□□□ 0.86
NME3-208ENST00000565379 LHFPL5Q8TAF8 219 aa20.4■□□□□ 0.86
NME3-208ENST00000565379 ABHD5Q8WTS1 349 aa20.4■□□□□ 0.86
NME3-208ENST00000565379 MARVELD1Q9BSK0 173 aa20.4■□□□□ 0.86
NME3-208ENST00000565379 COMMD5Q9GZQ3 224 aa20.4■□□□□ 0.86
NME3-208ENST00000565379 CACFD1Q9UGQ2 172 aa20.4■□□□□ 0.86
NME3-208ENST00000565379 LINC01548A6NM66 108 aa20.39■□□□□ 0.85
NME3-208ENST00000565379 PRAF2O60831 178 aa20.39■□□□□ 0.85
NME3-208ENST00000565379 P0C879 139 aa20.39■□□□□ 0.85
NME3-208ENST00000565379 THOC7Q6I9Y2 204 aaKnown RBP20.39■□□□□ 0.85
NME3-208ENST00000565379 SPIN2AQ99865 258 aa20.39■□□□□ 0.85
NME3-208ENST00000565379 SPIN2BQ9BPZ2 258 aa20.39■□□□□ 0.85
NME3-208ENST00000565379 INMT-MINDY4F8WBC2 141 aa20.38■□□□□ 0.85
NME3-208ENST00000565379 DHFRP00374 187 aa20.38■□□□□ 0.85
NME3-208ENST00000565379 SSBP2P81877 361 aaPredicted RBP20.38■□□□□ 0.85
NME3-208ENST00000565379 NDPQ00604 133 aa20.38■□□□□ 0.85
NME3-208ENST00000565379 RGS21Q2M5E4 152 aa20.38■□□□□ 0.85
NME3-208ENST00000565379 TMEM95Q3KNT9 176 aa20.38■□□□□ 0.85
NME3-208ENST00000565379 ANKRD55Q3KP44 614 aa20.38■□□□□ 0.85
NME3-208ENST00000565379 AKIRIN2Q53H80 203 aa20.38■□□□□ 0.85
NME3-208ENST00000565379 CENPVQ7Z7K6 275 aaPredicted RBP20.38■□□□□ 0.85
NME3-208ENST00000565379 SLC35G3Q8N808 338 aa20.38■□□□□ 0.85
NME3-208ENST00000565379 OR5B3Q8NH48 314 aa20.38■□□□□ 0.85
NME3-208ENST00000565379 SRSF12Q8WXF0 261 aaKnown RBP20.38■□□□□ 0.85
NME3-208ENST00000565379 PHB2Q99623 299 aa20.38■□□□□ 0.85
NME3-208ENST00000565379 TRAV41A0A0B4J266 112 aa20.37■□□□□ 0.85
NME3-208ENST00000565379 C15orf61A6NNL5 157 aa20.37■□□□□ 0.85
NME3-208ENST00000565379 OR9G9P0C7N8 305 aa20.37■□□□□ 0.85
NME3-208ENST00000565379 RPL27AP46776 148 aaKnown RBP20.37■□□□□ 0.85
NME3-208ENST00000565379 ZNF429Q86V71 674 aa20.37■□□□□ 0.85
NME3-208ENST00000565379 COMMD1Q8N668 190 aa20.37■□□□□ 0.85
NME3-208ENST00000565379 KLHDC1Q8N7A1 406 aa20.37■□□□□ 0.85
NME3-208ENST00000565379 GRPEL2Q8TAA5 225 aa20.37■□□□□ 0.85
NME3-208ENST00000565379 MITD1Q8WV92 249 aa20.37■□□□□ 0.85
NME3-208ENST00000565379 SRSF8Q9BRL6 282 aaKnown RBP20.37■□□□□ 0.85
NME3-208ENST00000565379 GPN1Q9HCN4 374 aaPredicted RBP20.37■□□□□ 0.85
NME3-208ENST00000565379 TMEM14BQ9NUH8 114 aa20.37■□□□□ 0.85
NME3-208ENST00000565379 FOXA2Q9Y261 457 aaPredicted RBP20.37■□□□□ 0.85
NME3-208ENST00000565379 ZNF257Q9Y2Q1 563 aa20.37■□□□□ 0.85
NME3-208ENST00000565379 TMED3Q9Y3Q3 217 aa20.37■□□□□ 0.85
NME3-208ENST00000565379 TRAV3A0A0B4J244 114 aa20.36■□□□□ 0.85
NME3-208ENST00000565379 PSMB11A5LHX3 300 aa20.36■□□□□ 0.85
NME3-208ENST00000565379 EGR2P11161 476 aaPredicted RBP20.36■□□□□ 0.85
NME3-208ENST00000565379 OR1L8Q8NGR8 309 aa20.36■□□□□ 0.85
NME3-208ENST00000565379 FAM110DQ8TAY7 271 aaPredicted RBP20.36■□□□□ 0.85
NME3-208ENST00000565379 ZNF431Q8TF32 576 aaPredicted RBP20.36■□□□□ 0.85
NME3-208ENST00000565379 NOL4LQ96MY1 436 aaPredicted RBP20.36■□□□□ 0.85
NME3-208ENST00000565379 RBMXL2O75526 392 aaKnown RBP20.35■□□□□ 0.85
NME3-208ENST00000565379 LYZL2Q7Z4W2 148 aa20.35■□□□□ 0.85
NME3-208ENST00000565379 HSD17B13Q7Z5P4 300 aaPredicted RBP20.35■□□□□ 0.85
NME3-208ENST00000565379 CTNNBIP1Q9NSA3 81 aaPredicted RBP20.35■□□□□ 0.85
NME3-208ENST00000565379 COA4Q9NYJ1 87 aa20.35■□□□□ 0.85
NME3-208ENST00000565379 PRR13Q9NZ81 148 aa20.35■□□□□ 0.85
NME3-208ENST00000565379 OR51B2Q9Y5P1 312 aa20.35■□□□□ 0.85
NME3-208ENST00000565379 TET2Q6N021 2002 aaPredicted RBP20.35■□□□□ 0.85
NME3-208ENST00000565379 MSGN1A6NI15 193 aa20.34■□□□□ 0.85
NME3-208ENST00000565379 SLC25A6P12236 298 aa20.34■□□□□ 0.85
NME3-208ENST00000565379 NMSQ5H8A3 153 aa20.34■□□□□ 0.85
NME3-208ENST00000565379 UNQ5815/PRO19632Q6UWF5 114 aa20.34■□□□□ 0.85
NME3-208ENST00000565379 MRPL41Q8IXM3 137 aaKnown RBP20.34■□□□□ 0.85
NME3-208ENST00000565379 WIPF2Q8TF74 440 aaPredicted RBP20.34■□□□□ 0.85
NME3-208ENST00000565379 GPR146Q96CH1 333 aa20.34■□□□□ 0.85
NME3-208ENST00000565379 FAM103A1Q9BTL3 118 aaKnown RBP20.34■□□□□ 0.85
NME3-208ENST00000565379 QTRT1Q9BXR0 403 aaKnown RBP20.34■□□□□ 0.85
NME3-208ENST00000565379 FBXO7Q9Y3I1 522 aa20.34■□□□□ 0.85
NME3-208ENST00000565379 TNCP24821 2201 aa20.33■□□□□ 0.85
NME3-208ENST00000565379 A0A1B0GU03 582 aa20.33■□□□□ 0.85
NME3-208ENST00000565379 SNRPGP15A8MWD9 76 aa20.33■□□□□ 0.85
NME3-208ENST00000565379 IFNA21P01568 189 aa20.33■□□□□ 0.85
NME3-208ENST00000565379 OR2B8PP59922 312 aa20.33■□□□□ 0.85
NME3-208ENST00000565379 ECSCRQ19T08 205 aa20.33■□□□□ 0.85
NME3-208ENST00000565379 AARDQ4LEZ3 155 aa20.33■□□□□ 0.85
NME3-208ENST00000565379 TEX38Q6PEX7 206 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms