RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 FYTTD1Q96QD9 318 aaKnown RBP6.43□□□□□ -1.38
CAPN3-213ENST00000565173 SRD5A3Q9H8P0 318 aa6.43□□□□□ -1.38
CAPN3-213ENST00000565173 TAS2R8Q9NYW2 309 aa6.43□□□□□ -1.38
CAPN3-213ENST00000565173 S4R3C0 116 aa6.43□□□□□ -1.38
CAPN3-213ENST00000565173 VPS13DQ5THJ4 4388 aa6.42□□□□□ -1.38
CAPN3-213ENST00000565173 IGLV11-55A0A075B6I3 123 aa6.42□□□□□ -1.38
CAPN3-213ENST00000565173 A8MWP6 167 aa6.42□□□□□ -1.38
CAPN3-213ENST00000565173 CLEC3BP05452 202 aa6.42□□□□□ -1.38
CAPN3-213ENST00000565173 C8orf88P0DMB2 117 aa6.42□□□□□ -1.38
CAPN3-213ENST00000565173 ARL3P36405 182 aa6.42□□□□□ -1.38
CAPN3-213ENST00000565173 RPL5P46777 297 aaKnown RBP6.42□□□□□ -1.38
CAPN3-213ENST00000565173 GNG2P59768 71 aa6.42□□□□□ -1.38
CAPN3-213ENST00000565173 NCS1P62166 190 aa6.42□□□□□ -1.38
CAPN3-213ENST00000565173 RPL8P62917 257 aaKnown RBP6.42□□□□□ -1.38
CAPN3-213ENST00000565173 MSMO1Q15800 293 aa6.42□□□□□ -1.38
CAPN3-213ENST00000565173 TM4SF20Q53R12 229 aa6.42□□□□□ -1.38
CAPN3-213ENST00000565173 SFXN4Q6P4A7 337 aa6.42□□□□□ -1.38
CAPN3-213ENST00000565173 UNQ9165/PRO28630Q6UXU0 137 aa6.42□□□□□ -1.38
CAPN3-213ENST00000565173 SSX9Q7RTT3 188 aa6.42□□□□□ -1.38
CAPN3-213ENST00000565173 TMEM61Q8N0U2 210 aa6.42□□□□□ -1.38
CAPN3-213ENST00000565173 GVQW1Q8N7I0 195 aa6.42□□□□□ -1.38
CAPN3-213ENST00000565173 UXS1Q8NBZ7 420 aa6.42□□□□□ -1.38
CAPN3-213ENST00000565173 IL17DQ8TAD2 202 aa6.42□□□□□ -1.38
CAPN3-213ENST00000565173 NAA50Q9GZZ1 169 aaKnown RBP6.42□□□□□ -1.38
CAPN3-213ENST00000565173 CCL28Q9NRJ3 127 aa6.42□□□□□ -1.38
CAPN3-213ENST00000565173 BET1LQ9NYM9 111 aa6.42□□□□□ -1.38
CAPN3-213ENST00000565173 DAPK2Q9UIK4 370 aa6.42□□□□□ -1.38
CAPN3-213ENST00000565173 DNAH10Q8IVF4 4471 aa6.42□□□□□ -1.38
CAPN3-213ENST00000565173 TRBV7-1A0A0A6YYK4 115 aa6.41□□□□□ -1.38
CAPN3-213ENST00000565173 TRAV3A0A0B4J244 114 aa6.41□□□□□ -1.38
CAPN3-213ENST00000565173 IGLC7A0M8Q6 106 aa6.41□□□□□ -1.38
CAPN3-213ENST00000565173 ZNF320A2RRD8 509 aa6.41□□□□□ -1.38
CAPN3-213ENST00000565173 DPPA5A6NC42 116 aa6.41□□□□□ -1.38
CAPN3-213ENST00000565173 MFSD2BA6NFX1 497 aa6.41□□□□□ -1.38
CAPN3-213ENST00000565173 TNFSF12O43508 249 aa6.41□□□□□ -1.38
CAPN3-213ENST00000565173 SCGNO76038 276 aa6.41□□□□□ -1.38
CAPN3-213ENST00000565173 GABARAPO95166 117 aa6.41□□□□□ -1.38
CAPN3-213ENST00000565173 HRASP01112 189 aa6.41□□□□□ -1.38
CAPN3-213ENST00000565173 REG1AP05451 166 aa6.41□□□□□ -1.38
CAPN3-213ENST00000565173 HLA-GP17693 338 aa6.41□□□□□ -1.38
CAPN3-213ENST00000565173 FCGR2CP31995 323 aa6.41□□□□□ -1.38
CAPN3-213ENST00000565173 OR2B8PP59922 312 aa6.41□□□□□ -1.38
CAPN3-213ENST00000565173 VBP1P61758 197 aa6.41□□□□□ -1.38
CAPN3-213ENST00000565173 POU2AF1Q16633 256 aa6.41□□□□□ -1.38
CAPN3-213ENST00000565173 FAM106AQ4KMX7 169 aa6.41□□□□□ -1.38
CAPN3-213ENST00000565173 IDNKQ5T6J7 187 aa6.41□□□□□ -1.38
CAPN3-213ENST00000565173 ZNF57Q68EA5 555 aaPredicted RBP6.41□□□□□ -1.38
CAPN3-213ENST00000565173 OR4A47Q6IF82 309 aa6.41□□□□□ -1.38
CAPN3-213ENST00000565173 CLVS1Q8IUQ0 354 aaPredicted RBP6.41□□□□□ -1.38
CAPN3-213ENST00000565173 BEST4Q8NFU0 473 aa6.41□□□□□ -1.38
CAPN3-213ENST00000565173 OR5H6Q8NGV6 325 aa6.41□□□□□ -1.38
CAPN3-213ENST00000565173 LGALS14Q8TCE9 139 aa6.41□□□□□ -1.38
CAPN3-213ENST00000565173 EEF1AKMT3Q96AZ1 226 aa6.41□□□□□ -1.38
CAPN3-213ENST00000565173 SLC25A38Q96DW6 304 aa6.41□□□□□ -1.38
CAPN3-213ENST00000565173 OVOL2Q9BRP0 275 aa6.41□□□□□ -1.38
CAPN3-213ENST00000565173 RHBDL2Q9NX52 303 aa6.41□□□□□ -1.38
CAPN3-213ENST00000565173 SULT1C2O00338 296 aa6.4□□□□□ -1.38
CAPN3-213ENST00000565173 UPK2O00526 184 aa6.4□□□□□ -1.38
CAPN3-213ENST00000565173 RBFOX2O43251 390 aaKnown RBP eCLIP6.4□□□□□ -1.381e-6■■■■■ 32.4
CAPN3-213ENST00000565173 JTBO76095 146 aa6.4□□□□□ -1.38
CAPN3-213ENST00000565173 SCAF4O95104 1147 aaKnown RBP6.4□□□□□ -1.38
CAPN3-213ENST00000565173 DHFRP00374 187 aa6.4□□□□□ -1.38
CAPN3-213ENST00000565173 HIST1H1BP16401 226 aaKnown RBP6.4□□□□□ -1.38
CAPN3-213ENST00000565173 RPS19P39019 145 aaKnown RBP6.4□□□□□ -1.38
CAPN3-213ENST00000565173 SLC16A13Q7RTY0 426 aa6.4□□□□□ -1.38
CAPN3-213ENST00000565173 HOGA1Q86XE5 327 aa6.4□□□□□ -1.38
CAPN3-213ENST00000565173 SPAG16Q8N0X2 631 aa6.4□□□□□ -1.38
CAPN3-213ENST00000565173 ZBTB34Q8NCN2 500 aa6.4□□□□□ -1.38
CAPN3-213ENST00000565173 OR52B4Q8NGK2 314 aa6.4□□□□□ -1.38
CAPN3-213ENST00000565173 OR4A5Q8NH83 315 aa6.4□□□□□ -1.38
CAPN3-213ENST00000565173 ZNF502Q8TBZ5 544 aa6.4□□□□□ -1.38
CAPN3-213ENST00000565173 SECTM1Q8WVN6 248 aa6.4□□□□□ -1.38
CAPN3-213ENST00000565173 CXorf58Q96LI9 332 aa6.4□□□□□ -1.38
CAPN3-213ENST00000565173 ZNF436Q9C0F3 470 aaPredicted RBP6.4□□□□□ -1.38
CAPN3-213ENST00000565173 TRAV18A0A075B6X5 111 aa6.39□□□□□ -1.39
CAPN3-213ENST00000565173 LOC102724200A0A096LPH7 203 aaPredicted RBP6.39□□□□□ -1.39
CAPN3-213ENST00000565173 NOL3O60936 208 aaKnown RBP6.39□□□□□ -1.39
CAPN3-213ENST00000565173 HPRT1P00492 218 aa6.39□□□□□ -1.39
CAPN3-213ENST00000565173 PPYP01298 95 aa6.39□□□□□ -1.39
CAPN3-213ENST00000565173 FGF2P09038 288 aa6.39□□□□□ -1.39
CAPN3-213ENST00000565173 DEFA4P12838 97 aa6.39□□□□□ -1.39
CAPN3-213ENST00000565173 PTBP1P26599 531 aaKnown RBP eCLIP6.39□□□□□ -1.39
CAPN3-213ENST00000565173 ELLP55199 621 aaPredicted RBP6.39□□□□□ -1.39
CAPN3-213ENST00000565173 SCAND1P57086 179 aa6.39□□□□□ -1.39
CAPN3-213ENST00000565173 TAS2R31P59538 309 aa6.39□□□□□ -1.39
CAPN3-213ENST00000565173 ARPC4P59998 168 aa6.39□□□□□ -1.39
CAPN3-213ENST00000565173 EWSR1Q01844 656 aaKnown RBP eCLIP6.39□□□□□ -1.39
CAPN3-213ENST00000565173 CTF1Q16619 201 aa6.39□□□□□ -1.39
CAPN3-213ENST00000565173 ZNF585BQ52M93 769 aa6.39□□□□□ -1.39
CAPN3-213ENST00000565173 BTNL8Q6UX41 500 aa6.39□□□□□ -1.39
CAPN3-213ENST00000565173 ZNF818PQ6ZRF7 136 aa6.39□□□□□ -1.39
CAPN3-213ENST00000565173 CROCCP3Q8IVE0 287 aa6.39□□□□□ -1.39
CAPN3-213ENST00000565173 OR10W1Q8NGF6 305 aa6.39□□□□□ -1.39
CAPN3-213ENST00000565173 GIMAP1Q8WWP7 306 aa6.39□□□□□ -1.39
CAPN3-213ENST00000565173 SRSF8Q9BRL6 282 aaKnown RBP6.39□□□□□ -1.39
CAPN3-213ENST00000565173 AIFM2Q9BRQ8 373 aa6.39□□□□□ -1.39
CAPN3-213ENST00000565173 GGTLC1Q9BX51 225 aa6.39□□□□□ -1.39
CAPN3-213ENST00000565173 SLC5A7Q9GZV3 580 aa6.39□□□□□ -1.39
CAPN3-213ENST00000565173 HRASLSQ9HDD0 168 aa6.39□□□□□ -1.39
CAPN3-213ENST00000565173 MRPL27Q9P0M9 148 aaKnown RBP6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms