RNA–Protein interactions for RNA: ENST00000563498.1

NME3-204, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2 BASIC

Gene NME3, Length 920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-204ENST00000563498 HLA-GP17693 338 aa13.87□□□□□ -0.19
NME3-204ENST00000563498 CRHBPP24387 322 aa13.87□□□□□ -0.19
NME3-204ENST00000563498 CDNFQ49AH0 187 aa13.87□□□□□ -0.19
NME3-204ENST00000563498 PRSS48Q7RTY5 328 aa13.87□□□□□ -0.19
NME3-204ENST00000563498 KIR2DL5AQ8N109 375 aa13.87□□□□□ -0.19
NME3-204ENST00000563498 TMEM217Q8N7C4 229 aa13.87□□□□□ -0.19
NME3-204ENST00000563498 KIR2DL5BQ8NHK3 375 aa13.87□□□□□ -0.19
NME3-204ENST00000563498 ZNF502Q8TBZ5 544 aa13.87□□□□□ -0.19
NME3-204ENST00000563498 AIFM2Q9BRQ8 373 aa13.87□□□□□ -0.19
NME3-204ENST00000563498 CCDC90BQ9GZT6 254 aa13.87□□□□□ -0.19
NME3-204ENST00000563498 ATG5Q9H1Y0 275 aa13.87□□□□□ -0.19
NME3-204ENST00000563498 BET1LQ9NYM9 111 aa13.87□□□□□ -0.19
NME3-204ENST00000563498 SPATA2Q9UM82 520 aa13.87□□□□□ -0.19
NME3-204ENST00000563498 RAB3BP20337 219 aa13.86□□□□□ -0.19
NME3-204ENST00000563498 MYL9P24844 172 aa13.86□□□□□ -0.19
NME3-204ENST00000563498 GPR183P32249 361 aa13.86□□□□□ -0.19
NME3-204ENST00000563498 DEFB135Q30KP9 77 aa13.86□□□□□ -0.19
NME3-204ENST00000563498 RNF183Q96D59 192 aa13.86□□□□□ -0.19
NME3-204ENST00000563498 ZNF436Q9C0F3 470 aaPredicted RBP13.86□□□□□ -0.19
NME3-204ENST00000563498 TAS2R8Q9NYW2 309 aa13.86□□□□□ -0.19
NME3-204ENST00000563498 CGB1A6NKQ9 187 aa13.85□□□□□ -0.19
NME3-204ENST00000563498 TSPAN4O14817 238 aa13.85□□□□□ -0.19
NME3-204ENST00000563498 REG1AP05451 166 aa13.85□□□□□ -0.19
NME3-204ENST00000563498 PTBP1P26599 531 aaKnown RBP eCLIP13.85□□□□□ -0.19
NME3-204ENST00000563498 OR2B8PP59922 312 aa13.85□□□□□ -0.19
NME3-204ENST00000563498 MSMO1Q15800 293 aa13.85□□□□□ -0.19
NME3-204ENST00000563498 PLET1Q6UQ28 207 aa13.85□□□□□ -0.19
NME3-204ENST00000563498 SSX9Q7RTT3 188 aa13.85□□□□□ -0.19
NME3-204ENST00000563498 RPP25LQ8N5L8 163 aaKnown RBP13.85□□□□□ -0.19
NME3-204ENST00000563498 STPG3Q8N7X2 389 aa13.85□□□□□ -0.19
NME3-204ENST00000563498 SRSF8Q9BRL6 282 aaKnown RBP13.85□□□□□ -0.19
NME3-204ENST00000563498 THYN1Q9P016 225 aa13.85□□□□□ -0.19
NME3-204ENST00000563498 ANXA10Q9UJ72 324 aa13.85□□□□□ -0.19
NME3-204ENST00000563498 HERC2O95714 4834 aa13.85□□□□□ -0.19
NME3-204ENST00000563498 KMT2AQ03164 3969 aa13.84□□□□□ -0.19
NME3-204ENST00000563498 RBFOX2O43251 390 aaKnown RBP eCLIP13.84□□□□□ -0.192e-10■■□□□ 12.7
NME3-204ENST00000563498 TIMM50Q3ZCQ8 353 aa13.84□□□□□ -0.19
NME3-204ENST00000563498 TMEM190Q8WZ59 177 aa13.84□□□□□ -0.19
NME3-204ENST00000563498 TRDV1A0A1B0GX56 115 aa13.83□□□□□ -0.2
NME3-204ENST00000563498 IGLC7A0M8Q6 106 aa13.83□□□□□ -0.2
NME3-204ENST00000563498 SCGNO76038 276 aa13.83□□□□□ -0.2
NME3-204ENST00000563498 FGF2P09038 288 aa13.83□□□□□ -0.2
NME3-204ENST00000563498 TBCEQ15813 527 aaPredicted RBP13.83□□□□□ -0.2
NME3-204ENST00000563498 LGALS9CQ6DKI2 356 aa13.83□□□□□ -0.2
NME3-204ENST00000563498 LAMTOR1Q6IAA8 161 aa13.83□□□□□ -0.2
NME3-204ENST00000563498 ZNF367Q7RTV3 350 aa13.83□□□□□ -0.2
NME3-204ENST00000563498 NR2C2APQ86WQ0 139 aa13.83□□□□□ -0.2
NME3-204ENST00000563498 VN1R17PQ8TDU5 208 aa13.83□□□□□ -0.2
NME3-204ENST00000563498 NUDCD2Q8WVJ2 157 aa13.83□□□□□ -0.2
NME3-204ENST00000563498 HRASLSQ9HDD0 168 aa13.83□□□□□ -0.2
NME3-204ENST00000563498 DAZ1Q9NQZ3 744 aaKnown RBP13.83□□□□□ -0.2
NME3-204ENST00000563498 NDUFB11Q9NX14 153 aa13.83□□□□□ -0.2
NME3-204ENST00000563498 UBQLN2Q9UHD9 624 aa13.83□□□□□ -0.2
NME3-204ENST00000563498 TMEM235A6NFC5 223 aa13.82□□□□□ -0.2
NME3-204ENST00000563498 TGOLN2O43493 480 aa13.82□□□□□ -0.2
NME3-204ENST00000563498 POU2AF1Q16633 256 aa13.82□□□□□ -0.2
NME3-204ENST00000563498 ODF3L2Q3SX64 289 aa13.82□□□□□ -0.2
NME3-204ENST00000563498 IGHV3-35A0A0C4DH35 117 aa13.81□□□□□ -0.2
NME3-204ENST00000563498 CYB5BO43169 146 aa13.81□□□□□ -0.2
NME3-204ENST00000563498 AQP4P55087 323 aa13.81□□□□□ -0.2
NME3-204ENST00000563498 TAS2R31P59538 309 aa13.81□□□□□ -0.2
NME3-204ENST00000563498 GNG2P59768 71 aa13.81□□□□□ -0.2
NME3-204ENST00000563498 SPAG16Q8N0X2 631 aa13.81□□□□□ -0.2
NME3-204ENST00000563498 ZBTB34Q8NCN2 500 aa13.81□□□□□ -0.2
NME3-204ENST00000563498 PHLDA1Q8WV24 401 aaPredicted RBP13.81□□□□□ -0.2
NME3-204ENST00000563498 GALNT14Q96FL9 552 aa13.81□□□□□ -0.2
NME3-204ENST00000563498 GPHA2Q96T91 129 aa13.81□□□□□ -0.2
NME3-204ENST00000563498 ATP6V0BQ99437 205 aa13.81□□□□□ -0.2
NME3-204ENST00000563498 COMMD5Q9GZQ3 224 aa13.81□□□□□ -0.2
NME3-204ENST00000563498 OR4C46A6NHA9 309 aa13.8□□□□□ -0.2
NME3-204ENST00000563498 UPK2O00526 184 aa13.8□□□□□ -0.2
NME3-204ENST00000563498 SSX5O60225 188 aa13.8□□□□□ -0.2
NME3-204ENST00000563498 THOC7Q6I9Y2 204 aaKnown RBP13.8□□□□□ -0.2
NME3-204ENST00000563498 BSCL2Q96G97 398 aaPredicted RBP13.8□□□□□ -0.2
NME3-204ENST00000563498 MAP6D1Q9H9H5 199 aa13.8□□□□□ -0.2
NME3-204ENST00000563498 CCL28Q9NRJ3 127 aa13.8□□□□□ -0.2
NME3-204ENST00000563498 TNFSF12O43508 249 aa13.79□□□□□ -0.2
NME3-204ENST00000563498 DEDDO75618 318 aa13.79□□□□□ -0.2
NME3-204ENST00000563498 HPRT1P00492 218 aa13.79□□□□□ -0.2
NME3-204ENST00000563498 NQO2P16083 231 aa13.79□□□□□ -0.2
NME3-204ENST00000563498 SPSB3Q6PJ21 355 aa13.79□□□□□ -0.2
NME3-204ENST00000563498 HSD17B13Q7Z5P4 300 aaPredicted RBP13.79□□□□□ -0.2
NME3-204ENST00000563498 GDPD1Q8N9F7 314 aa13.79□□□□□ -0.2
NME3-204ENST00000563498 OR13F1Q8NGS4 319 aa13.79□□□□□ -0.2
NME3-204ENST00000563498 SECTM1Q8WVN6 248 aa13.79□□□□□ -0.2
NME3-204ENST00000563498 QTRT1Q9BXR0 403 aaKnown RBP13.79□□□□□ -0.2
NME3-204ENST00000563498 DNAH10Q8IVF4 4471 aa13.79□□□□□ -0.2
NME3-204ENST00000563498 NOTOA8MTQ0 251 aa13.78□□□□□ -0.2
NME3-204ENST00000563498 K7EMT4 169 aa13.78□□□□□ -0.2
NME3-204ENST00000563498 NDUFA4O00483 81 aa13.78□□□□□ -0.2
NME3-204ENST00000563498 FCGR2CP31995 323 aa13.78□□□□□ -0.2
NME3-204ENST00000563498 CATR1Q13166 79 aa13.78□□□□□ -0.2
NME3-204ENST00000563498 C22orf42Q6IC83 251 aa13.78□□□□□ -0.2
NME3-204ENST00000563498 C6orf62Q9GZU0 229 aaPredicted RBP13.78□□□□□ -0.2
NME3-204ENST00000563498 TRAV3A0A0B4J244 114 aa13.77□□□□□ -0.21
NME3-204ENST00000563498 OR2T8A6NH00 312 aa13.77□□□□□ -0.21
NME3-204ENST00000563498 SULT1C2O00338 296 aa13.77□□□□□ -0.21
NME3-204ENST00000563498 S1PR2O95136 353 aa13.77□□□□□ -0.21
NME3-204ENST00000563498 RPA2P15927 270 aa13.77□□□□□ -0.21
NME3-204ENST00000563498 RPL35AP18077 110 aaKnown RBP13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms