RNA–Protein interactions for RNA: ENST00000563366.5

UBFD1-202, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 709 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-202ENST00000563366 TMEM14BQ9NUH8 114 aa7.85□□□□□ -1.15
UBFD1-202ENST00000563366 ZNRD1Q9P1U0 126 aa7.85□□□□□ -1.15
UBFD1-202ENST00000563366 STRAPQ9Y3F4 350 aaKnown RBP7.85□□□□□ -1.15
UBFD1-202ENST00000563366 LRRK2Q5S007 2527 aa7.85□□□□□ -1.15
UBFD1-202ENST00000563366 ARID1AO14497 2285 aa7.84□□□□□ -1.15
UBFD1-202ENST00000563366 IGSF23A1L1A6 192 aa7.84□□□□□ -1.15
UBFD1-202ENST00000563366 FAM24AA6NFZ4 105 aa7.84□□□□□ -1.15
UBFD1-202ENST00000563366 NUDT19A8MXV4 375 aa7.84□□□□□ -1.15
UBFD1-202ENST00000563366 UPK2O00526 184 aa7.84□□□□□ -1.15
UBFD1-202ENST00000563366 KCNAB3O43448 404 aa7.84□□□□□ -1.15
UBFD1-202ENST00000563366 CFDP00746 253 aaPredicted RBP7.84□□□□□ -1.15
UBFD1-202ENST00000563366 SAA1P0DJI8 122 aaPredicted RBP7.84□□□□□ -1.15
UBFD1-202ENST00000563366 IAPPP10997 89 aa7.84□□□□□ -1.15
UBFD1-202ENST00000563366 ZFP36P26651 326 aaKnown RBP7.84□□□□□ -1.15
UBFD1-202ENST00000563366 UBE2E1P51965 193 aa7.84□□□□□ -1.15
UBFD1-202ENST00000563366 PAX9P55771 341 aa7.84□□□□□ -1.15
UBFD1-202ENST00000563366 HSPE1P61604 102 aaKnown RBP7.84□□□□□ -1.15
UBFD1-202ENST00000563366 RPS16P62249 146 aaKnown RBP7.84□□□□□ -1.15
UBFD1-202ENST00000563366 ATP6V1FQ16864 119 aa7.84□□□□□ -1.15
UBFD1-202ENST00000563366 TPTE2P1Q5T6R2 138 aa7.84□□□□□ -1.15
UBFD1-202ENST00000563366 OR5C1Q8NGR4 320 aa7.84□□□□□ -1.15
UBFD1-202ENST00000563366 TMEM167AQ8TBQ9 72 aa7.84□□□□□ -1.15
UBFD1-202ENST00000563366 ATP5SQ99766 215 aa7.84□□□□□ -1.15
UBFD1-202ENST00000563366 SIRPDQ9H106 197 aa7.84□□□□□ -1.15
UBFD1-202ENST00000563366 CYTL1Q9NRR1 136 aa7.84□□□□□ -1.15
UBFD1-202ENST00000563366 CHD6Q8TD26 2715 aa7.83□□□□□ -1.16
UBFD1-202ENST00000563366 B4DSR2 109 aa7.83□□□□□ -1.16
UBFD1-202ENST00000563366 H3BP45 60 aa7.83□□□□□ -1.16
UBFD1-202ENST00000563366 LY6LH3BQJ8 138 aa7.83□□□□□ -1.16
UBFD1-202ENST00000563366 TMEM50AO95807 157 aa7.83□□□□□ -1.16
UBFD1-202ENST00000563366 IFNA5P01569 189 aa7.83□□□□□ -1.16
UBFD1-202ENST00000563366 IL6RP08887 468 aaPredicted RBP7.83□□□□□ -1.16
UBFD1-202ENST00000563366 SEC11BP0C7V7 166 aa7.83□□□□□ -1.16
UBFD1-202ENST00000563366 CD1BP29016 333 aa7.83□□□□□ -1.16
UBFD1-202ENST00000563366 MAS1LP35410 378 aa7.83□□□□□ -1.16
UBFD1-202ENST00000563366 HOXA1P49639 335 aaPredicted RBP7.83□□□□□ -1.16
UBFD1-202ENST00000563366 OR2B8PP59922 312 aa7.83□□□□□ -1.16
UBFD1-202ENST00000563366 RAB11AP62491 216 aa7.83□□□□□ -1.16
UBFD1-202ENST00000563366 RPL8P62917 257 aaKnown RBP7.83□□□□□ -1.16
UBFD1-202ENST00000563366 NHLH2Q02577 135 aa7.83□□□□□ -1.16
UBFD1-202ENST00000563366 HABP2Q14520 560 aaPredicted RBP7.83□□□□□ -1.16
UBFD1-202ENST00000563366 CLEC12BQ2HXU8 276 aa7.83□□□□□ -1.16
UBFD1-202ENST00000563366 SPANXN5Q5MJ07 72 aa7.83□□□□□ -1.16
UBFD1-202ENST00000563366 RPL7L1Q6DKI1 246 aaKnown RBP7.83□□□□□ -1.16
UBFD1-202ENST00000563366 TMEM14EPQ6UXP3 125 aa7.83□□□□□ -1.16
UBFD1-202ENST00000563366 MOB3BQ86TA1 216 aa7.83□□□□□ -1.16
UBFD1-202ENST00000563366 PDZD9Q8IXQ8 264 aa7.83□□□□□ -1.16
UBFD1-202ENST00000563366 VKORC1L1Q8N0U8 176 aa7.83□□□□□ -1.16
UBFD1-202ENST00000563366 TEX45Q8NA69 505 aa7.83□□□□□ -1.16
UBFD1-202ENST00000563366 OR10P1Q8NGE3 313 aa7.83□□□□□ -1.16
UBFD1-202ENST00000563366 GNPNAT1Q96EK6 184 aaPredicted RBP7.83□□□□□ -1.16
UBFD1-202ENST00000563366 QTRT1Q9BXR0 403 aaKnown RBP7.83□□□□□ -1.16
UBFD1-202ENST00000563366 COMMD5Q9GZQ3 224 aa7.83□□□□□ -1.16
UBFD1-202ENST00000563366 PLEKHA3Q9HB20 300 aa7.83□□□□□ -1.16
UBFD1-202ENST00000563366 HEYLQ9NQ87 328 aaPredicted RBP7.83□□□□□ -1.16
UBFD1-202ENST00000563366 TCF19Q9Y242 345 aa7.83□□□□□ -1.16
UBFD1-202ENST00000563366 OR51B2Q9Y5P1 312 aa7.83□□□□□ -1.16
UBFD1-202ENST00000563366 IGHV4-30-2A0A087WSY4 118 aa7.82□□□□□ -1.16
UBFD1-202ENST00000563366 IGHV4-61A0A0C4DH41 118 aa7.82□□□□□ -1.16
UBFD1-202ENST00000563366 A0A1W2PN81 502 aa7.82□□□□□ -1.16
UBFD1-202ENST00000563366 A0A1W2PPI3 338 aa7.82□□□□□ -1.16
UBFD1-202ENST00000563366 CST7O76096 145 aa7.82□□□□□ -1.16
UBFD1-202ENST00000563366 MSMBP08118 114 aa7.82□□□□□ -1.16
UBFD1-202ENST00000563366 CHRNA7P36544 502 aa7.82□□□□□ -1.16
UBFD1-202ENST00000563366 RAB5CP51148 216 aa7.82□□□□□ -1.16
UBFD1-202ENST00000563366 DYNLT3P51808 116 aa7.82□□□□□ -1.16
UBFD1-202ENST00000563366 F2RL1P55085 397 aa7.82□□□□□ -1.16
UBFD1-202ENST00000563366 PRCDQ00LT1 54 aa7.82□□□□□ -1.16
UBFD1-202ENST00000563366 SPTAN1Q13813 2472 aaKnown RBP7.82□□□□□ -1.16
UBFD1-202ENST00000563366 DEFB113Q30KQ7 82 aa7.82□□□□□ -1.16
UBFD1-202ENST00000563366 SLC25A24Q6NUK1 477 aa7.82□□□□□ -1.16
UBFD1-202ENST00000563366 MMD2Q8IY49 270 aa7.82□□□□□ -1.16
UBFD1-202ENST00000563366 OR1L8Q8NGR8 309 aa7.82□□□□□ -1.16
UBFD1-202ENST00000563366 MBD6Q96DN6 1003 aa7.82□□□□□ -1.16
UBFD1-202ENST00000563366 MALSU1Q96EH3 234 aa7.82□□□□□ -1.16
UBFD1-202ENST00000563366 GINS3Q9BRX5 216 aa7.82□□□□□ -1.16
UBFD1-202ENST00000563366 GGACTQ9BVM4 153 aa7.82□□□□□ -1.16
UBFD1-202ENST00000563366 PARD6GQ9BYG4 376 aaPredicted RBP7.82□□□□□ -1.16
UBFD1-202ENST00000563366 SMIM3Q9BZL3 60 aa7.82□□□□□ -1.16
UBFD1-202ENST00000563366 ARV1Q9H2C2 271 aa7.82□□□□□ -1.16
UBFD1-202ENST00000563366 TET2Q6N021 2002 aaPredicted RBP7.81□□□□□ -1.16
UBFD1-202ENST00000563366 RPS10-NUDT3A0A1W2PQS6 291 aa7.81□□□□□ -1.16
UBFD1-202ENST00000563366 UMAD1C9J7I0 102 aa7.81□□□□□ -1.16
UBFD1-202ENST00000563366 INS-IGF2F8WCM5 200 aa7.81□□□□□ -1.16
UBFD1-202ENST00000563366 RNASEK-C17orf49H0YIS7 233 aa7.81□□□□□ -1.16
UBFD1-202ENST00000563366 SOX15O60248 233 aa7.81□□□□□ -1.16
UBFD1-202ENST00000563366 ATP6V1G1O75348 118 aa7.81□□□□□ -1.16
UBFD1-202ENST00000563366 TSPAN9O75954 239 aa7.81□□□□□ -1.16
UBFD1-202ENST00000563366 ACTL6BO94805 426 aa7.81□□□□□ -1.16
UBFD1-202ENST00000563366 IFNA10P01566 189 aa7.81□□□□□ -1.16
UBFD1-202ENST00000563366 OR8U8P0C7N1 319 aa7.81□□□□□ -1.16
UBFD1-202ENST00000563366 METTL15P1P0C7V9 234 aa7.81□□□□□ -1.16
UBFD1-202ENST00000563366 BRS3P32247 399 aa7.81□□□□□ -1.16
UBFD1-202ENST00000563366 SLC38A11Q08AI6 406 aa7.81□□□□□ -1.16
UBFD1-202ENST00000563366 TMEM267Q0VDI3 215 aaPredicted RBP7.81□□□□□ -1.16
UBFD1-202ENST00000563366 DIAPH2-AS1Q14236 149 aa7.81□□□□□ -1.16
UBFD1-202ENST00000563366 CLINT1Q14677 625 aa7.81□□□□□ -1.16
UBFD1-202ENST00000563366 HCP5Q6MZN7 132 aa7.81□□□□□ -1.16
UBFD1-202ENST00000563366 HSD17B13Q7Z5P4 300 aaPredicted RBP7.81□□□□□ -1.16
UBFD1-202ENST00000563366 TMEM217Q8N7C4 229 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms