RNA–Protein interactions for RNA: ENST00000562866.1

VPS9D1-AS1-202, VPS9D1 antisense RNA 1, humanhuman

TSL 2 BASIC

Gene VPS9D1-AS1, Length 1,753 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-202ENST00000562866 TREML4Q6UXN2 200 aa17.42■□□□□ 0.38
VPS9D1-AS1-202ENST00000562866 TMEM170AQ8WVE7 144 aa17.42■□□□□ 0.38
VPS9D1-AS1-202ENST00000562866 NEIL1Q96FI4 390 aaPredicted RBP17.42■□□□□ 0.38
VPS9D1-AS1-202ENST00000562866 NPVFQ9HCQ7 196 aa17.42■□□□□ 0.38
VPS9D1-AS1-202ENST00000562866 ZNRD1Q9P1U0 126 aa17.42■□□□□ 0.38
VPS9D1-AS1-202ENST00000562866 H0YJW9 148 aa17.41■□□□□ 0.38
VPS9D1-AS1-202ENST00000562866 ERVFRD-1P60508 538 aa17.41■□□□□ 0.38
VPS9D1-AS1-202ENST00000562866 RAB5BP61020 215 aa17.41■□□□□ 0.38
VPS9D1-AS1-202ENST00000562866 MEF2BQ02080 365 aaPredicted RBP17.41■□□□□ 0.38
VPS9D1-AS1-202ENST00000562866 TMEM177Q53S58 311 aa17.41■□□□□ 0.38
VPS9D1-AS1-202ENST00000562866 Q8N7P7 452 aa17.41■□□□□ 0.38
VPS9D1-AS1-202ENST00000562866 OR5B3Q8NH48 314 aa17.41■□□□□ 0.38
VPS9D1-AS1-202ENST00000562866 OR9G1Q8NH87 305 aa17.41■□□□□ 0.38
VPS9D1-AS1-202ENST00000562866 A0A1W2PPH5 198 aa17.4■□□□□ 0.38
VPS9D1-AS1-202ENST00000562866 IL3RAP26951 378 aa17.4■□□□□ 0.38
VPS9D1-AS1-202ENST00000562866 RAB13P51153 203 aa17.4■□□□□ 0.38
VPS9D1-AS1-202ENST00000562866 ADORA2A-AS1P86434 159 aa17.4■□□□□ 0.38
VPS9D1-AS1-202ENST00000562866 RAB31Q13636 194 aa17.4■□□□□ 0.38
VPS9D1-AS1-202ENST00000562866 TMEM249Q2WGJ8 235 aa17.4■□□□□ 0.38
VPS9D1-AS1-202ENST00000562866 PDPNQ86YL7 162 aa17.4■□□□□ 0.38
VPS9D1-AS1-202ENST00000562866 RAB1CQ92928 201 aa17.4■□□□□ 0.38
VPS9D1-AS1-202ENST00000562866 HINT2Q9BX68 163 aa17.4■□□□□ 0.38
VPS9D1-AS1-202ENST00000562866 SIRT7Q9NRC8 400 aa17.4■□□□□ 0.38
VPS9D1-AS1-202ENST00000562866 A0A1W2PPE2 198 aa17.4■□□□□ 0.38
VPS9D1-AS1-202ENST00000562866 C1orf196B1AJZ1 125 aa17.4■□□□□ 0.38
VPS9D1-AS1-202ENST00000562866 CA2P00918 260 aa17.4■□□□□ 0.38
VPS9D1-AS1-202ENST00000562866 MAS1LP35410 378 aa17.4■□□□□ 0.38
VPS9D1-AS1-202ENST00000562866 PPOXP50336 477 aa17.4■□□□□ 0.38
VPS9D1-AS1-202ENST00000562866 ZNF137PP52743 207 aa17.4■□□□□ 0.38
VPS9D1-AS1-202ENST00000562866 OR4A5Q8NH83 315 aa17.4■□□□□ 0.38
VPS9D1-AS1-202ENST00000562866 ISOC2Q96AB3 205 aa17.4■□□□□ 0.38
VPS9D1-AS1-202ENST00000562866 FLYWCH2Q96CP2 140 aaKnown RBP17.4■□□□□ 0.38
VPS9D1-AS1-202ENST00000562866 HARBI1Q96MB7 349 aa17.4■□□□□ 0.38
VPS9D1-AS1-202ENST00000562866 PCGF1Q9BSM1 259 aa17.4■□□□□ 0.38
VPS9D1-AS1-202ENST00000562866 SRRM4A7MD48 611 aaKnown RBP17.39■□□□□ 0.37
VPS9D1-AS1-202ENST00000562866 SAA1P0DJI8 122 aaPredicted RBP17.39■□□□□ 0.37
VPS9D1-AS1-202ENST00000562866 VSTM2AQ8TAG5 236 aa17.39■□□□□ 0.37
VPS9D1-AS1-202ENST00000562866 MGST2Q99735 147 aa17.39■□□□□ 0.37
VPS9D1-AS1-202ENST00000562866 BIN3Q9NQY0 253 aa17.39■□□□□ 0.37
VPS9D1-AS1-202ENST00000562866 RALYQ9UKM9 306 aaKnown RBP17.39■□□□□ 0.37
VPS9D1-AS1-202ENST00000562866 LAMA5O15230 3695 aa17.39■□□□□ 0.37
VPS9D1-AS1-202ENST00000562866 MAP1BP46821 2468 aaKnown RBP17.38■□□□□ 0.37
VPS9D1-AS1-202ENST00000562866 TEX50A0A1B0GTY4 177 aa17.38■□□□□ 0.37
VPS9D1-AS1-202ENST00000562866 A0A1W2PPV4 95 aa17.38■□□□□ 0.37
VPS9D1-AS1-202ENST00000562866 CXorf65A6NEN9 183 aa17.38■□□□□ 0.37
VPS9D1-AS1-202ENST00000562866 TMEM250H0YL14 139 aa17.38■□□□□ 0.37
VPS9D1-AS1-202ENST00000562866 IGHV1-8P0DP01 117 aa17.38■□□□□ 0.37
VPS9D1-AS1-202ENST00000562866 SFTPCP11686 197 aa17.38■□□□□ 0.37
VPS9D1-AS1-202ENST00000562866 GRNP28799 593 aaKnown RBP17.38■□□□□ 0.37
VPS9D1-AS1-202ENST00000562866 OR4C13Q8NGP0 309 aa17.38■□□□□ 0.37
VPS9D1-AS1-202ENST00000562866 NABP2Q9BQ15 211 aa17.38■□□□□ 0.37
VPS9D1-AS1-202ENST00000562866 TMEM204Q9BSN7 226 aa17.38■□□□□ 0.37
VPS9D1-AS1-202ENST00000562866 GGTLC1Q9BX51 225 aa17.38■□□□□ 0.37
VPS9D1-AS1-202ENST00000562866 LSM4Q9Y4Z0 139 aaKnown RBP17.38■□□□□ 0.37
VPS9D1-AS1-202ENST00000562866 PXMP4Q9Y6I8 212 aa17.38■□□□□ 0.37
VPS9D1-AS1-202ENST00000562866 PIEZO2Q9H5I5 2752 aa17.38■□□□□ 0.37
VPS9D1-AS1-202ENST00000562866 CEP295Q9C0D2 2601 aa17.38■□□□□ 0.37
VPS9D1-AS1-202ENST00000562866 BSNQ9UPA5 3926 aa17.38■□□□□ 0.37
VPS9D1-AS1-202ENST00000562866 DOCK11Q5JSL3 2073 aa17.38■□□□□ 0.37
VPS9D1-AS1-202ENST00000562866 HMGB3O15347 200 aaKnown RBP17.38■□□□□ 0.37
VPS9D1-AS1-202ENST00000562866 SIAH2O43255 324 aa17.38■□□□□ 0.37
VPS9D1-AS1-202ENST00000562866 RAB5AP20339 215 aa17.38■□□□□ 0.37
VPS9D1-AS1-202ENST00000562866 TEPPQ6URK8 271 aa17.38■□□□□ 0.37
VPS9D1-AS1-202ENST00000562866 TNFRSF14Q92956 283 aa17.38■□□□□ 0.37
VPS9D1-AS1-202ENST00000562866 WASHC3Q9Y3C0 194 aa17.38■□□□□ 0.37
VPS9D1-AS1-202ENST00000562866 TSPAN9O75954 239 aa17.37■□□□□ 0.37
VPS9D1-AS1-202ENST00000562866 USF1P22415 310 aaPredicted RBP17.37■□□□□ 0.37
VPS9D1-AS1-202ENST00000562866 CD81P60033 236 aa17.37■□□□□ 0.37
VPS9D1-AS1-202ENST00000562866 FAM24BQ8N5W8 94 aa17.37■□□□□ 0.37
VPS9D1-AS1-202ENST00000562866 ST6GALNAC6Q969X2 333 aa17.37■□□□□ 0.37
VPS9D1-AS1-202ENST00000562866 TMEM133Q9H2Q1 129 aa17.37■□□□□ 0.37
VPS9D1-AS1-202ENST00000562866 TMPRSS5Q9H3S3 457 aa17.37■□□□□ 0.37
VPS9D1-AS1-202ENST00000562866 YLPM1P49750 1951 aaKnown RBP17.36■□□□□ 0.37
VPS9D1-AS1-202ENST00000562866 ZNF727A8MUV8 499 aa17.36■□□□□ 0.37
VPS9D1-AS1-202ENST00000562866 EIF3GO75821 320 aaKnown RBP eCLIP17.36■□□□□ 0.37
VPS9D1-AS1-202ENST00000562866 MC5RP33032 325 aa17.36■□□□□ 0.37
VPS9D1-AS1-202ENST00000562866 C2orf83Q53S99 150 aa17.36■□□□□ 0.37
VPS9D1-AS1-202ENST00000562866 TGIF2LXQ8IUE1 241 aa17.36■□□□□ 0.37
VPS9D1-AS1-202ENST00000562866 IQCF2Q8IXL9 164 aa17.36■□□□□ 0.37
VPS9D1-AS1-202ENST00000562866 MALSU1Q96EH3 234 aa17.36■□□□□ 0.37
VPS9D1-AS1-202ENST00000562866 COMMD5Q9GZQ3 224 aa17.36■□□□□ 0.37
VPS9D1-AS1-202ENST00000562866 YIF1AO95070 293 aa17.35■□□□□ 0.37
VPS9D1-AS1-202ENST00000562866 IGHV2-70P01814 119 aa17.35■□□□□ 0.37
VPS9D1-AS1-202ENST00000562866 MYOD1P15172 320 aa17.35■□□□□ 0.37
VPS9D1-AS1-202ENST00000562866 RPL8P62917 257 aaKnown RBP17.35■□□□□ 0.37
VPS9D1-AS1-202ENST00000562866 ARSJQ5FYB0 599 aaPredicted RBP17.35■□□□□ 0.37
VPS9D1-AS1-202ENST00000562866 OR1L8Q8NGR8 309 aa17.35■□□□□ 0.37
VPS9D1-AS1-202ENST00000562866 SAV1Q9H4B6 383 aaPredicted RBP17.35■□□□□ 0.37
VPS9D1-AS1-202ENST00000562866 SDF2L1Q9HCN8 221 aa17.35■□□□□ 0.37
VPS9D1-AS1-202ENST00000562866 PRELID1Q9Y255 219 aa17.35■□□□□ 0.37
VPS9D1-AS1-202ENST00000562866 TET2Q6N021 2002 aaPredicted RBP17.35■□□□□ 0.37
VPS9D1-AS1-202ENST00000562866 COL8A2P25067 703 aa17.35■□□□□ 0.37
VPS9D1-AS1-202ENST00000562866 REG1BP48304 166 aa17.35■□□□□ 0.37
VPS9D1-AS1-202ENST00000562866 TMEM167AQ8TBQ9 72 aa17.35■□□□□ 0.37
VPS9D1-AS1-202ENST00000562866 YPEL4Q96NS1 127 aa17.35■□□□□ 0.37
VPS9D1-AS1-202ENST00000562866 RAB1BQ9H0U4 201 aa17.35■□□□□ 0.37
VPS9D1-AS1-202ENST00000562866 NAT8Q9UHE5 227 aa17.35■□□□□ 0.37
VPS9D1-AS1-202ENST00000562866 DMXL2Q8TDJ6 3036 aa17.35■□□□□ 0.37
VPS9D1-AS1-202ENST00000562866 ATMQ13315 3056 aa17.34■□□□□ 0.37
VPS9D1-AS1-202ENST00000562866 INS-IGF2F8WCM5 200 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms