RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 LFNGQ8NES3 379 aa10.46□□□□□ -0.73
CDH1-204ENST00000562118 LHFPL5Q8TAF8 219 aa10.46□□□□□ -0.73
CDH1-204ENST00000562118 IL22RA2Q969J5 263 aa10.46□□□□□ -0.73
CDH1-204ENST00000562118 WSB1Q9Y6I7 421 aa10.46□□□□□ -0.73
CDH1-204ENST00000562118 TRBV9A0A0B4J1U6 114 aa10.45□□□□□ -0.74
CDH1-204ENST00000562118 TEX13DA0A0J9YY54 714 aaPredicted RBP10.45□□□□□ -0.74
CDH1-204ENST00000562118 MSGN1A6NI15 193 aa10.45□□□□□ -0.74
CDH1-204ENST00000562118 C15orf61A6NNL5 157 aa10.45□□□□□ -0.74
CDH1-204ENST00000562118 NPIPB5A8MRT5 1133 aa10.45□□□□□ -0.74
CDH1-204ENST00000562118 TSPAN15O95858 294 aa10.45□□□□□ -0.74
CDH1-204ENST00000562118 KRASP01116 189 aa10.45□□□□□ -0.74
CDH1-204ENST00000562118 RPLP1P05386 114 aaKnown RBP10.45□□□□□ -0.74
CDH1-204ENST00000562118 CRYGCP07315 174 aa10.45□□□□□ -0.74
CDH1-204ENST00000562118 OR5AC1P0C628 307 aa10.45□□□□□ -0.74
CDH1-204ENST00000562118 OR9G9P0C7N8 305 aa10.45□□□□□ -0.74
CDH1-204ENST00000562118 G6PCP35575 357 aa10.45□□□□□ -0.74
CDH1-204ENST00000562118 UBE2MP61081 183 aaKnown RBP10.45□□□□□ -0.74
CDH1-204ENST00000562118 TMEM187Q14656 261 aa10.45□□□□□ -0.74
CDH1-204ENST00000562118 TNXAQ16473 311 aa10.45□□□□□ -0.74
CDH1-204ENST00000562118 ECSCRQ19T08 205 aa10.45□□□□□ -0.74
CDH1-204ENST00000562118 HIST2H2BDQ6DRA6 164 aa10.45□□□□□ -0.74
CDH1-204ENST00000562118 THOC7Q6I9Y2 204 aaKnown RBP10.45□□□□□ -0.74
CDH1-204ENST00000562118 SSX9Q7RTT3 188 aa10.45□□□□□ -0.74
CDH1-204ENST00000562118 ZNF429Q86V71 674 aa10.45□□□□□ -0.74
CDH1-204ENST00000562118 TTC9CQ8N5M4 171 aa10.45□□□□□ -0.74
CDH1-204ENST00000562118 GRPEL2Q8TAA5 225 aa10.45□□□□□ -0.74
CDH1-204ENST00000562118 FAM110DQ8TAY7 271 aaPredicted RBP10.45□□□□□ -0.74
CDH1-204ENST00000562118 UBE2E2Q96LR5 201 aa10.45□□□□□ -0.74
CDH1-204ENST00000562118 SPIN2AQ99865 258 aa10.45□□□□□ -0.74
CDH1-204ENST00000562118 SPIN2BQ9BPZ2 258 aa10.45□□□□□ -0.74
CDH1-204ENST00000562118 KLK15Q9H2R5 256 aa10.45□□□□□ -0.74
CDH1-204ENST00000562118 TBC1D24Q9ULP9 559 aa10.45□□□□□ -0.74
CDH1-204ENST00000562118 A0A1W2PN81 502 aa10.44□□□□□ -0.74
CDH1-204ENST00000562118 TCRBV4S1A1TA0A5B7 111 aa10.44□□□□□ -0.74
CDH1-204ENST00000562118 CNIH1O95406 144 aa10.44□□□□□ -0.74
CDH1-204ENST00000562118 SERPINE2P07093 398 aa10.44□□□□□ -0.74
CDH1-204ENST00000562118 CHRNA7P36544 502 aa10.44□□□□□ -0.74
CDH1-204ENST00000562118 RPL27AP46776 148 aaKnown RBP10.44□□□□□ -0.74
CDH1-204ENST00000562118 RAB9AP51151 201 aa10.44□□□□□ -0.74
CDH1-204ENST00000562118 CCR6P51684 374 aa10.44□□□□□ -0.74
CDH1-204ENST00000562118 ERVK-16P61578 105 aa10.44□□□□□ -0.74
CDH1-204ENST00000562118 GNB1P62873 340 aa10.44□□□□□ -0.74
CDH1-204ENST00000562118 ASAH1Q13510 395 aa10.44□□□□□ -0.74
CDH1-204ENST00000562118 ZNF846Q147U1 533 aa10.44□□□□□ -0.74
CDH1-204ENST00000562118 TMEM128Q5BJH2 165 aa10.44□□□□□ -0.74
CDH1-204ENST00000562118 CXorf66Q5JRM2 361 aaPredicted RBP10.44□□□□□ -0.74
CDH1-204ENST00000562118 UNQ5815/PRO19632Q6UWF5 114 aa10.44□□□□□ -0.74
CDH1-204ENST00000562118 ETV3LQ6ZN32 361 aa10.44□□□□□ -0.74
CDH1-204ENST00000562118 SLC25A42Q86VD7 318 aa10.44□□□□□ -0.74
CDH1-204ENST00000562118 ZNF491Q8N8L2 437 aa10.44□□□□□ -0.74
CDH1-204ENST00000562118 LRTM2Q8N967 370 aa10.44□□□□□ -0.74
CDH1-204ENST00000562118 DMBX1Q8NFW5 382 aa10.44□□□□□ -0.74
CDH1-204ENST00000562118 TSC22D3Q99576 134 aa10.44□□□□□ -0.74
CDH1-204ENST00000562118 SLA2Q9H6Q3 261 aa10.44□□□□□ -0.74
CDH1-204ENST00000562118 NDUFA4L2Q9NRX3 87 aa10.44□□□□□ -0.74
CDH1-204ENST00000562118 ZNF257Q9Y2Q1 563 aa10.44□□□□□ -0.74
CDH1-204ENST00000562118 IGLC7A0M8Q6 106 aa10.43□□□□□ -0.74
CDH1-204ENST00000562118 DBX1A6NMT0 343 aa10.43□□□□□ -0.74
CDH1-204ENST00000562118 INS-IGF2F8WCM5 200 aa10.43□□□□□ -0.74
CDH1-204ENST00000562118 I3L521 148 aa10.43□□□□□ -0.74
CDH1-204ENST00000562118 LYRM1O43325 122 aa10.43□□□□□ -0.74
CDH1-204ENST00000562118 UPK1BO75841 260 aa10.43□□□□□ -0.74
CDH1-204ENST00000562118 MYOD1P15172 320 aa10.43□□□□□ -0.74
CDH1-204ENST00000562118 CTRB1P17538 263 aa10.43□□□□□ -0.74
CDH1-204ENST00000562118 MECP2P51608 486 aaKnown RBP10.43□□□□□ -0.74
CDH1-204ENST00000562118 IFITM3Q01628 133 aa10.43□□□□□ -0.74
CDH1-204ENST00000562118 FHL3Q13643 280 aa10.43□□□□□ -0.74
CDH1-204ENST00000562118 SP6Q3SY56 376 aa10.43□□□□□ -0.74
CDH1-204ENST00000562118 PDLIM3Q53GG5 364 aaPredicted RBP10.43□□□□□ -0.74
CDH1-204ENST00000562118 CTRB2Q6GPI1 263 aa10.43□□□□□ -0.74
CDH1-204ENST00000562118 FAM219AQ8IW50 185 aa10.43□□□□□ -0.74
CDH1-204ENST00000562118 SGPP2Q8IWX5 399 aa10.43□□□□□ -0.74
CDH1-204ENST00000562118 SELENOHQ8IZQ5 122 aaKnown RBP10.43□□□□□ -0.74
CDH1-204ENST00000562118 OR5B3Q8NH48 314 aa10.43□□□□□ -0.74
CDH1-204ENST00000562118 C4orf3Q8WVX3 66 aa10.43□□□□□ -0.74
CDH1-204ENST00000562118 RBPMSQ93062 196 aaKnown RBP10.43□□□□□ -0.74
CDH1-204ENST00000562118 PRNDQ9UKY0 176 aa10.43□□□□□ -0.74
CDH1-204ENST00000562118 A0A0B4J293 547 aa10.42□□□□□ -0.74
CDH1-204ENST00000562118 A0A0G2JRQ6 117 aa10.42□□□□□ -0.74
CDH1-204ENST00000562118 TEX50A0A1B0GTY4 177 aa10.42□□□□□ -0.74
CDH1-204ENST00000562118 CENPXA8MT69 81 aa10.42□□□□□ -0.74
CDH1-204ENST00000562118 ACTL6BO94805 426 aa10.42□□□□□ -0.74
CDH1-204ENST00000562118 ATG12O94817 140 aa10.42□□□□□ -0.74
CDH1-204ENST00000562118 LCNL1Q6ZST4 164 aa10.42□□□□□ -0.74
CDH1-204ENST00000562118 C18orf65Q6ZTR6 163 aa10.42□□□□□ -0.74
CDH1-204ENST00000562118 HSD17B13Q7Z5P4 300 aaPredicted RBP10.42□□□□□ -0.74
CDH1-204ENST00000562118 ZNF695Q8IW36 515 aa10.42□□□□□ -0.74
CDH1-204ENST00000562118 OR4F17Q8NGA8 305 aa10.42□□□□□ -0.74
CDH1-204ENST00000562118 LSM10Q969L4 123 aaKnown RBP10.42□□□□□ -0.74
CDH1-204ENST00000562118 OR4F4Q96R69 305 aa10.42□□□□□ -0.74
CDH1-204ENST00000562118 P2RX4Q99571 388 aa10.42□□□□□ -0.74
CDH1-204ENST00000562118 QTRT1Q9BXR0 403 aaKnown RBP10.42□□□□□ -0.74
CDH1-204ENST00000562118 FKBP11Q9NYL4 201 aa10.42□□□□□ -0.74
CDH1-204ENST00000562118 DUXBA0A1W2PPF3 345 aa10.41□□□□□ -0.74
CDH1-204ENST00000562118 RBMXL2O75526 392 aaKnown RBP10.41□□□□□ -0.74
CDH1-204ENST00000562118 PSMB6P28072 239 aa10.41□□□□□ -0.74
CDH1-204ENST00000562118 INPP1P49441 399 aa10.41□□□□□ -0.74
CDH1-204ENST00000562118 SRPXP78539 464 aa10.41□□□□□ -0.74
CDH1-204ENST00000562118 WT1-ASQ06250 92 aa10.41□□□□□ -0.74
CDH1-204ENST00000562118 NSUN5P1Q3KNT7 163 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms