RNA–Protein interactions for RNA: ENST00000561945.1

SPG7-205, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, human

TSL 3

Gene SPG7, Length 411 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPG7-205	ENST00000561945		J3QRK9	145 aa		10.87	□□□□□ -0.67
SPG7-205	ENST00000561945	HLA-G	P17693	338 aa		10.87	□□□□□ -0.67
SPG7-205	ENST00000561945	ELL	P55199	621 aa	Predicted RBP	10.87	□□□□□ -0.67
SPG7-205	ENST00000561945	SCAND1	P57086	179 aa		10.87	□□□□□ -0.67
SPG7-205	ENST00000561945	TIMM50	Q3ZCQ8	353 aa		10.87	□□□□□ -0.67
SPG7-205	ENST00000561945	WFDC3	Q8IUB2	231 aa		10.87	□□□□□ -0.67
SPG7-205	ENST00000561945	ZBTB34	Q8NCN2	500 aa		10.87	□□□□□ -0.67
SPG7-205	ENST00000561945	TCTEX1D2	Q8WW35	142 aa		10.87	□□□□□ -0.67
SPG7-205	ENST00000561945	CACNG8	Q8WXS5	425 aa		10.87	□□□□□ -0.67
SPG7-205	ENST00000561945	MARC2	Q969Z3	335 aa		10.87	□□□□□ -0.67
SPG7-205	ENST00000561945	CXorf58	Q96LI9	332 aa		10.87	□□□□□ -0.67
SPG7-205	ENST00000561945	AIFM2	Q9BRQ8	373 aa		10.87	□□□□□ -0.67
SPG7-205	ENST00000561945	TXNL4B	Q9NX01	149 aa	Known RBP	10.87	□□□□□ -0.67
SPG7-205	ENST00000561945	SPATA2	Q9UM82	520 aa		10.87	□□□□□ -0.67
SPG7-205	ENST00000561945	DPPA5	A6NC42	116 aa		10.86	□□□□□ -0.67
SPG7-205	ENST00000561945	OR2B8P	P59922	312 aa		10.86	□□□□□ -0.67
SPG7-205	ENST00000561945	ANKRD55	Q3KP44	614 aa		10.86	□□□□□ -0.67
SPG7-205	ENST00000561945	UXS1	Q8NBZ7	420 aa		10.86	□□□□□ -0.67
SPG7-205	ENST00000561945	ZNF502	Q8TBZ5	544 aa		10.86	□□□□□ -0.67
SPG7-205	ENST00000561945	GGTLC1	Q9BX51	225 aa		10.86	□□□□□ -0.67
SPG7-205	ENST00000561945	ZNF436	Q9C0F3	470 aa	Predicted RBP	10.86	□□□□□ -0.67
SPG7-205	ENST00000561945	VCX3A	Q9NNX9	186 aa		10.86	□□□□□ -0.67
SPG7-205	ENST00000561945	TAS2R8	Q9NYW2	309 aa		10.86	□□□□□ -0.67
SPG7-205	ENST00000561945	MRPL27	Q9P0M9	148 aa	Known RBP	10.86	□□□□□ -0.67
SPG7-205	ENST00000561945		A0A087WXM4	84 aa		10.85	□□□□□ -0.67
SPG7-205	ENST00000561945	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	10.85	□□□□□ -0.67
SPG7-205	ENST00000561945	IGLC7	A0M8Q6	106 aa		10.85	□□□□□ -0.67
SPG7-205	ENST00000561945	TNFAIP8	O95379	198 aa		10.85	□□□□□ -0.67
SPG7-205	ENST00000561945	IGHV3-23	P01764	117 aa		10.85	□□□□□ -0.67
SPG7-205	ENST00000561945	TAS2R31	P59538	309 aa		10.85	□□□□□ -0.67
SPG7-205	ENST00000561945	GNG2	P59768	71 aa		10.85	□□□□□ -0.67
SPG7-205	ENST00000561945	UNQ9165/PRO28630	Q6UXU0	137 aa		10.85	□□□□□ -0.67
SPG7-205	ENST00000561945	OR52B4	Q8NGK2	314 aa		10.85	□□□□□ -0.67
SPG7-205	ENST00000561945	CCL28	Q9NRJ3	127 aa		10.85	□□□□□ -0.67
SPG7-205	ENST00000561945	SSR3	Q9UNL2	185 aa		10.85	□□□□□ -0.67
SPG7-205	ENST00000561945	TP53TG1	Q9Y2A0	90 aa		10.85	□□□□□ -0.67
SPG7-205	ENST00000561945	MFSD2B	A6NFX1	497 aa		10.84	□□□□□ -0.67
SPG7-205	ENST00000561945	CLEC3B	P05452	202 aa		10.84	□□□□□ -0.67
SPG7-205	ENST00000561945	MYOD1	P15172	320 aa		10.84	□□□□□ -0.67
SPG7-205	ENST00000561945	ATF4	P18848	351 aa	Predicted RBP	10.84	□□□□□ -0.67
SPG7-205	ENST00000561945	PTBP1	P26599	531 aa	Known RBP eCLIP	10.84	□□□□□ -0.67
SPG7-205	ENST00000561945	SFXN4	Q6P4A7	337 aa		10.84	□□□□□ -0.67
SPG7-205	ENST00000561945	HOGA1	Q86XE5	327 aa		10.84	□□□□□ -0.67
SPG7-205	ENST00000561945	CADM3	Q8N126	398 aa		10.84	□□□□□ -0.67
SPG7-205	ENST00000561945	LGALS14	Q8TCE9	139 aa		10.84	□□□□□ -0.67
SPG7-205	ENST00000561945	LINC00476	Q8WZB0	136 aa		10.84	□□□□□ -0.67
SPG7-205	ENST00000561945	GPHA2	Q96T91	129 aa		10.84	□□□□□ -0.67
SPG7-205	ENST00000561945	ATP6V0B	Q99437	205 aa		10.84	□□□□□ -0.67
SPG7-205	ENST00000561945	C5orf66	Q9H5L9	145 aa		10.84	□□□□□ -0.67
SPG7-205	ENST00000561945	RHBDL2	Q9NX52	303 aa		10.84	□□□□□ -0.67
SPG7-205	ENST00000561945		S4R3C0	116 aa		10.84	□□□□□ -0.67
SPG7-205	ENST00000561945		A0A0A6YYH2	397 aa		10.83	□□□□□ -0.68
SPG7-205	ENST00000561945	ZNF320	A2RRD8	509 aa		10.83	□□□□□ -0.68
SPG7-205	ENST00000561945	SMIM30	A4D0T7	59 aa		10.83	□□□□□ -0.68
SPG7-205	ENST00000561945		A6NJ64	397 aa		10.83	□□□□□ -0.68
SPG7-205	ENST00000561945	UPK2	O00526	184 aa		10.83	□□□□□ -0.68
SPG7-205	ENST00000561945	HPRT1	P00492	218 aa		10.83	□□□□□ -0.68
SPG7-205	ENST00000561945	PPY	P01298	95 aa		10.83	□□□□□ -0.68
SPG7-205	ENST00000561945	FCGR2C	P31995	323 aa		10.83	□□□□□ -0.68
SPG7-205	ENST00000561945	TNFRSF9	Q07011	255 aa		10.83	□□□□□ -0.68
SPG7-205	ENST00000561945	NEDD8	Q15843	81 aa		10.83	□□□□□ -0.68
SPG7-205	ENST00000561945	TM4SF20	Q53R12	229 aa		10.83	□□□□□ -0.68
SPG7-205	ENST00000561945	THOC7	Q6I9Y2	204 aa	Known RBP	10.83	□□□□□ -0.68
SPG7-205	ENST00000561945	BTNL8	Q6UX41	500 aa		10.83	□□□□□ -0.68
SPG7-205	ENST00000561945		Q6ZWC4	215 aa		10.83	□□□□□ -0.68
SPG7-205	ENST00000561945	SSX9	Q7RTT3	188 aa		10.83	□□□□□ -0.68
SPG7-205	ENST00000561945	SPAG16	Q8N0X2	631 aa		10.83	□□□□□ -0.68
SPG7-205	ENST00000561945	BEST4	Q8NFU0	473 aa		10.83	□□□□□ -0.68
SPG7-205	ENST00000561945	TSPAN14	Q8NG11	270 aa		10.83	□□□□□ -0.68
SPG7-205	ENST00000561945	OR13F1	Q8NGS4	319 aa		10.83	□□□□□ -0.68
SPG7-205	ENST00000561945	VN1R17P	Q8TDU5	208 aa		10.83	□□□□□ -0.68
SPG7-205	ENST00000561945	SLC25A38	Q96DW6	304 aa		10.83	□□□□□ -0.68
SPG7-205	ENST00000561945	DAPK2	Q9UIK4	370 aa		10.83	□□□□□ -0.68
SPG7-205	ENST00000561945	UFC1	Q9Y3C8	167 aa		10.83	□□□□□ -0.68
SPG7-205	ENST00000561945	ETV7	Q9Y603	341 aa		10.83	□□□□□ -0.68
SPG7-205	ENST00000561945	PCLO	Q9Y6V0	5065 aa		10.82	□□□□□ -0.68
SPG7-205	ENST00000561945	TSPAN4	O14817	238 aa		10.82	□□□□□ -0.68
SPG7-205	ENST00000561945	REG1A	P05451	166 aa		10.82	□□□□□ -0.68
SPG7-205	ENST00000561945	DEFA4	P12838	97 aa		10.82	□□□□□ -0.68
SPG7-205	ENST00000561945	NQO2	P16083	231 aa		10.82	□□□□□ -0.68
SPG7-205	ENST00000561945	OR2C3	Q8N628	320 aa		10.82	□□□□□ -0.68
SPG7-205	ENST00000561945	OR1L6	Q8NGR2	347 aa		10.82	□□□□□ -0.68
SPG7-205	ENST00000561945	GIMAP1	Q8WWP7	306 aa		10.82	□□□□□ -0.68
SPG7-205	ENST00000561945	TMEM190	Q8WZ59	177 aa		10.82	□□□□□ -0.68
SPG7-205	ENST00000561945	SPAG8	Q99932	426 aa	Predicted RBP	10.82	□□□□□ -0.68
SPG7-205	ENST00000561945	PLEKHA2	Q9HB19	425 aa		10.82	□□□□□ -0.68
SPG7-205	ENST00000561945	THYN1	Q9P016	225 aa		10.82	□□□□□ -0.68
SPG7-205	ENST00000561945	KIAA1109	Q2LD37	5005 aa		10.82	□□□□□ -0.68
SPG7-205	ENST00000561945	TRAV3	A0A0B4J244	114 aa		10.81	□□□□□ -0.68
SPG7-205	ENST00000561945	TNFSF12	O43508	249 aa		10.81	□□□□□ -0.68
SPG7-205	ENST00000561945	TMEM127	O75204	238 aa		10.81	□□□□□ -0.68
SPG7-205	ENST00000561945	SCAF4	O95104	1147 aa	Known RBP	10.81	□□□□□ -0.68
SPG7-205	ENST00000561945	GPR183	P32249	361 aa		10.81	□□□□□ -0.68
SPG7-205	ENST00000561945	ARPC4	P59998	168 aa		10.81	□□□□□ -0.68
SPG7-205	ENST00000561945	CATR1	Q13166	79 aa		10.81	□□□□□ -0.68
SPG7-205	ENST00000561945	HSD17B13	Q7Z5P4	300 aa	Predicted RBP	10.81	□□□□□ -0.68
SPG7-205	ENST00000561945	GVQW1	Q8N7I0	195 aa		10.81	□□□□□ -0.68
SPG7-205	ENST00000561945	CD300LF	Q8TDQ1	290 aa		10.81	□□□□□ -0.68
SPG7-205	ENST00000561945	SECTM1	Q8WVN6	248 aa		10.81	□□□□□ -0.68
SPG7-205	ENST00000561945	COMMD9	Q9P000	198 aa		10.81	□□□□□ -0.68

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