RNA–Protein interactions for RNA: ENST00000561940.1

SMG1-204, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 964 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-204ENST00000561940 PTPRBP23467 1997 aa2.92□□□□□ -1.94
SMG1-204ENST00000561940 NAV1Q8NEY1 1877 aa2.92□□□□□ -1.94
SMG1-204ENST00000561940 DNHD1Q96M86 4753 aa2.92□□□□□ -1.94
SMG1-204ENST00000561940 CCDC168Q8NDH2 2452 aa2.92□□□□□ -1.94
SMG1-204ENST00000561940 ADGRG4Q8IZF6 3080 aa2.91□□□□□ -1.94
SMG1-204ENST00000561940 IGHV3OR15-7A0A075B7D8 119 aa2.91□□□□□ -1.94
SMG1-204ENST00000561940 A0A1W2PNM2 257 aa2.91□□□□□ -1.94
SMG1-204ENST00000561940 DAPL1A0PJW8 107 aa2.91□□□□□ -1.94
SMG1-204ENST00000561940 SDHAF1A6NFY7 115 aa2.91□□□□□ -1.94
SMG1-204ENST00000561940 OPN1SWP03999 348 aa2.91□□□□□ -1.94
SMG1-204ENST00000561940 CTSEP14091 401 aa2.91□□□□□ -1.94
SMG1-204ENST00000561940 CD99P14209 185 aa2.91□□□□□ -1.94
SMG1-204ENST00000561940 GABRA3P34903 492 aa2.91□□□□□ -1.94
SMG1-204ENST00000561940 GABARAPL2P60520 117 aa2.91□□□□□ -1.94
SMG1-204ENST00000561940 TSPAN31Q12999 210 aa2.91□□□□□ -1.94
SMG1-204ENST00000561940 DNAL1Q4LDG9 190 aa2.91□□□□□ -1.94
SMG1-204ENST00000561940 CD302Q8IX05 232 aa2.91□□□□□ -1.94
SMG1-204ENST00000561940 DEFB119Q8N690 84 aa2.91□□□□□ -1.94
SMG1-204ENST00000561940 OR10D4PQ8NGN7 298 aa2.91□□□□□ -1.94
SMG1-204ENST00000561940 RAD51AP1Q96B01 352 aa2.91□□□□□ -1.94
SMG1-204ENST00000561940 GALMQ96C23 342 aa2.91□□□□□ -1.94
SMG1-204ENST00000561940 OR8B2Q96RD0 313 aa2.91□□□□□ -1.94
SMG1-204ENST00000561940 LLPHQ9BRT6 129 aaKnown RBP2.91□□□□□ -1.94
SMG1-204ENST00000561940 DRC3Q9H069 523 aa2.91□□□□□ -1.94
SMG1-204ENST00000561940 CELSR2Q9HCU4 2923 aa2.91□□□□□ -1.94
SMG1-204ENST00000561940 STAB1Q9NY15 2570 aa2.91□□□□□ -1.94
SMG1-204ENST00000561940 DSCAML1Q8TD84 2053 aa2.91□□□□□ -1.94
SMG1-204ENST00000561940 B4DEV8 164 aa2.9□□□□□ -1.95
SMG1-204ENST00000561940 E7EQL1 145 aa2.9□□□□□ -1.95
SMG1-204ENST00000561940 M0QYV0 167 aa2.9□□□□□ -1.95
SMG1-204ENST00000561940 CCRL2O00421 344 aa2.9□□□□□ -1.95
SMG1-204ENST00000561940 STX10O60499 249 aa2.9□□□□□ -1.95
SMG1-204ENST00000561940 FBP1P09467 338 aa2.9□□□□□ -1.95
SMG1-204ENST00000561940 GADD45AP24522 165 aa2.9□□□□□ -1.95
SMG1-204ENST00000561940 PSMA1P25786 263 aaKnown RBP2.9□□□□□ -1.95
SMG1-204ENST00000561940 CLDN12P56749 244 aa2.9□□□□□ -1.95
SMG1-204ENST00000561940 BSPH1Q075Z2 132 aa2.9□□□□□ -1.95
SMG1-204ENST00000561940 C4orf26Q17RF5 130 aa2.9□□□□□ -1.95
SMG1-204ENST00000561940 KRTAP5-7Q6L8G8 165 aa2.9□□□□□ -1.95
SMG1-204ENST00000561940 FUNDC1Q8IVP5 155 aa2.9□□□□□ -1.95
SMG1-204ENST00000561940 RIBC1Q8N443 379 aaPredicted RBP2.9□□□□□ -1.95
SMG1-204ENST00000561940 TAMM41Q96BW9 452 aa2.9□□□□□ -1.95
SMG1-204ENST00000561940 HIGD2AQ9BW72 106 aa2.9□□□□□ -1.95
SMG1-204ENST00000561940 NKIRAS1Q9NYS0 192 aa2.9□□□□□ -1.95
SMG1-204ENST00000561940 PDZD2O15018 2839 aa2.9□□□□□ -1.95
SMG1-204ENST00000561940 KNL1Q8NG31 2342 aa2.9□□□□□ -1.95
SMG1-204ENST00000561940 MUC22E2RYF6 1773 aaPredicted RBP2.89□□□□□ -1.95
SMG1-204ENST00000561940 PCDH15Q96QU1 1955 aa2.89□□□□□ -1.95
SMG1-204ENST00000561940 F5H5T6 163 aa2.89□□□□□ -1.95
SMG1-204ENST00000561940 ZW10O43264 779 aa2.89□□□□□ -1.95
SMG1-204ENST00000561940 CTSGP08311 255 aa2.89□□□□□ -1.95
SMG1-204ENST00000561940 KRT7P08729 469 aa2.89□□□□□ -1.95
SMG1-204ENST00000561940 HIST1H1CP16403 213 aaKnown RBP2.89□□□□□ -1.95
SMG1-204ENST00000561940 CFL1P23528 166 aaKnown RBP2.89□□□□□ -1.95
SMG1-204ENST00000561940 AGTR1P30556 359 aa2.89□□□□□ -1.95
SMG1-204ENST00000561940 MED21Q13503 144 aa2.89□□□□□ -1.95
SMG1-204ENST00000561940 OR8G1Q15617 311 aa2.89□□□□□ -1.95
SMG1-204ENST00000561940 TRMT12Q53H54 448 aaKnown RBP2.89□□□□□ -1.95
SMG1-204ENST00000561940 TMEM75Q8N9X5 138 aa2.89□□□□□ -1.95
SMG1-204ENST00000561940 TMEM208Q9BTX3 173 aa2.89□□□□□ -1.95
SMG1-204ENST00000561940 UBQLN4Q9NRR5 601 aa2.89□□□□□ -1.95
SMG1-204ENST00000561940 GLS2Q9UI32 602 aa2.89□□□□□ -1.95
SMG1-204ENST00000561940 JMJD1CQ15652 2540 aa2.88□□□□□ -1.95
SMG1-204ENST00000561940 H3BSA7 217 aa2.88□□□□□ -1.95
SMG1-204ENST00000561940 SLC25A20O43772 301 aa2.88□□□□□ -1.95
SMG1-204ENST00000561940 HPGDSO60760 199 aa2.88□□□□□ -1.95
SMG1-204ENST00000561940 APODP05090 189 aa2.88□□□□□ -1.95
SMG1-204ENST00000561940 CRABP1P29762 137 aa2.88□□□□□ -1.95
SMG1-204ENST00000561940 TNFRSF9Q07011 255 aa2.88□□□□□ -1.95
SMG1-204ENST00000561940 C1DQ13901 141 aaKnown RBP2.88□□□□□ -1.95
SMG1-204ENST00000561940 PYCR3Q53H96 274 aa2.88□□□□□ -1.95
SMG1-204ENST00000561940 MFSD8Q8NHS3 518 aa2.88□□□□□ -1.95
SMG1-204ENST00000561940 EBNA1BP2Q99848 306 aaKnown RBP2.88□□□□□ -1.95
SMG1-204ENST00000561940 NOSIPQ9Y314 301 aaKnown RBP2.88□□□□□ -1.95
SMG1-204ENST00000561940 WASHC3Q9Y3C0 194 aa2.88□□□□□ -1.95
SMG1-204ENST00000561940 BAZ2BQ9UIF8 2168 aaKnown RBP2.88□□□□□ -1.95
SMG1-204ENST00000561940 COL6A5A8TX70 2615 aa2.88□□□□□ -1.95
SMG1-204ENST00000561940 COL4A2P08572 1712 aa2.88□□□□□ -1.95
SMG1-204ENST00000561940 BOD1L1Q8NFC6 3051 aa2.87□□□□□ -1.95
SMG1-204ENST00000561940 NBPF19A0A087WUL8 3843 aa2.87□□□□□ -1.95
SMG1-204ENST00000561940 NOTCH1P46531 2555 aa2.87□□□□□ -1.95
SMG1-204ENST00000561940 UTP20O75691 2785 aaKnown RBP2.87□□□□□ -1.95
SMG1-204ENST00000561940 APCP25054 2843 aa2.87□□□□□ -1.95
SMG1-204ENST00000561940 KLRC4-KLRK1H3BQV0 150 aa2.87□□□□□ -1.95
SMG1-204ENST00000561940 PSCAO43653 123 aa2.87□□□□□ -1.95
SMG1-204ENST00000561940 TNFSF15O95150 251 aa2.87□□□□□ -1.95
SMG1-204ENST00000561940 CDS2O95674 445 aa2.87□□□□□ -1.95
SMG1-204ENST00000561940 EIF3IQ13347 325 aaKnown RBP2.87□□□□□ -1.95
SMG1-204ENST00000561940 ALX1Q15699 326 aa2.87□□□□□ -1.95
SMG1-204ENST00000561940 MAPK14Q16539 360 aa2.87□□□□□ -1.95
SMG1-204ENST00000561940 TBC1D28Q2M2D7 210 aa2.87□□□□□ -1.95
SMG1-204ENST00000561940 SMARCD3Q6STE5 483 aa2.87□□□□□ -1.95
SMG1-204ENST00000561940 FAM151BQ6UXP7 276 aa2.87□□□□□ -1.95
SMG1-204ENST00000561940 SCGB1D4Q6XE38 83 aa2.87□□□□□ -1.95
SMG1-204ENST00000561940 CMTM5Q96DZ9 223 aa2.87□□□□□ -1.95
SMG1-204ENST00000561940 GTSF1LQ9H1H1 148 aa2.87□□□□□ -1.95
SMG1-204ENST00000561940 BOLA2Q9H3K6 86 aa2.87□□□□□ -1.95
SMG1-204ENST00000561940 IMP3Q9NV31 184 aaKnown RBP2.87□□□□□ -1.95
SMG1-204ENST00000561940 FBN1P35555 2871 aaKnown RBP2.87□□□□□ -1.95
SMG1-204ENST00000561940 RTTNQ86VV8 2226 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms