RNA–Protein interactions for RNA: ENST00000561253.5

LRRC28-220, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-220ENST00000561253 IL1F10Q8WWZ1 152 aa4.7□□□□□ -1.66
LRRC28-220ENST00000561253 MRGPRFQ96AM1 343 aa4.7□□□□□ -1.66
LRRC28-220ENST00000561253 RBMXL1Q96E39 390 aaKnown RBP4.7□□□□□ -1.66
LRRC28-220ENST00000561253 ST6GALNAC5Q9BVH7 336 aa4.7□□□□□ -1.66
LRRC28-220ENST00000561253 CHIAQ9BZP6 476 aa4.7□□□□□ -1.66
LRRC28-220ENST00000561253 RAB9BQ9NP90 201 aa4.7□□□□□ -1.66
LRRC28-220ENST00000561253 BATF3Q9NR55 127 aa4.7□□□□□ -1.66
LRRC28-220ENST00000561253 RDH8Q9NYR8 311 aa4.7□□□□□ -1.66
LRRC28-220ENST00000561253 KLK11Q9UBX7 282 aa4.7□□□□□ -1.66
LRRC28-220ENST00000561253 TCF19Q9Y242 345 aa4.7□□□□□ -1.66
LRRC28-220ENST00000561253 POMT1Q9Y6A1 747 aa4.7□□□□□ -1.66
LRRC28-220ENST00000561253 PLXNB1O43157 2135 aa4.7□□□□□ -1.66
LRRC28-220ENST00000561253 IGHV1-3A0A0C4DH29 117 aa4.69□□□□□ -1.66
LRRC28-220ENST00000561253 PMS2P5A8MQ11 134 aa4.69□□□□□ -1.66
LRRC28-220ENST00000561253 LEUTXA8MZ59 168 aa4.69□□□□□ -1.66
LRRC28-220ENST00000561253 FAM25AB3EWG3 89 aa4.69□□□□□ -1.66
LRRC28-220ENST00000561253 FAM25CB3EWG5 89 aa4.69□□□□□ -1.66
LRRC28-220ENST00000561253 FAM25GB3EWG6 89 aa4.69□□□□□ -1.66
LRRC28-220ENST00000561253 ZNF736B4DX44 427 aaPredicted RBP4.69□□□□□ -1.66
LRRC28-220ENST00000561253 HSD17B6O14756 317 aa4.69□□□□□ -1.66
LRRC28-220ENST00000561253 BET1O15155 118 aa4.69□□□□□ -1.66
LRRC28-220ENST00000561253 CHST1O43916 411 aa4.69□□□□□ -1.66
LRRC28-220ENST00000561253 CTXN2P0C2S0 81 aa4.69□□□□□ -1.66
LRRC28-220ENST00000561253 ZNF735P0CB33 412 aa4.69□□□□□ -1.66
LRRC28-220ENST00000561253 SAA2P0DJI9 122 aaPredicted RBP4.69□□□□□ -1.66
LRRC28-220ENST00000561253 CT45A6P0DMU7 189 aa4.69□□□□□ -1.66
LRRC28-220ENST00000561253 CT45A5P0DMU8 189 aa4.69□□□□□ -1.66
LRRC28-220ENST00000561253 CT45A7P0DMV0 189 aa4.69□□□□□ -1.66
LRRC28-220ENST00000561253 OR5H8P0DN80 308 aa4.69□□□□□ -1.66
LRRC28-220ENST00000561253 NFYAP23511 347 aaPredicted RBP4.69□□□□□ -1.66
LRRC28-220ENST00000561253 PTBP1P26599 531 aaKnown RBP eCLIP4.69□□□□□ -1.66
LRRC28-220ENST00000561253 TALDO1P37837 337 aa4.69□□□□□ -1.66
LRRC28-220ENST00000561253 CEACAM6P40199 344 aa4.69□□□□□ -1.66
LRRC28-220ENST00000561253 RAB13P51153 203 aa4.69□□□□□ -1.66
LRRC28-220ENST00000561253 PRRX1P54821 245 aa4.69□□□□□ -1.66
LRRC28-220ENST00000561253 RIPPLY3P57055 190 aa4.69□□□□□ -1.66
LRRC28-220ENST00000561253 MRPS10P82664 201 aaKnown RBP4.69□□□□□ -1.66
LRRC28-220ENST00000561253 SSBP1Q04837 148 aaKnown RBP4.69□□□□□ -1.66
LRRC28-220ENST00000561253 SCGB2A2Q13296 93 aa4.69□□□□□ -1.66
LRRC28-220ENST00000561253 CDK10Q15131 360 aa4.69□□□□□ -1.66
LRRC28-220ENST00000561253 LRRC75BQ2VPJ9 315 aa4.69□□□□□ -1.66
LRRC28-220ENST00000561253 KRTAP24-1Q3LI83 254 aa4.69□□□□□ -1.66
LRRC28-220ENST00000561253 RPL39P5Q59GN2 51 aa4.69□□□□□ -1.66
LRRC28-220ENST00000561253 VAX1Q5SQQ9 334 aa4.69□□□□□ -1.66
LRRC28-220ENST00000561253 FAM71F2Q6NXP2 309 aa4.69□□□□□ -1.66
LRRC28-220ENST00000561253 DHRS11Q6UWP2 260 aa4.69□□□□□ -1.66
LRRC28-220ENST00000561253 LINC00299Q6ZSB3 139 aa4.69□□□□□ -1.66
LRRC28-220ENST00000561253 LHFPL1Q86WI0 220 aa4.69□□□□□ -1.66
LRRC28-220ENST00000561253 MMD2Q8IY49 270 aa4.69□□□□□ -1.66
LRRC28-220ENST00000561253 OR8H3Q8N146 312 aa4.69□□□□□ -1.66
LRRC28-220ENST00000561253 OR5AP2Q8NGF4 316 aa4.69□□□□□ -1.66
LRRC28-220ENST00000561253 OR4D10Q8NGI6 311 aa4.69□□□□□ -1.66
LRRC28-220ENST00000561253 ZNF418Q8TF45 676 aaPredicted RBP4.69□□□□□ -1.66
LRRC28-220ENST00000561253 GIMAP1Q8WWP7 306 aa4.69□□□□□ -1.66
LRRC28-220ENST00000561253 CREB3L1Q96BA8 519 aa4.69□□□□□ -1.66
LRRC28-220ENST00000561253 DIRAS2Q96HU8 199 aa4.69□□□□□ -1.66
LRRC28-220ENST00000561253 ABHD14BQ96IU4 210 aa4.69□□□□□ -1.66
LRRC28-220ENST00000561253 NABP2Q9BQ15 211 aa4.69□□□□□ -1.66
LRRC28-220ENST00000561253 MRPL20Q9BYC9 149 aaKnown RBP4.69□□□□□ -1.66
LRRC28-220ENST00000561253 SRRQ9GZT4 340 aa4.69□□□□□ -1.66
LRRC28-220ENST00000561253 PLSCR3Q9NRY6 295 aa4.69□□□□□ -1.66
LRRC28-220ENST00000561253 ZNF107Q9UII5 783 aaPredicted RBP4.69□□□□□ -1.66
LRRC28-220ENST00000561253 GAB2Q9UQC2 676 aa4.69□□□□□ -1.66
LRRC28-220ENST00000561253 WDR83OSQ9Y284 106 aa4.69□□□□□ -1.66
LRRC28-220ENST00000561253 MRPS7Q9Y2R9 242 aaKnown RBP4.69□□□□□ -1.66
LRRC28-220ENST00000561253 HILPDAQ9Y5L2 63 aa4.69□□□□□ -1.66
LRRC28-220ENST00000561253 TRAV34A0A0B4J273 112 aa4.68□□□□□ -1.66
LRRC28-220ENST00000561253 ANKRD20A5PA0PJZ0 165 aa4.68□□□□□ -1.66
LRRC28-220ENST00000561253 H3BUX3 64 aa4.68□□□□□ -1.66
LRRC28-220ENST00000561253 TOR1AO14656 332 aa4.68□□□□□ -1.66
LRRC28-220ENST00000561253 TCF21O43680 179 aa4.68□□□□□ -1.66
LRRC28-220ENST00000561253 CD3DP04234 171 aa4.68□□□□□ -1.66
LRRC28-220ENST00000561253 FCER2P06734 321 aa4.68□□□□□ -1.66
LRRC28-220ENST00000561253 OR8U9P0C7N5 309 aa4.68□□□□□ -1.66
LRRC28-220ENST00000561253 FRMD6-AS1P0C7T7 363 aa4.68□□□□□ -1.66
LRRC28-220ENST00000561253 TBPP20226 339 aa4.68□□□□□ -1.66
LRRC28-220ENST00000561253 AADACP22760 399 aa4.68□□□□□ -1.66
LRRC28-220ENST00000561253 CD24P25063 80 aa4.68□□□□□ -1.66
LRRC28-220ENST00000561253 HLA-DMAP28067 261 aa4.68□□□□□ -1.66
LRRC28-220ENST00000561253 RCVRNP35243 200 aa4.68□□□□□ -1.66
LRRC28-220ENST00000561253 HRH1P35367 487 aa4.68□□□□□ -1.66
LRRC28-220ENST00000561253 REG1BP48304 166 aa4.68□□□□□ -1.66
LRRC28-220ENST00000561253 RAB7AP51149 207 aa4.68□□□□□ -1.66
LRRC28-220ENST00000561253 DLK1P80370 383 aa4.68□□□□□ -1.66
LRRC28-220ENST00000561253 MRPS15P82914 257 aaKnown RBP4.68□□□□□ -1.66
LRRC28-220ENST00000561253 BAMBIQ13145 260 aa4.68□□□□□ -1.66
LRRC28-220ENST00000561253 MSMO1Q15800 293 aa4.68□□□□□ -1.66
LRRC28-220ENST00000561253 KIAA1644Q3SXP7 199 aa4.68□□□□□ -1.66
LRRC28-220ENST00000561253 AADACL3Q5VUY0 350 aa4.68□□□□□ -1.66
LRRC28-220ENST00000561253 Q8N2B8 174 aa4.68□□□□□ -1.66
LRRC28-220ENST00000561253 DRAM1Q8N682 238 aa4.68□□□□□ -1.66
LRRC28-220ENST00000561253 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.68□□□□□ -1.66
LRRC28-220ENST00000561253 OR10X1Q8NGY0 326 aa4.68□□□□□ -1.66
LRRC28-220ENST00000561253 OR8U1Q8NH10 309 aa4.68□□□□□ -1.66
LRRC28-220ENST00000561253 OR10J5Q8NHC4 309 aa4.68□□□□□ -1.66
LRRC28-220ENST00000561253 C15orf40Q8WUR7 153 aa4.68□□□□□ -1.66
LRRC28-220ENST00000561253 TAF15Q92804 592 aaKnown RBP eCLIP4.68□□□□□ -1.66
LRRC28-220ENST00000561253 SSX3Q99909 188 aa4.68□□□□□ -1.66
LRRC28-220ENST00000561253 FXYD6Q9H0Q3 95 aa4.68□□□□□ -1.66
LRRC28-220ENST00000561253 DNAJC4Q9NNZ3 241 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms