RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 C8orf59Q8N0T1 100 aaPredicted RBP13.62□□□□□ -0.23
TPM1-226ENST00000560959 PACRGLQ8N7B6 248 aa13.62□□□□□ -0.23
TPM1-226ENST00000560959 GVQW1Q8N7I0 195 aa13.62□□□□□ -0.23
TPM1-226ENST00000560959 BPIFB6Q8NFQ5 453 aa13.62□□□□□ -0.23
TPM1-226ENST00000560959 OR4A5Q8NH83 315 aa13.62□□□□□ -0.23
TPM1-226ENST00000560959 MAFIPQ8WZ33 124 aa13.62□□□□□ -0.23
TPM1-226ENST00000560959 ATP6V0BQ99437 205 aa13.62□□□□□ -0.23
TPM1-226ENST00000560959 SRSF8Q9BRL6 282 aaKnown RBP13.62□□□□□ -0.23
TPM1-226ENST00000560959 AIFM2Q9BRQ8 373 aa13.62□□□□□ -0.23
TPM1-226ENST00000560959 FBXL17Q9UF56 701 aa13.62□□□□□ -0.23
TPM1-226ENST00000560959 APLNQ9ULZ1 77 aa13.62□□□□□ -0.23
TPM1-226ENST00000560959 LSM2Q9Y333 95 aaKnown RBP13.62□□□□□ -0.23
TPM1-226ENST00000560959 C11orf94C9JXX5 98 aa13.61□□□□□ -0.23
TPM1-226ENST00000560959 K7EMT4 169 aa13.61□□□□□ -0.23
TPM1-226ENST00000560959 RAB27BO00194 218 aa13.61□□□□□ -0.23
TPM1-226ENST00000560959 HRASP01112 189 aa13.61□□□□□ -0.23
TPM1-226ENST00000560959 HIST1H1DP16402 221 aaKnown RBP13.61□□□□□ -0.23
TPM1-226ENST00000560959 GNB3P16520 340 aa13.61□□□□□ -0.23
TPM1-226ENST00000560959 TALDO1P37837 337 aa13.61□□□□□ -0.23
TPM1-226ENST00000560959 EIF4EBP1Q13541 118 aaPredicted RBP13.61□□□□□ -0.23
TPM1-226ENST00000560959 TRAM1Q15629 374 aa13.61□□□□□ -0.23
TPM1-226ENST00000560959 VN1R17PQ8TDU5 208 aa13.61□□□□□ -0.23
TPM1-226ENST00000560959 V9GY05 133 aa13.61□□□□□ -0.23
TPM1-226ENST00000560959 A0A1B0GVY2 172 aa13.6□□□□□ -0.23
TPM1-226ENST00000560959 CGB1A6NKQ9 187 aa13.6□□□□□ -0.23
TPM1-226ENST00000560959 TGOLN2O43493 480 aa13.6□□□□□ -0.23
TPM1-226ENST00000560959 S1PR2O95136 353 aa13.6□□□□□ -0.23
TPM1-226ENST00000560959 HLA-GP17693 338 aa13.6□□□□□ -0.23
TPM1-226ENST00000560959 DTYMKP23919 212 aa13.6□□□□□ -0.23
TPM1-226ENST00000560959 BRWD1-AS2P59051 145 aa13.6□□□□□ -0.23
TPM1-226ENST00000560959 UFD1Q92890 307 aa13.6□□□□□ -0.23
TPM1-226ENST00000560959 BET1LQ9NYM9 111 aa13.6□□□□□ -0.23
TPM1-226ENST00000560959 DNAH17Q9UFH2 4485 aa13.59□□□□□ -0.23
TPM1-226ENST00000560959 IGKV1D-8A0A087WSZ0 117 aa13.59□□□□□ -0.23
TPM1-226ENST00000560959 IGHV3-35A0A0C4DH35 117 aa13.59□□□□□ -0.23
TPM1-226ENST00000560959 NDUFA4O00483 81 aa13.59□□□□□ -0.23
TPM1-226ENST00000560959 REG1AP05451 166 aa13.59□□□□□ -0.23
TPM1-226ENST00000560959 CRHBPP24387 322 aa13.59□□□□□ -0.23
TPM1-226ENST00000560959 PSMA1P25786 263 aaKnown RBP13.59□□□□□ -0.23
TPM1-226ENST00000560959 MFAP2P55001 183 aa13.59□□□□□ -0.23
TPM1-226ENST00000560959 PLA2G7Q13093 441 aa13.59□□□□□ -0.23
TPM1-226ENST00000560959 ARL6IP1Q15041 203 aa13.59□□□□□ -0.23
TPM1-226ENST00000560959 OR2B11Q5JQS5 317 aa13.59□□□□□ -0.23
TPM1-226ENST00000560959 LIPKQ5VXJ0 399 aa13.59□□□□□ -0.23
TPM1-226ENST00000560959 SPSB3Q6PJ21 355 aa13.59□□□□□ -0.23
TPM1-226ENST00000560959 ZNF66Q6ZN08 573 aa13.59□□□□□ -0.23
TPM1-226ENST00000560959 MFSD4AQ8N468 514 aa13.59□□□□□ -0.23
TPM1-226ENST00000560959 OR11H2Q8NH07 326 aa13.59□□□□□ -0.23
TPM1-226ENST00000560959 OR5B3Q8NH48 314 aa13.59□□□□□ -0.23
TPM1-226ENST00000560959 CD300LFQ8TDQ1 290 aa13.59□□□□□ -0.23
TPM1-226ENST00000560959 TMEM203Q969S6 136 aa13.59□□□□□ -0.23
TPM1-226ENST00000560959 BSCL2Q96G97 398 aaPredicted RBP13.59□□□□□ -0.23
TPM1-226ENST00000560959 CYB5BO43169 146 aa13.58□□□□□ -0.24
TPM1-226ENST00000560959 FGF2P09038 288 aa13.58□□□□□ -0.24
TPM1-226ENST00000560959 GNAO1P09471 354 aa13.58□□□□□ -0.24
TPM1-226ENST00000560959 RAB6AP20340 208 aa13.58□□□□□ -0.24
TPM1-226ENST00000560959 OR2B8PP59922 312 aa13.58□□□□□ -0.24
TPM1-226ENST00000560959 TCTEX1D2Q8WW35 142 aa13.58□□□□□ -0.24
TPM1-226ENST00000560959 HRH4Q9H3N8 390 aa13.58□□□□□ -0.24
TPM1-226ENST00000560959 IGLL5B9A064 214 aa13.57□□□□□ -0.24
TPM1-226ENST00000560959 J3QRK9 145 aa13.57□□□□□ -0.24
TPM1-226ENST00000560959 CTSDP07339 412 aaPredicted RBP13.57□□□□□ -0.24
TPM1-226ENST00000560959 SSX9Q7RTT3 188 aa13.57□□□□□ -0.24
TPM1-226ENST00000560959 APRG1Q8IVJ8 170 aa13.57□□□□□ -0.24
TPM1-226ENST00000560959 DCSTAMPQ9H295 470 aa13.57□□□□□ -0.24
TPM1-226ENST00000560959 SPATA2Q9UM82 520 aa13.57□□□□□ -0.24
TPM1-226ENST00000560959 ETV7Q9Y603 341 aa13.57□□□□□ -0.24
TPM1-226ENST00000560959 IGLC7A0M8Q6 106 aa13.56□□□□□ -0.24
TPM1-226ENST00000560959 METTL21EPA6NDL7 271 aa13.56□□□□□ -0.24
TPM1-226ENST00000560959 C15orf62A8K5M9 175 aa13.56□□□□□ -0.24
TPM1-226ENST00000560959 RPA2P15927 270 aa13.56□□□□□ -0.24
TPM1-226ENST00000560959 NFYAP23511 347 aaPredicted RBP13.56□□□□□ -0.24
TPM1-226ENST00000560959 CALRP27797 417 aaKnown RBP13.56□□□□□ -0.24
TPM1-226ENST00000560959 A0A075B6Q4 140 aa13.55□□□□□ -0.24
TPM1-226ENST00000560959 IGKV1D-13A0A0B4J2D9 117 aa13.55□□□□□ -0.24
TPM1-226ENST00000560959 MRPS14O60783 128 aaKnown RBP13.55□□□□□ -0.24
TPM1-226ENST00000560959 IGKV1-13P0DP09 117 aa13.55□□□□□ -0.24
TPM1-226ENST00000560959 MSMO1Q15800 293 aa13.55□□□□□ -0.24
TPM1-226ENST00000560959 TIMM50Q3ZCQ8 353 aa13.55□□□□□ -0.24
TPM1-226ENST00000560959 HES5Q5TA89 166 aa13.55□□□□□ -0.24
TPM1-226ENST00000560959 THOC7Q6I9Y2 204 aaKnown RBP13.55□□□□□ -0.24
TPM1-226ENST00000560959 CNIH2Q6PI25 160 aa13.55□□□□□ -0.24
TPM1-226ENST00000560959 HSD17B13Q7Z5P4 300 aaPredicted RBP13.55□□□□□ -0.24
TPM1-226ENST00000560959 NR2C2APQ86WQ0 139 aa13.55□□□□□ -0.24
TPM1-226ENST00000560959 SMPXQ9UHP9 88 aa13.55□□□□□ -0.24
TPM1-226ENST00000560959 DYNC1H1Q14204 4646 aaKnown RBP13.55□□□□□ -0.24
TPM1-226ENST00000560959 ABCA13Q86UQ4 5058 aa13.54□□□□□ -0.24
TPM1-226ENST00000560959 OR2T8A6NH00 312 aa13.54□□□□□ -0.24
TPM1-226ENST00000560959 PTGES3LE9PB15 166 aa13.54□□□□□ -0.24
TPM1-226ENST00000560959 RBFOX2O43251 390 aaKnown RBP eCLIP13.54□□□□□ -0.24
TPM1-226ENST00000560959 RPS25P62851 125 aaKnown RBP13.54□□□□□ -0.24
TPM1-226ENST00000560959 POU2AF1Q16633 256 aa13.54□□□□□ -0.24
TPM1-226ENST00000560959 HRASLSQ9HDD0 168 aa13.54□□□□□ -0.24
TPM1-226ENST00000560959 DNAH11Q96DT5 4516 aa13.53□□□□□ -0.24
TPM1-226ENST00000560959 XRCC3O43542 346 aa13.53□□□□□ -0.24
TPM1-226ENST00000560959 TAS2R31P59538 309 aa13.53□□□□□ -0.24
TPM1-226ENST00000560959 TMEM187Q14656 261 aa13.53□□□□□ -0.24
TPM1-226ENST00000560959 GDPD1Q8N9F7 314 aa13.53□□□□□ -0.24
TPM1-226ENST00000560959 C20orf24Q9BUV8 137 aa13.53□□□□□ -0.24
TPM1-226ENST00000560959 QTRT1Q9BXR0 403 aaKnown RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms