RNA–Protein interactions for RNA: ENST00000560483.1

LRRC28-219, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-219ENST00000560483 PSMB8P28062 276 aa6.24□□□□□ -1.41
LRRC28-219ENST00000560483 SLC6A1P30531 599 aa6.24□□□□□ -1.41
LRRC28-219ENST00000560483 FAUP35544 74 aaKnown RBP6.24□□□□□ -1.41
LRRC28-219ENST00000560483 G6PCP35575 357 aa6.24□□□□□ -1.41
LRRC28-219ENST00000560483 MYCNOSP40205 109 aa6.24□□□□□ -1.41
LRRC28-219ENST00000560483 PIGPP57054 158 aa6.24□□□□□ -1.41
LRRC28-219ENST00000560483 TAS2R31P59538 309 aa6.24□□□□□ -1.41
LRRC28-219ENST00000560483 KRTAP10-2P60368 255 aa6.24□□□□□ -1.41
LRRC28-219ENST00000560483 RPL8P62917 257 aaKnown RBP6.24□□□□□ -1.41
LRRC28-219ENST00000560483 DEFA5Q01523 94 aa6.24□□□□□ -1.41
LRRC28-219ENST00000560483 SSBP1Q04837 148 aaKnown RBP6.24□□□□□ -1.41
LRRC28-219ENST00000560483 AKIRIN2Q53H80 203 aa6.24□□□□□ -1.41
LRRC28-219ENST00000560483 C10orf55Q5SWW7 151 aa6.24□□□□□ -1.41
LRRC28-219ENST00000560483 TRIQKQ629K1 86 aa6.24□□□□□ -1.41
LRRC28-219ENST00000560483 ZNF57Q68EA5 555 aaPredicted RBP6.24□□□□□ -1.41
LRRC28-219ENST00000560483 OR4A47Q6IF82 309 aa6.24□□□□□ -1.41
LRRC28-219ENST00000560483 Q8N402 240 aa6.24□□□□□ -1.41
LRRC28-219ENST00000560483 ARRDC1Q8N5I2 433 aa6.24□□□□□ -1.41
LRRC28-219ENST00000560483 OR4D10Q8NGI6 311 aa6.24□□□□□ -1.41
LRRC28-219ENST00000560483 OR1N2Q8NGR9 330 aa6.24□□□□□ -1.41
LRRC28-219ENST00000560483 ZFAND1Q8TCF1 268 aa6.24□□□□□ -1.41
LRRC28-219ENST00000560483 C4orf3Q8WVX3 66 aa6.24□□□□□ -1.41
LRRC28-219ENST00000560483 TMEM68Q96MH6 324 aa6.24□□□□□ -1.41
LRRC28-219ENST00000560483 ALX4Q9H161 411 aaPredicted RBP6.24□□□□□ -1.41
LRRC28-219ENST00000560483 SLA2Q9H6Q3 261 aa6.24□□□□□ -1.41
LRRC28-219ENST00000560483 GNB4Q9HAV0 340 aa6.24□□□□□ -1.41
LRRC28-219ENST00000560483 SLC2A9Q9NRM0 540 aa6.24□□□□□ -1.41
LRRC28-219ENST00000560483 TMEM140Q9NV12 185 aa6.24□□□□□ -1.41
LRRC28-219ENST00000560483 SCP2D1Q9UJQ7 156 aa6.24□□□□□ -1.41
LRRC28-219ENST00000560483 NUBP2Q9Y5Y2 271 aa6.24□□□□□ -1.41
LRRC28-219ENST00000560483 NBEAL1Q6ZS30 2694 aa6.24□□□□□ -1.41
LRRC28-219ENST00000560483 NOTCH3Q9UM47 2321 aa6.24□□□□□ -1.41
LRRC28-219ENST00000560483 TNCP24821 2201 aa6.23□□□□□ -1.41
LRRC28-219ENST00000560483 PKD1L1Q8TDX9 2849 aa6.23□□□□□ -1.41
LRRC28-219ENST00000560483 A0A0G2JLM5 398 aa6.23□□□□□ -1.41
LRRC28-219ENST00000560483 HMX3A6NHT5 357 aa6.23□□□□□ -1.41
LRRC28-219ENST00000560483 MARCH11A6NNE9 402 aa6.23□□□□□ -1.41
LRRC28-219ENST00000560483 ZNF701M0R085 212 aaPredicted RBP6.23□□□□□ -1.41
LRRC28-219ENST00000560483 DHFRP00374 187 aa6.23□□□□□ -1.41
LRRC28-219ENST00000560483 PRH1P02810 166 aa6.23□□□□□ -1.41
LRRC28-219ENST00000560483 REG1AP05451 166 aa6.23□□□□□ -1.41
LRRC28-219ENST00000560483 CRYGBP07316 175 aa6.23□□□□□ -1.41
LRRC28-219ENST00000560483 OR9G9P0C7N8 305 aa6.23□□□□□ -1.41
LRRC28-219ENST00000560483 HLA-GP17693 338 aa6.23□□□□□ -1.41
LRRC28-219ENST00000560483 PPIFP30405 207 aaKnown RBP6.23□□□□□ -1.41
LRRC28-219ENST00000560483 CDX1P47902 265 aaPredicted RBP6.23□□□□□ -1.41
LRRC28-219ENST00000560483 AKR1C2P52895 323 aa6.23□□□□□ -1.41
LRRC28-219ENST00000560483 AP3S2P59780 193 aa6.23□□□□□ -1.41
LRRC28-219ENST00000560483 CFHR3Q02985 330 aa6.23□□□□□ -1.41
LRRC28-219ENST00000560483 H2BFWTQ7Z2G1 175 aa6.23□□□□□ -1.41
LRRC28-219ENST00000560483 SLC25A42Q86VD7 318 aa6.23□□□□□ -1.41
LRRC28-219ENST00000560483 MRPL41Q8IXM3 137 aaKnown RBP6.23□□□□□ -1.41
LRRC28-219ENST00000560483 TOMM5Q8N4H5 51 aa6.23□□□□□ -1.41
LRRC28-219ENST00000560483 ZNF491Q8N8L2 437 aa6.23□□□□□ -1.41
LRRC28-219ENST00000560483 MINDY2Q8NBR6 621 aa6.23□□□□□ -1.41
LRRC28-219ENST00000560483 OR4C16Q8NGL9 310 aa6.23□□□□□ -1.41
LRRC28-219ENST00000560483 OR4A16Q8NH70 328 aa6.23□□□□□ -1.41
LRRC28-219ENST00000560483 OR4A5Q8NH83 315 aa6.23□□□□□ -1.41
LRRC28-219ENST00000560483 TERB2Q8NHR7 220 aa6.23□□□□□ -1.41
LRRC28-219ENST00000560483 MARCH1Q8TCQ1 289 aa6.23□□□□□ -1.41
LRRC28-219ENST00000560483 RCC1LQ96I51 464 aaKnown RBP6.23□□□□□ -1.41
LRRC28-219ENST00000560483 RAX2Q96IS3 184 aa6.23□□□□□ -1.41
LRRC28-219ENST00000560483 UBE2E2Q96LR5 201 aa6.23□□□□□ -1.41
LRRC28-219ENST00000560483 PRRT1Q99946 306 aa6.23□□□□□ -1.41
LRRC28-219ENST00000560483 THAP7Q9BT49 309 aaPredicted RBP6.23□□□□□ -1.41
LRRC28-219ENST00000560483 MCRIP2Q9BUT9 160 aaKnown RBP6.23□□□□□ -1.41
LRRC28-219ENST00000560483 RSRP1Q9BUV0 290 aa6.23□□□□□ -1.41
LRRC28-219ENST00000560483 PLEKHA2Q9HB19 425 aa6.23□□□□□ -1.41
LRRC28-219ENST00000560483 COMMD9Q9P000 198 aa6.23□□□□□ -1.41
LRRC28-219ENST00000560483 NDUFA13Q9P0J0 144 aa6.23□□□□□ -1.41
LRRC28-219ENST00000560483 ZNF580Q9UK33 172 aa6.23□□□□□ -1.41
LRRC28-219ENST00000560483 LINC00854A0A1B0GVQ3 168 aa6.22□□□□□ -1.41
LRRC28-219ENST00000560483 LINC01619G3V211 115 aa6.22□□□□□ -1.41
LRRC28-219ENST00000560483 CTDSPLO15194 276 aa6.22□□□□□ -1.41
LRRC28-219ENST00000560483 RBFOX2O43251 390 aaKnown RBP eCLIP6.22□□□□□ -1.41
LRRC28-219ENST00000560483 SOX15O60248 233 aa6.22□□□□□ -1.41
LRRC28-219ENST00000560483 EIF4EBP3O60516 100 aaPredicted RBP6.22□□□□□ -1.41
LRRC28-219ENST00000560483 ATG12O94817 140 aa6.22□□□□□ -1.41
LRRC28-219ENST00000560483 PRB2P02812 416 aaPredicted RBP6.22□□□□□ -1.41
LRRC28-219ENST00000560483 OR8U8P0C7N1 319 aa6.22□□□□□ -1.41
LRRC28-219ENST00000560483 EGR2P11161 476 aaPredicted RBP6.22□□□□□ -1.41
LRRC28-219ENST00000560483 MYOD1P15172 320 aa6.22□□□□□ -1.41
LRRC28-219ENST00000560483 HOXA5P20719 270 aa6.22□□□□□ -1.41
LRRC28-219ENST00000560483 MAS1LP35410 378 aa6.22□□□□□ -1.41
LRRC28-219ENST00000560483 ECI1P42126 302 aa6.22□□□□□ -1.41
LRRC28-219ENST00000560483 OR2B8PP59922 312 aa6.22□□□□□ -1.41
LRRC28-219ENST00000560483 ATP5G2Q06055 141 aa6.22□□□□□ -1.41
LRRC28-219ENST00000560483 ZNF616Q08AN1 781 aa6.22□□□□□ -1.41
LRRC28-219ENST00000560483 EIF4EBP1Q13541 118 aaPredicted RBP6.22□□□□□ -1.41
LRRC28-219ENST00000560483 C4orf46Q504U0 113 aa6.22□□□□□ -1.41
LRRC28-219ENST00000560483 OR51S1Q8NGJ8 323 aa6.22□□□□□ -1.41
LRRC28-219ENST00000560483 OR13C8Q8NGS7 320 aa6.22□□□□□ -1.41
LRRC28-219ENST00000560483 TMEM167AQ8TBQ9 72 aa6.22□□□□□ -1.41
LRRC28-219ENST00000560483 ZNF486Q96H40 463 aaPredicted RBP6.22□□□□□ -1.41
LRRC28-219ENST00000560483 SCGB3A2Q96PL1 93 aa6.22□□□□□ -1.41
LRRC28-219ENST00000560483 PDCD10Q9BUL8 212 aa6.22□□□□□ -1.41
LRRC28-219ENST00000560483 GPR61Q9BZJ8 451 aa6.22□□□□□ -1.41
LRRC28-219ENST00000560483 NXF2Q9GZY0 626 aaKnown RBP6.22□□□□□ -1.41
LRRC28-219ENST00000560483 BET1LQ9NYM9 111 aa6.22□□□□□ -1.41
LRRC28-219ENST00000560483 NSG2Q9Y328 171 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms