RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 SCAF4O95104 1147 aaKnown RBP9.77□□□□□ -0.85
TPM1-220ENST00000559556 C8orf88P0DMB2 117 aa9.77□□□□□ -0.85
TPM1-220ENST00000559556 MSMO1Q15800 293 aa9.77□□□□□ -0.85
TPM1-220ENST00000559556 TIMM50Q3ZCQ8 353 aa9.77□□□□□ -0.85
TPM1-220ENST00000559556 C22orf42Q6IC83 251 aa9.77□□□□□ -0.85
TPM1-220ENST00000559556 BTNL8Q6UX41 500 aa9.77□□□□□ -0.85
TPM1-220ENST00000559556 WFDC3Q8IUB2 231 aa9.77□□□□□ -0.85
TPM1-220ENST00000559556 MFSD4AQ8N468 514 aa9.77□□□□□ -0.85
TPM1-220ENST00000559556 MARC2Q969Z3 335 aa9.77□□□□□ -0.85
TPM1-220ENST00000559556 CXorf58Q96LI9 332 aa9.77□□□□□ -0.85
TPM1-220ENST00000559556 ANXA10Q9UJ72 324 aa9.77□□□□□ -0.85
TPM1-220ENST00000559556 SMIM30A4D0T7 59 aa9.76□□□□□ -0.85
TPM1-220ENST00000559556 REG1AP05451 166 aa9.76□□□□□ -0.85
TPM1-220ENST00000559556 MYOD1P15172 320 aa9.76□□□□□ -0.85
TPM1-220ENST00000559556 HLA-GP17693 338 aa9.76□□□□□ -0.85
TPM1-220ENST00000559556 ELLP55199 621 aaPredicted RBP9.76□□□□□ -0.85
TPM1-220ENST00000559556 GNG2P59768 71 aa9.76□□□□□ -0.85
TPM1-220ENST00000559556 TM4SF20Q53R12 229 aa9.76□□□□□ -0.85
TPM1-220ENST00000559556 UNQ9165/PRO28630Q6UXU0 137 aa9.76□□□□□ -0.85
TPM1-220ENST00000559556 SSX9Q7RTT3 188 aa9.76□□□□□ -0.85
TPM1-220ENST00000559556 OR4A5Q8NH83 315 aa9.76□□□□□ -0.85
TPM1-220ENST00000559556 GPHA2Q96T91 129 aa9.76□□□□□ -0.85
TPM1-220ENST00000559556 TP53TG1Q9Y2A0 90 aa9.76□□□□□ -0.85
TPM1-220ENST00000559556 A0A087WXM4 84 aa9.75□□□□□ -0.85
TPM1-220ENST00000559556 IGLC7A0M8Q6 106 aa9.75□□□□□ -0.85
TPM1-220ENST00000559556 NUPR2A6NF83 97 aa9.75□□□□□ -0.85
TPM1-220ENST00000559556 NOTOA8MTQ0 251 aa9.75□□□□□ -0.85
TPM1-220ENST00000559556 RBFOX2O43251 390 aaKnown RBP eCLIP9.75□□□□□ -0.85
TPM1-220ENST00000559556 FGF2P09038 288 aa9.75□□□□□ -0.85
TPM1-220ENST00000559556 DEFA4P12838 97 aa9.75□□□□□ -0.85
TPM1-220ENST00000559556 FGF9P31371 208 aaPredicted RBP9.75□□□□□ -0.85
TPM1-220ENST00000559556 OR2B8PP59922 312 aa9.75□□□□□ -0.85
TPM1-220ENST00000559556 TNFRSF9Q07011 255 aa9.75□□□□□ -0.85
TPM1-220ENST00000559556 POU2AF1Q16633 256 aa9.75□□□□□ -0.85
TPM1-220ENST00000559556 Q6ZWC4 215 aa9.75□□□□□ -0.85
TPM1-220ENST00000559556 OR1L6Q8NGR2 347 aa9.75□□□□□ -0.85
TPM1-220ENST00000559556 ZNF502Q8TBZ5 544 aa9.75□□□□□ -0.85
TPM1-220ENST00000559556 AIFM2Q9BRQ8 373 aa9.75□□□□□ -0.85
TPM1-220ENST00000559556 ZNF436Q9C0F3 470 aaPredicted RBP9.75□□□□□ -0.85
TPM1-220ENST00000559556 VCX3AQ9NNX9 186 aa9.75□□□□□ -0.85
TPM1-220ENST00000559556 MRPL27Q9P0M9 148 aaKnown RBP9.75□□□□□ -0.85
TPM1-220ENST00000559556 A0A0J9YWU9 116 aa9.74□□□□□ -0.85
TPM1-220ENST00000559556 CXorf65A6NEN9 183 aa9.74□□□□□ -0.85
TPM1-220ENST00000559556 CLEC3BP05452 202 aa9.74□□□□□ -0.85
TPM1-220ENST00000559556 GPR183P32249 361 aa9.74□□□□□ -0.85
TPM1-220ENST00000559556 TAS2R31P59538 309 aa9.74□□□□□ -0.85
TPM1-220ENST00000559556 EWSR1Q01844 656 aaKnown RBP eCLIP9.74□□□□□ -0.85
TPM1-220ENST00000559556 PMS2P11Q13670 270 aa9.74□□□□□ -0.85
TPM1-220ENST00000559556 RBPMS2Q6ZRY4 209 aaKnown RBP9.74□□□□□ -0.85
TPM1-220ENST00000559556 SPAG16Q8N0X2 631 aa9.74□□□□□ -0.85
TPM1-220ENST00000559556 OR2C3Q8N628 320 aa9.74□□□□□ -0.85
TPM1-220ENST00000559556 TSPAN14Q8NG11 270 aa9.74□□□□□ -0.85
TPM1-220ENST00000559556 OR13F1Q8NGS4 319 aa9.74□□□□□ -0.85
TPM1-220ENST00000559556 LGALS14Q8TCE9 139 aa9.74□□□□□ -0.85
TPM1-220ENST00000559556 SECTM1Q8WVN6 248 aa9.74□□□□□ -0.85
TPM1-220ENST00000559556 SPAG8Q99932 426 aaPredicted RBP9.74□□□□□ -0.85
TPM1-220ENST00000559556 SRSF8Q9BRL6 282 aaKnown RBP9.74□□□□□ -0.85
TPM1-220ENST00000559556 C5orf66Q9H5L9 145 aa9.74□□□□□ -0.85
TPM1-220ENST00000559556 TXNL4BQ9NX01 149 aaKnown RBP9.74□□□□□ -0.85
TPM1-220ENST00000559556 UFC1Q9Y3C8 167 aa9.74□□□□□ -0.85
TPM1-220ENST00000559556 PKHD1P08F94 4074 aa9.74□□□□□ -0.85
TPM1-220ENST00000559556 TNFSF12O43508 249 aa9.73□□□□□ -0.85
TPM1-220ENST00000559556 LY6G6CO95867 125 aa9.73□□□□□ -0.85
TPM1-220ENST00000559556 ATF4P18848 351 aaPredicted RBP9.73□□□□□ -0.85
TPM1-220ENST00000559556 BMI1P35226 326 aa9.73□□□□□ -0.85
TPM1-220ENST00000559556 APOC4P55056 127 aa9.73□□□□□ -0.85
TPM1-220ENST00000559556 ARPC4P59998 168 aa9.73□□□□□ -0.85
TPM1-220ENST00000559556 DEFB135Q30KP9 77 aa9.73□□□□□ -0.85
TPM1-220ENST00000559556 ZNF585BQ52M93 769 aa9.73□□□□□ -0.85
TPM1-220ENST00000559556 ZNF773Q6PK81 442 aa9.73□□□□□ -0.85
TPM1-220ENST00000559556 LYG2Q86SG7 212 aa9.73□□□□□ -0.85
TPM1-220ENST00000559556 TPRA1Q86W33 373 aa9.73□□□□□ -0.85
TPM1-220ENST00000559556 ZBTB34Q8NCN2 500 aa9.73□□□□□ -0.85
TPM1-220ENST00000559556 BEST4Q8NFU0 473 aa9.73□□□□□ -0.85
TPM1-220ENST00000559556 TMEM190Q8WZ59 177 aa9.73□□□□□ -0.85
TPM1-220ENST00000559556 HRASLSQ9HDD0 168 aa9.73□□□□□ -0.85
TPM1-220ENST00000559556 CCL28Q9NRJ3 127 aa9.73□□□□□ -0.85
TPM1-220ENST00000559556 RHBDL2Q9NX52 303 aa9.73□□□□□ -0.85
TPM1-220ENST00000559556 THYN1Q9P016 225 aa9.73□□□□□ -0.85
TPM1-220ENST00000559556 DAPK2Q9UIK4 370 aa9.73□□□□□ -0.85
TPM1-220ENST00000559556 MUC4Q99102 2169 aa9.73□□□□□ -0.85
TPM1-220ENST00000559556 TRAV3A0A0B4J244 114 aa9.72□□□□□ -0.85
TPM1-220ENST00000559556 IGHV3-35A0A0C4DH35 117 aa9.72□□□□□ -0.85
TPM1-220ENST00000559556 KIR2DL5BA0A0G2JN68 375 aa9.72□□□□□ -0.85
TPM1-220ENST00000559556 KIR2DL5BA0A0G2JPC4 375 aa9.72□□□□□ -0.85
TPM1-220ENST00000559556 UBE2CO00762 179 aa9.72□□□□□ -0.85
TPM1-220ENST00000559556 TSPAN4O14817 238 aa9.72□□□□□ -0.85
TPM1-220ENST00000559556 TGOLN2O43493 480 aa9.72□□□□□ -0.85
TPM1-220ENST00000559556 SPRY2O43597 315 aa9.72□□□□□ -0.85
TPM1-220ENST00000559556 PPYP01298 95 aa9.72□□□□□ -0.85
TPM1-220ENST00000559556 NQO2P16083 231 aa9.72□□□□□ -0.85
TPM1-220ENST00000559556 PTBP1P26599 531 aaKnown RBP eCLIP9.72□□□□□ -0.855e-7■■■□□ 15.6
TPM1-220ENST00000559556 FCGR2CP31995 323 aa9.72□□□□□ -0.85
TPM1-220ENST00000559556 CATR1Q13166 79 aa9.72□□□□□ -0.85
TPM1-220ENST00000559556 ODF3L2Q3SX64 289 aa9.72□□□□□ -0.85
TPM1-220ENST00000559556 UBE2UQ5VVX9 321 aa9.72□□□□□ -0.85
TPM1-220ENST00000559556 THOC7Q6I9Y2 204 aaKnown RBP9.72□□□□□ -0.85
TPM1-220ENST00000559556 SFXN4Q6P4A7 337 aa9.72□□□□□ -0.85
TPM1-220ENST00000559556 PLET1Q6UQ28 207 aa9.72□□□□□ -0.85
TPM1-220ENST00000559556 SLC38A6Q8IZM9 456 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms