RNA–Protein interactions for RNA: ENST00000558218.5

USP3-207, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-207ENST00000558218 THOC7Q6I9Y2 204 aaKnown RBP7.72□□□□□ -1.17
USP3-207ENST00000558218 OR4A47Q6IF82 309 aa7.72□□□□□ -1.17
USP3-207ENST00000558218 IL34Q6ZMJ4 242 aa7.72□□□□□ -1.17
USP3-207ENST00000558218 HSD17B13Q7Z5P4 300 aaPredicted RBP7.72□□□□□ -1.17
USP3-207ENST00000558218 CMTM1Q8IZ96 169 aa7.72□□□□□ -1.17
USP3-207ENST00000558218 VKORC1L1Q8N0U8 176 aa7.72□□□□□ -1.17
USP3-207ENST00000558218 OR2K2Q8NGT1 345 aa7.72□□□□□ -1.17
USP3-207ENST00000558218 OR6F1Q8NGZ6 308 aa7.72□□□□□ -1.17
USP3-207ENST00000558218 MOB3AQ96BX8 217 aa7.72□□□□□ -1.17
USP3-207ENST00000558218 FYTTD1Q96QD9 318 aaKnown RBP7.72□□□□□ -1.17
USP3-207ENST00000558218 FUNDC2Q9BWH2 189 aa7.72□□□□□ -1.17
USP3-207ENST00000558218 FAM212BQ9NTI7 297 aaPredicted RBP7.72□□□□□ -1.17
USP3-207ENST00000558218 LGALS9O00182 355 aa7.71□□□□□ -1.18
USP3-207ENST00000558218 UPK2O00526 184 aa7.71□□□□□ -1.18
USP3-207ENST00000558218 CSN3P07498 182 aa7.71□□□□□ -1.18
USP3-207ENST00000558218 APELAP0DMC3 54 aa7.71□□□□□ -1.18
USP3-207ENST00000558218 PTHLHP12272 177 aa7.71□□□□□ -1.18
USP3-207ENST00000558218 CTRB1P17538 263 aa7.71□□□□□ -1.18
USP3-207ENST00000558218 F2RP25116 425 aa7.71□□□□□ -1.18
USP3-207ENST00000558218 PSMB6P28072 239 aa7.71□□□□□ -1.18
USP3-207ENST00000558218 RFX2P48378 723 aa7.71□□□□□ -1.18
USP3-207ENST00000558218 SYNJ2BPP57105 145 aa7.71□□□□□ -1.18
USP3-207ENST00000558218 FXYD4P59646 89 aa7.71□□□□□ -1.18
USP3-207ENST00000558218 LSM3P62310 102 aaKnown RBP7.71□□□□□ -1.18
USP3-207ENST00000558218 C15orf32Q32M92 178 aa7.71□□□□□ -1.18
USP3-207ENST00000558218 CTRB2Q6GPI1 263 aa7.71□□□□□ -1.18
USP3-207ENST00000558218 LCN12Q6JVE5 192 aa7.71□□□□□ -1.18
USP3-207ENST00000558218 MZT2AQ6P582 158 aa7.71□□□□□ -1.18
USP3-207ENST00000558218 ZNF818PQ6ZRF7 136 aa7.71□□□□□ -1.18
USP3-207ENST00000558218 GPHB5Q86YW7 130 aa7.71□□□□□ -1.18
USP3-207ENST00000558218 LYSMD2Q8IV50 215 aa7.71□□□□□ -1.18
USP3-207ENST00000558218 Q8N402 240 aa7.71□□□□□ -1.18
USP3-207ENST00000558218 OR5H2Q8NGV7 314 aa7.71□□□□□ -1.18
USP3-207ENST00000558218 GPX8Q8TED1 209 aa7.71□□□□□ -1.18
USP3-207ENST00000558218 C15orf40Q8WUR7 153 aa7.71□□□□□ -1.18
USP3-207ENST00000558218 CXorf58Q96LI9 332 aa7.71□□□□□ -1.18
USP3-207ENST00000558218 COMMD5Q9GZQ3 224 aa7.71□□□□□ -1.18
USP3-207ENST00000558218 HRASLSQ9HDD0 168 aa7.71□□□□□ -1.18
USP3-207ENST00000558218 EHFQ9NZC4 300 aa7.71□□□□□ -1.18
USP3-207ENST00000558218 COMMD9Q9P000 198 aa7.71□□□□□ -1.18
USP3-207ENST00000558218 THYN1Q9P016 225 aa7.71□□□□□ -1.18
USP3-207ENST00000558218 COL7A1Q02388 2944 aa7.71□□□□□ -1.18
USP3-207ENST00000558218 TRBV7-1A0A0A6YYK4 115 aa7.7□□□□□ -1.18
USP3-207ENST00000558218 KRTAP4-8A0A0G2JLE6 195 aa7.7□□□□□ -1.18
USP3-207ENST00000558218 E7EUB6 86 aa7.7□□□□□ -1.18
USP3-207ENST00000558218 CYB5BO43169 146 aa7.7□□□□□ -1.18
USP3-207ENST00000558218 TNFSF12O43508 249 aa7.7□□□□□ -1.18
USP3-207ENST00000558218 GGCTO75223 188 aaKnown RBP7.7□□□□□ -1.18
USP3-207ENST00000558218 RBMXL2O75526 392 aaKnown RBP7.7□□□□□ -1.18
USP3-207ENST00000558218 PGLYRP1O75594 196 aaPredicted RBP7.7□□□□□ -1.18
USP3-207ENST00000558218 S100GP29377 79 aa7.7□□□□□ -1.18
USP3-207ENST00000558218 TGFBR1P36897 503 aa7.7□□□□□ -1.18
USP3-207ENST00000558218 OR2B8PP59922 312 aa7.7□□□□□ -1.18
USP3-207ENST00000558218 EXOSC2Q13868 293 aaKnown RBP7.7□□□□□ -1.18
USP3-207ENST00000558218 C10orf55Q5SWW7 151 aa7.7□□□□□ -1.18
USP3-207ENST00000558218 AADACL3Q5VUY0 350 aa7.7□□□□□ -1.18
USP3-207ENST00000558218 LAX1Q8IWV1 398 aa7.7□□□□□ -1.18
USP3-207ENST00000558218 Q8N1Y9 231 aa7.7□□□□□ -1.18
USP3-207ENST00000558218 AP3S1Q92572 193 aa7.7□□□□□ -1.18
USP3-207ENST00000558218 ZNF2Q9BSG1 426 aaPredicted RBP7.7□□□□□ -1.18
USP3-207ENST00000558218 RSRP1Q9BUV0 290 aa7.7□□□□□ -1.18
USP3-207ENST00000558218 FKBP11Q9NYL4 201 aa7.7□□□□□ -1.18
USP3-207ENST00000558218 COMMD3Q9UBI1 195 aa7.7□□□□□ -1.18
USP3-207ENST00000558218 FBXL7Q9UJT9 491 aa7.7□□□□□ -1.18
USP3-207ENST00000558218 DMRT1Q9Y5R6 373 aa7.7□□□□□ -1.18
USP3-207ENST00000558218 MEIS3P1A6NDR6 274 aa7.69□□□□□ -1.18
USP3-207ENST00000558218 HMX3A6NHT5 357 aa7.69□□□□□ -1.18
USP3-207ENST00000558218 BMPR1BO00238 502 aa7.69□□□□□ -1.18
USP3-207ENST00000558218 GPR31O00270 319 aa7.69□□□□□ -1.18
USP3-207ENST00000558218 OR2J3O76001 311 aa7.69□□□□□ -1.18
USP3-207ENST00000558218 TRBV12-3P01733 135 aa7.69□□□□□ -1.18
USP3-207ENST00000558218 PMP2P02689 132 aa7.69□□□□□ -1.18
USP3-207ENST00000558218 PRH1P02810 166 aa7.69□□□□□ -1.18
USP3-207ENST00000558218 FRMD6-AS1P0C7T7 363 aa7.69□□□□□ -1.18
USP3-207ENST00000558218 DEFA4P12838 97 aa7.69□□□□□ -1.18
USP3-207ENST00000558218 UCP3P55916 312 aa7.69□□□□□ -1.18
USP3-207ENST00000558218 ERVK-16P61578 105 aa7.69□□□□□ -1.18
USP3-207ENST00000558218 VBP1P61758 197 aa7.69□□□□□ -1.18
USP3-207ENST00000558218 NCS1P62166 190 aa7.69□□□□□ -1.18
USP3-207ENST00000558218 SSX9Q7RTT3 188 aa7.69□□□□□ -1.18
USP3-207ENST00000558218 TMEM17Q86X19 198 aa7.69□□□□□ -1.18
USP3-207ENST00000558218 SBSPONQ8IVN8 264 aa7.69□□□□□ -1.18
USP3-207ENST00000558218 SGPP2Q8IWX5 399 aa7.69□□□□□ -1.18
USP3-207ENST00000558218 DMBX1Q8NFW5 382 aa7.69□□□□□ -1.18
USP3-207ENST00000558218 EEF1AKMT3Q96AZ1 226 aa7.69□□□□□ -1.18
USP3-207ENST00000558218 DGCR14Q96DF8 476 aaKnown RBP7.69□□□□□ -1.18
USP3-207ENST00000558218 GPHA2Q96T91 129 aa7.69□□□□□ -1.18
USP3-207ENST00000558218 ATP6V0BQ99437 205 aa7.69□□□□□ -1.18
USP3-207ENST00000558218 ZMAT4Q9H898 229 aa7.69□□□□□ -1.18
USP3-207ENST00000558218 C19orf73Q9NVV2 129 aa7.69□□□□□ -1.18
USP3-207ENST00000558218 TECRQ9NZ01 308 aaKnown RBP7.69□□□□□ -1.18
USP3-207ENST00000558218 IGLV11-55A0A075B6I3 123 aa7.68□□□□□ -1.18
USP3-207ENST00000558218 A0A1B0GW64 132 aa7.68□□□□□ -1.18
USP3-207ENST00000558218 C3orf84H3BNL1 204 aa7.68□□□□□ -1.18
USP3-207ENST00000558218 EIF4EP06730 217 aaKnown RBP7.68□□□□□ -1.18
USP3-207ENST00000558218 FCER2P06734 321 aa7.68□□□□□ -1.18
USP3-207ENST00000558218 AREGP15514 252 aa7.68□□□□□ -1.18
USP3-207ENST00000558218 ZNF182P17025 639 aaPredicted RBP7.68□□□□□ -1.18
USP3-207ENST00000558218 RCVRNP35243 200 aa7.68□□□□□ -1.18
USP3-207ENST00000558218 HRH1P35367 487 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms