RNA–Protein interactions for RNA: ENST00000558026.1

IGKV2D-28-202, Transcript of immunoglobulin kappa variable 2D-28, humanhuman

BASIC

Gene IGKV2D-28, Length 306 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV2D-28-202ENST00000558026 CD36P16671 472 aa6.72□□□□□ -1.33
IGKV2D-28-202ENST00000558026 FGF9P31371 208 aaPredicted RBP6.72□□□□□ -1.33
IGKV2D-28-202ENST00000558026 ATP6V1E1P36543 226 aa6.72□□□□□ -1.33
IGKV2D-28-202ENST00000558026 CCR9P51686 369 aa6.72□□□□□ -1.33
IGKV2D-28-202ENST00000558026 CMC4P56277 68 aaPredicted RBP6.72□□□□□ -1.33
IGKV2D-28-202ENST00000558026 CDPF1Q6NVV7 123 aa6.72□□□□□ -1.33
IGKV2D-28-202ENST00000558026 STHQ8IWL8 128 aa6.72□□□□□ -1.33
IGKV2D-28-202ENST00000558026 MRPL30Q8TCC3 161 aaKnown RBP6.72□□□□□ -1.33
IGKV2D-28-202ENST00000558026 SMIM19Q96E16 107 aa6.72□□□□□ -1.33
IGKV2D-28-202ENST00000558026 C20orf24Q9BUV8 137 aa6.72□□□□□ -1.33
IGKV2D-28-202ENST00000558026 ZNF436Q9C0F3 470 aaPredicted RBP6.72□□□□□ -1.33
IGKV2D-28-202ENST00000558026 RSL24D1Q9UHA3 163 aaKnown RBP6.72□□□□□ -1.33
IGKV2D-28-202ENST00000558026 STEAP1Q9UHE8 339 aa6.72□□□□□ -1.33
IGKV2D-28-202ENST00000558026 ZNF257Q9Y2Q1 563 aa6.72□□□□□ -1.33
IGKV2D-28-202ENST00000558026 LINC00588Q9Y4M8 146 aa6.72□□□□□ -1.33
IGKV2D-28-202ENST00000558026 PEX16Q9Y5Y5 336 aa6.72□□□□□ -1.33
IGKV2D-28-202ENST00000558026 TRBV5-7A0A0A0MS05 114 aa6.71□□□□□ -1.34
IGKV2D-28-202ENST00000558026 TRDV1A0A1B0GX56 115 aa6.71□□□□□ -1.34
IGKV2D-28-202ENST00000558026 OR4C45A6NMZ5 311 aa6.71□□□□□ -1.34
IGKV2D-28-202ENST00000558026 GPX5O75715 221 aa6.71□□□□□ -1.34
IGKV2D-28-202ENST00000558026 OXTP01178 125 aa6.71□□□□□ -1.34
IGKV2D-28-202ENST00000558026 PLA2G1BP04054 148 aaKnown RBP6.71□□□□□ -1.34
IGKV2D-28-202ENST00000558026 PSMA1P25786 263 aaKnown RBP6.71□□□□□ -1.34
IGKV2D-28-202ENST00000558026 PSMB6P28072 239 aa6.71□□□□□ -1.34
IGKV2D-28-202ENST00000558026 RPS11P62280 158 aaKnown RBP eCLIP6.71□□□□□ -1.34
IGKV2D-28-202ENST00000558026 TIMM50Q3ZCQ8 353 aa6.71□□□□□ -1.34
IGKV2D-28-202ENST00000558026 GPR107Q5VW38 600 aa6.71□□□□□ -1.34
IGKV2D-28-202ENST00000558026 GLT8D1Q68CQ7 371 aa6.71□□□□□ -1.34
IGKV2D-28-202ENST00000558026 RPL22L1Q6P5R6 122 aaKnown RBP6.71□□□□□ -1.34
IGKV2D-28-202ENST00000558026 PLET1Q6UQ28 207 aa6.71□□□□□ -1.34
IGKV2D-28-202ENST00000558026 TRPT1Q86TN4 253 aaKnown RBP6.71□□□□□ -1.34
IGKV2D-28-202ENST00000558026 CLVS1Q8IUQ0 354 aaPredicted RBP6.71□□□□□ -1.34
IGKV2D-28-202ENST00000558026 FAM24BQ8N5W8 94 aa6.71□□□□□ -1.34
IGKV2D-28-202ENST00000558026 UFD1Q92890 307 aa6.71□□□□□ -1.34
IGKV2D-28-202ENST00000558026 SPIN2AQ99865 258 aa6.71□□□□□ -1.34
IGKV2D-28-202ENST00000558026 SPIN2BQ9BPZ2 258 aa6.71□□□□□ -1.34
IGKV2D-28-202ENST00000558026 C11orf54Q9H0W9 315 aaPredicted RBP6.71□□□□□ -1.34
IGKV2D-28-202ENST00000558026 METTL9Q9H1A3 318 aa6.71□□□□□ -1.34
IGKV2D-28-202ENST00000558026 IL36GQ9NZH8 169 aa6.71□□□□□ -1.34
IGKV2D-28-202ENST00000558026 TRBV5-5A0A0J9YX44 114 aa6.7□□□□□ -1.34
IGKV2D-28-202ENST00000558026 M0R1X1 148 aa6.7□□□□□ -1.34
IGKV2D-28-202ENST00000558026 GSTT2P0CG29 244 aa6.7□□□□□ -1.34
IGKV2D-28-202ENST00000558026 GSTT2BP0CG30 244 aa6.7□□□□□ -1.34
IGKV2D-28-202ENST00000558026 GADD45AP24522 165 aa6.7□□□□□ -1.34
IGKV2D-28-202ENST00000558026 GBX2P52951 348 aaPredicted RBP6.7□□□□□ -1.34
IGKV2D-28-202ENST00000558026 RPS25P62851 125 aaKnown RBP6.7□□□□□ -1.34
IGKV2D-28-202ENST00000558026 TRAM1Q15629 374 aa6.7□□□□□ -1.34
IGKV2D-28-202ENST00000558026 HMGN3Q15651 99 aa6.7□□□□□ -1.34
IGKV2D-28-202ENST00000558026 CNPY1Q3B7I2 92 aa6.7□□□□□ -1.34
IGKV2D-28-202ENST00000558026 TMEM91Q6ZNR0 172 aa6.7□□□□□ -1.34
IGKV2D-28-202ENST00000558026 Q6ZRN7 208 aaPredicted RBP6.7□□□□□ -1.34
IGKV2D-28-202ENST00000558026 ZNF554Q86TJ5 538 aa6.7□□□□□ -1.34
IGKV2D-28-202ENST00000558026 OR5D14Q8NGL3 314 aa6.7□□□□□ -1.34
IGKV2D-28-202ENST00000558026 PHYHIPQ92561 330 aa6.7□□□□□ -1.34
IGKV2D-28-202ENST00000558026 ZNF430Q9H8G1 570 aaPredicted RBP6.7□□□□□ -1.34
IGKV2D-28-202ENST00000558026 OR1A1Q9P1Q5 309 aa6.7□□□□□ -1.34
IGKV2D-28-202ENST00000558026 TRBV7-1A0A0A6YYK4 115 aa6.69□□□□□ -1.34
IGKV2D-28-202ENST00000558026 TMEM212A6NML5 194 aa6.69□□□□□ -1.34
IGKV2D-28-202ENST00000558026 KNCNA6PVL3 124 aa6.69□□□□□ -1.34
IGKV2D-28-202ENST00000558026 TEX22C9J3V5 150 aa6.69□□□□□ -1.34
IGKV2D-28-202ENST00000558026 E7EUB6 86 aa6.69□□□□□ -1.34
IGKV2D-28-202ENST00000558026 J3QLW9 94 aa6.69□□□□□ -1.34
IGKV2D-28-202ENST00000558026 DNAH10OSP0CZ25 163 aa6.69□□□□□ -1.34
IGKV2D-28-202ENST00000558026 AREGP15514 252 aa6.69□□□□□ -1.34
IGKV2D-28-202ENST00000558026 ZNF19P17023 458 aa6.69□□□□□ -1.34
IGKV2D-28-202ENST00000558026 CELP19835 753 aa6.69□□□□□ -1.34
IGKV2D-28-202ENST00000558026 MAS1LP35410 378 aa6.69□□□□□ -1.34
IGKV2D-28-202ENST00000558026 GTF2A1P52655 376 aaPredicted RBP6.69□□□□□ -1.34
IGKV2D-28-202ENST00000558026 FABP5Q01469 135 aa6.69□□□□□ -1.34
IGKV2D-28-202ENST00000558026 TMEM41BQ5BJD5 291 aa6.69□□□□□ -1.34
IGKV2D-28-202ENST00000558026 FAM220AQ7Z4H9 259 aa6.69□□□□□ -1.34
IGKV2D-28-202ENST00000558026 SLC25A42Q86VD7 318 aa6.69□□□□□ -1.34
IGKV2D-28-202ENST00000558026 MS4A15Q8N5U1 240 aa6.69□□□□□ -1.34
IGKV2D-28-202ENST00000558026 DYNC2LI1Q8TCX1 351 aa6.69□□□□□ -1.34
IGKV2D-28-202ENST00000558026 NIPSNAP3BQ9BS92 247 aa6.69□□□□□ -1.34
IGKV2D-28-202ENST00000558026 CENPOQ9BU64 300 aa6.69□□□□□ -1.34
IGKV2D-28-202ENST00000558026 OR51E2Q9H255 320 aa6.69□□□□□ -1.34
IGKV2D-28-202ENST00000558026 Q9H8V8 135 aa6.69□□□□□ -1.34
IGKV2D-28-202ENST00000558026 SMPXQ9UHP9 88 aa6.69□□□□□ -1.34
IGKV2D-28-202ENST00000558026 IGHV3OR16-13A0A075B7E8 117 aa6.68□□□□□ -1.34
IGKV2D-28-202ENST00000558026 IGHV3-74A0A0B4J1X5 117 aa6.68□□□□□ -1.34
IGKV2D-28-202ENST00000558026 A0A1W2PPQ1 181 aa6.68□□□□□ -1.34
IGKV2D-28-202ENST00000558026 RPS10-NUDT3A0A1W2PQS6 291 aa6.68□□□□□ -1.34
IGKV2D-28-202ENST00000558026 NUDT3O95989 172 aa6.68□□□□□ -1.34
IGKV2D-28-202ENST00000558026 UCHL1P09936 223 aa6.68□□□□□ -1.34
IGKV2D-28-202ENST00000558026 P0C879 139 aa6.68□□□□□ -1.34
IGKV2D-28-202ENST00000558026 HSMCR30P0CW71 290 aa6.68□□□□□ -1.34
IGKV2D-28-202ENST00000558026 SPP1P10451 314 aa6.68□□□□□ -1.34
IGKV2D-28-202ENST00000558026 CD37P11049 281 aa6.68□□□□□ -1.34
IGKV2D-28-202ENST00000558026 GTF2F2P13984 249 aa6.68□□□□□ -1.34
IGKV2D-28-202ENST00000558026 RAB3AP20336 220 aa6.68□□□□□ -1.34
IGKV2D-28-202ENST00000558026 GCSHP23434 173 aa6.68□□□□□ -1.34
IGKV2D-28-202ENST00000558026 NCS1P62166 190 aa6.68□□□□□ -1.34
IGKV2D-28-202ENST00000558026 SPCS2Q15005 226 aa6.68□□□□□ -1.34
IGKV2D-28-202ENST00000558026 YIF1BQ5BJH7 314 aa6.68□□□□□ -1.34
IGKV2D-28-202ENST00000558026 FAM222AQ5U5X8 452 aa6.68□□□□□ -1.34
IGKV2D-28-202ENST00000558026 SIGIRRQ6IA17 410 aa6.68□□□□□ -1.34
IGKV2D-28-202ENST00000558026 MFSD4AQ8N468 514 aa6.68□□□□□ -1.34
IGKV2D-28-202ENST00000558026 PARP16Q8N5Y8 322 aa6.68□□□□□ -1.34
IGKV2D-28-202ENST00000558026 ZFP41Q8N8Y5 198 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms