RNA–Protein interactions for RNA: ENST00000557845.1

NEDD4-212, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 374 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-212ENST00000557845 S1PR2O95136 353 aa12.74□□□□□ -0.37
NEDD4-212ENST00000557845 DHFRP00374 187 aa12.74□□□□□ -0.37
NEDD4-212ENST00000557845 RLN1P04808 185 aa12.74□□□□□ -0.37
NEDD4-212ENST00000557845 CSN3P07498 182 aa12.74□□□□□ -0.37
NEDD4-212ENST00000557845 ZNF182P17025 639 aaPredicted RBP12.74□□□□□ -0.37
NEDD4-212ENST00000557845 CTRB1P17538 263 aa12.74□□□□□ -0.37
NEDD4-212ENST00000557845 F2RP25116 425 aa12.74□□□□□ -0.37
NEDD4-212ENST00000557845 OR2B8PP59922 312 aa12.74□□□□□ -0.37
NEDD4-212ENST00000557845 KLK9Q2XQG4 91 aa12.74□□□□□ -0.37
NEDD4-212ENST00000557845 CTRB2Q6GPI1 263 aa12.74□□□□□ -0.37
NEDD4-212ENST00000557845 CMTM1Q8IZ96 169 aa12.74□□□□□ -0.37
NEDD4-212ENST00000557845 AP3S1Q92572 193 aa12.74□□□□□ -0.37
NEDD4-212ENST00000557845 DGCR14Q96DF8 476 aaKnown RBP12.74□□□□□ -0.37
NEDD4-212ENST00000557845 FANCD2OSQ96PS1 177 aa12.74□□□□□ -0.37
NEDD4-212ENST00000557845 MRPS26Q9BYN8 205 aaKnown RBP12.74□□□□□ -0.37
NEDD4-212ENST00000557845 FXYD6Q9H0Q3 95 aa12.74□□□□□ -0.37
NEDD4-212ENST00000557845 TMEM140Q9NV12 185 aa12.74□□□□□ -0.37
NEDD4-212ENST00000557845 SIGLEC8Q9NYZ4 499 aa12.74□□□□□ -0.37
NEDD4-212ENST00000557845 KLK9Q9UKQ9 250 aa12.74□□□□□ -0.37
NEDD4-212ENST00000557845 DMRT1Q9Y5R6 373 aa12.74□□□□□ -0.37
NEDD4-212ENST00000557845 NDUFB8O95169 186 aa12.73□□□□□ -0.37
NEDD4-212ENST00000557845 FGF2P09038 288 aa12.73□□□□□ -0.37
NEDD4-212ENST00000557845 RCVRNP35243 200 aa12.73□□□□□ -0.37
NEDD4-212ENST00000557845 LPAR6P43657 344 aa12.73□□□□□ -0.37
NEDD4-212ENST00000557845 ALDH3B2P48448 385 aa12.73□□□□□ -0.37
NEDD4-212ENST00000557845 FAM209BQ5JX69 171 aa12.73□□□□□ -0.37
NEDD4-212ENST00000557845 LPCAT3Q6P1A2 487 aa12.73□□□□□ -0.37
NEDD4-212ENST00000557845 FCAMRQ8WWV6 532 aa12.73□□□□□ -0.37
NEDD4-212ENST00000557845 COMMD5Q9GZQ3 224 aa12.73□□□□□ -0.37
NEDD4-212ENST00000557845 COMMD9Q9P000 198 aa12.73□□□□□ -0.37
NEDD4-212ENST00000557845 REG1AP05451 166 aa12.72□□□□□ -0.37
NEDD4-212ENST00000557845 DEFA4P12838 97 aa12.72□□□□□ -0.37
NEDD4-212ENST00000557845 RPA2P15927 270 aa12.72□□□□□ -0.37
NEDD4-212ENST00000557845 HIST1H1BP16401 226 aaKnown RBP12.72□□□□□ -0.37
NEDD4-212ENST00000557845 ZNF585BQ52M93 769 aa12.72□□□□□ -0.37
NEDD4-212ENST00000557845 GPR141Q7Z602 305 aa12.72□□□□□ -0.37
NEDD4-212ENST00000557845 Q8N1Y9 231 aa12.72□□□□□ -0.37
NEDD4-212ENST00000557845 PEMTQ9UBM1 199 aa12.72□□□□□ -0.37
NEDD4-212ENST00000557845 U3KQK5 164 aa12.72□□□□□ -0.37
NEDD4-212ENST00000557845 MARCH11A6NNE9 402 aa12.71□□□□□ -0.37
NEDD4-212ENST00000557845 PPP5D1E7EU14 171 aa12.71□□□□□ -0.37
NEDD4-212ENST00000557845 H0Y980 276 aa12.71□□□□□ -0.37
NEDD4-212ENST00000557845 ERVK-16P61578 105 aa12.71□□□□□ -0.37
NEDD4-212ENST00000557845 PHLDA2Q53GA4 152 aa12.71□□□□□ -0.37
NEDD4-212ENST00000557845 SBSPONQ8IVN8 264 aa12.71□□□□□ -0.37
NEDD4-212ENST00000557845 WWC2-AS2Q96NR7 200 aa12.71□□□□□ -0.37
NEDD4-212ENST00000557845 SRSF8Q9BRL6 282 aaKnown RBP12.71□□□□□ -0.37
NEDD4-212ENST00000557845 KLK11Q9UBX7 282 aa12.71□□□□□ -0.37
NEDD4-212ENST00000557845 IGLV11-55A0A075B6I3 123 aa12.7□□□□□ -0.38
NEDD4-212ENST00000557845 TEX50A0A1B0GTY4 177 aa12.7□□□□□ -0.38
NEDD4-212ENST00000557845 IGLC7A0M8Q6 106 aa12.7□□□□□ -0.38
NEDD4-212ENST00000557845 GGCTO75223 188 aaKnown RBP12.7□□□□□ -0.38
NEDD4-212ENST00000557845 OR2C1O95371 312 aa12.7□□□□□ -0.38
NEDD4-212ENST00000557845 KRASP01116 189 aa12.7□□□□□ -0.38
NEDD4-212ENST00000557845 IGHV3-23P01764 117 aa12.7□□□□□ -0.38
NEDD4-212ENST00000557845 FRMD6-AS1P0C7T7 363 aa12.7□□□□□ -0.38
NEDD4-212ENST00000557845 MECP2P51608 486 aaKnown RBP12.7□□□□□ -0.38
NEDD4-212ENST00000557845 UCP3P55916 312 aa12.7□□□□□ -0.38
NEDD4-212ENST00000557845 CADM3Q8N126 398 aa12.7□□□□□ -0.38
NEDD4-212ENST00000557845 OR10W1Q8NGF6 305 aa12.7□□□□□ -0.38
NEDD4-212ENST00000557845 EEF1AKMT3Q96AZ1 226 aa12.7□□□□□ -0.38
NEDD4-212ENST00000557845 QTRT1Q9BXR0 403 aaKnown RBP12.7□□□□□ -0.38
NEDD4-212ENST00000557845 EXTL2Q9UBQ6 330 aa12.7□□□□□ -0.38
NEDD4-212ENST00000557845 S4R3C0 116 aa12.7□□□□□ -0.38
NEDD4-212ENST00000557845 M0QYG6 137 aa12.69□□□□□ -0.38
NEDD4-212ENST00000557845 TPPPO94811 219 aa12.69□□□□□ -0.38
NEDD4-212ENST00000557845 HLA-AP01891 365 aaKnown RBP12.69□□□□□ -0.38
NEDD4-212ENST00000557845 TRAPPC2P0DI81 140 aa12.69□□□□□ -0.38
NEDD4-212ENST00000557845 TRAPPC2BP0DI82 140 aa12.69□□□□□ -0.38
NEDD4-212ENST00000557845 S100GP29377 79 aa12.69□□□□□ -0.38
NEDD4-212ENST00000557845 G6PCP35575 357 aa12.69□□□□□ -0.38
NEDD4-212ENST00000557845 RNASE12Q5GAN4 147 aaKnown RBP12.69□□□□□ -0.38
NEDD4-212ENST00000557845 THOC7Q6I9Y2 204 aaKnown RBP12.69□□□□□ -0.38
NEDD4-212ENST00000557845 CLEC19AQ6UXS0 136 aa12.69□□□□□ -0.38
NEDD4-212ENST00000557845 TBC1D26Q86UD7 250 aa12.69□□□□□ -0.38
NEDD4-212ENST00000557845 GPHB5Q86YW7 130 aa12.69□□□□□ -0.38
NEDD4-212ENST00000557845 OR52I2Q8NH67 350 aa12.69□□□□□ -0.38
NEDD4-212ENST00000557845 CCDC140Q96MF4 163 aa12.69□□□□□ -0.38
NEDD4-212ENST00000557845 ABHD1Q96SE0 405 aa12.69□□□□□ -0.38
NEDD4-212ENST00000557845 FAM212BQ9NTI7 297 aaPredicted RBP12.69□□□□□ -0.38
NEDD4-212ENST00000557845 TRBV7-1A0A0A6YYK4 115 aa12.68□□□□□ -0.38
NEDD4-212ENST00000557845 SNAPC5O75971 98 aa12.68□□□□□ -0.38
NEDD4-212ENST00000557845 IFNA6P05013 189 aa12.68□□□□□ -0.38
NEDD4-212ENST00000557845 ARL3P36405 182 aa12.68□□□□□ -0.38
NEDD4-212ENST00000557845 SPCS2Q15005 226 aa12.68□□□□□ -0.38
NEDD4-212ENST00000557845 LCN12Q6JVE5 192 aa12.68□□□□□ -0.38
NEDD4-212ENST00000557845 ADAMTSL5Q6ZMM2 481 aa12.68□□□□□ -0.38
NEDD4-212ENST00000557845 SLC38A6Q8IZM9 456 aa12.68□□□□□ -0.38
NEDD4-212ENST00000557845 Q8N402 240 aa12.68□□□□□ -0.38
NEDD4-212ENST00000557845 OR1L8Q8NGR8 309 aa12.68□□□□□ -0.38
NEDD4-212ENST00000557845 CXorf58Q96LI9 332 aa12.68□□□□□ -0.38
NEDD4-212ENST00000557845 NDUFA4L2Q9NRX3 87 aa12.68□□□□□ -0.38
NEDD4-212ENST00000557845 MTFP1Q9UDX5 166 aa12.68□□□□□ -0.38
NEDD4-212ENST00000557845 NSG2Q9Y328 171 aa12.68□□□□□ -0.38
NEDD4-212ENST00000557845 IZUMO1RA6ND01 250 aa12.67□□□□□ -0.38
NEDD4-212ENST00000557845 MFSD2BA6NFX1 497 aa12.67□□□□□ -0.38
NEDD4-212ENST00000557845 A8MZ25 164 aa12.67□□□□□ -0.38
NEDD4-212ENST00000557845 LGALS9O00182 355 aa12.67□□□□□ -0.38
NEDD4-212ENST00000557845 CD3DP04234 171 aa12.67□□□□□ -0.38
NEDD4-212ENST00000557845 CLEC3BP05452 202 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms