RNA–Protein interactions for RNA: ENST00000557727.1

CHD8-214, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

Gene CHD8, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-214ENST00000557727 UPK2O00526 184 aa7.05□□□□□ -1.28
CHD8-214ENST00000557727 KCNAB3O43448 404 aa7.05□□□□□ -1.28
CHD8-214ENST00000557727 CDS2O95674 445 aa7.05□□□□□ -1.28
CHD8-214ENST00000557727 HRASP01112 189 aa7.05□□□□□ -1.28
CHD8-214ENST00000557727 FGF2P09038 288 aa7.05□□□□□ -1.28
CHD8-214ENST00000557727 OR5AC1P0C628 307 aa7.05□□□□□ -1.28
CHD8-214ENST00000557727 OR9G9P0C7N8 305 aa7.05□□□□□ -1.28
CHD8-214ENST00000557727 CD28P10747 220 aa7.05□□□□□ -1.28
CHD8-214ENST00000557727 NQO2P16083 231 aa7.05□□□□□ -1.28
CHD8-214ENST00000557727 G6PCP35575 357 aa7.05□□□□□ -1.28
CHD8-214ENST00000557727 CD83Q01151 205 aa7.05□□□□□ -1.28
CHD8-214ENST00000557727 CBX3Q13185 183 aa7.05□□□□□ -1.28
CHD8-214ENST00000557727 KIAA0141Q14154 515 aaPredicted RBP7.05□□□□□ -1.28
CHD8-214ENST00000557727 TMEM187Q14656 261 aa7.05□□□□□ -1.28
CHD8-214ENST00000557727 RBMS2Q15434 407 aaKnown RBP7.05□□□□□ -1.28
CHD8-214ENST00000557727 VMA21Q3ZAQ7 101 aa7.05□□□□□ -1.28
CHD8-214ENST00000557727 C12orf54Q6X4T0 127 aa7.05□□□□□ -1.28
CHD8-214ENST00000557727 SSX9Q7RTT3 188 aa7.05□□□□□ -1.28
CHD8-214ENST00000557727 ZNF329Q86UD4 541 aa7.05□□□□□ -1.28
CHD8-214ENST00000557727 SGMS2Q8NHU3 365 aa7.05□□□□□ -1.28
CHD8-214ENST00000557727 MYOZ3Q8TDC0 251 aa7.05□□□□□ -1.28
CHD8-214ENST00000557727 TMEM56Q96MV1 263 aa7.05□□□□□ -1.28
CHD8-214ENST00000557727 CITED4Q96RK1 184 aa7.05□□□□□ -1.28
CHD8-214ENST00000557727 FAM103A1Q9BTL3 118 aaKnown RBP7.05□□□□□ -1.28
CHD8-214ENST00000557727 TMEM222Q9H0R3 208 aa7.05□□□□□ -1.28
CHD8-214ENST00000557727 PRR13Q9NZ81 148 aa7.05□□□□□ -1.28
CHD8-214ENST00000557727 COPZ2Q9P299 210 aa7.05□□□□□ -1.28
CHD8-214ENST00000557727 FLVCR2Q9UPI3 526 aa7.05□□□□□ -1.28
CHD8-214ENST00000557727 C14orf166Q9Y224 244 aaKnown RBP7.05□□□□□ -1.28
CHD8-214ENST00000557727 TMEM56-RWDD3S4R434 201 aa7.05□□□□□ -1.28
CHD8-214ENST00000557727 NOTCH1P46531 2555 aa7.04□□□□□ -1.28
CHD8-214ENST00000557727 TEX13DA0A0J9YY54 714 aaPredicted RBP7.04□□□□□ -1.28
CHD8-214ENST00000557727 KRASP01116 189 aa7.04□□□□□ -1.28
CHD8-214ENST00000557727 IGHG4P01861 327 aa7.04□□□□□ -1.28
CHD8-214ENST00000557727 RPA2P15927 270 aa7.04□□□□□ -1.28
CHD8-214ENST00000557727 PSMB8P28062 276 aa7.04□□□□□ -1.28
CHD8-214ENST00000557727 DEFA1P59665 94 aa7.04□□□□□ -1.28
CHD8-214ENST00000557727 DEFA3P59666 94 aa7.04□□□□□ -1.28
CHD8-214ENST00000557727 FXYD3Q14802 87 aa7.04□□□□□ -1.28
CHD8-214ENST00000557727 IZUMO4Q1ZYL8 232 aa7.04□□□□□ -1.28
CHD8-214ENST00000557727 KRTAP19-4Q3LI73 84 aa7.04□□□□□ -1.28
CHD8-214ENST00000557727 SLC25A42Q86VD7 318 aa7.04□□□□□ -1.28
CHD8-214ENST00000557727 FOXRED2Q8IWF2 684 aa7.04□□□□□ -1.28
CHD8-214ENST00000557727 MMD2Q8IY49 270 aa7.04□□□□□ -1.28
CHD8-214ENST00000557727 SELENOHQ8IZQ5 122 aaKnown RBP7.04□□□□□ -1.28
CHD8-214ENST00000557727 CCDC71LQ8N9Z2 235 aa7.04□□□□□ -1.28
CHD8-214ENST00000557727 POC5Q8NA72 575 aa7.04□□□□□ -1.28
CHD8-214ENST00000557727 OR5AU1Q8NGC0 362 aa7.04□□□□□ -1.28
CHD8-214ENST00000557727 OR4A5Q8NH83 315 aa7.04□□□□□ -1.28
CHD8-214ENST00000557727 CHPT1Q8WUD6 406 aa7.04□□□□□ -1.28
CHD8-214ENST00000557727 SRSF12Q8WXF0 261 aaKnown RBP7.04□□□□□ -1.28
CHD8-214ENST00000557727 ARPC1AQ92747 370 aa7.04□□□□□ -1.28
CHD8-214ENST00000557727 PALMDQ9NP74 551 aa7.04□□□□□ -1.28
CHD8-214ENST00000557727 PARP11Q9NR21 331 aa7.04□□□□□ -1.28
CHD8-214ENST00000557727 WSB1Q9Y6I7 421 aa7.04□□□□□ -1.28
CHD8-214ENST00000557727 U3KQE9 123 aa7.04□□□□□ -1.28
CHD8-214ENST00000557727 CMYA5Q8N3K9 4069 aa7.04□□□□□ -1.28
CHD8-214ENST00000557727 TRAV41A0A0B4J266 112 aa7.03□□□□□ -1.28
CHD8-214ENST00000557727 A0A0B4J293 547 aa7.03□□□□□ -1.28
CHD8-214ENST00000557727 PSMB11A5LHX3 300 aa7.03□□□□□ -1.28
CHD8-214ENST00000557727 RBMXL2O75526 392 aaKnown RBP7.03□□□□□ -1.28
CHD8-214ENST00000557727 B3GALNT1O75752 331 aa7.03□□□□□ -1.28
CHD8-214ENST00000557727 AKR1C4P17516 323 aa7.03□□□□□ -1.28
CHD8-214ENST00000557727 S100GP29377 79 aa7.03□□□□□ -1.28
CHD8-214ENST00000557727 MECP2P51608 486 aaKnown RBP7.03□□□□□ -1.28
CHD8-214ENST00000557727 OR2B8PP59922 312 aa7.03□□□□□ -1.28
CHD8-214ENST00000557727 RPL8P62917 257 aaKnown RBP7.03□□□□□ -1.28
CHD8-214ENST00000557727 PPP1R1AQ13522 171 aa7.03□□□□□ -1.28
CHD8-214ENST00000557727 DCTN2Q13561 401 aaKnown RBP7.03□□□□□ -1.28
CHD8-214ENST00000557727 PLGLAQ15195 96 aa7.03□□□□□ -1.28
CHD8-214ENST00000557727 ANKRD55Q3KP44 614 aa7.03□□□□□ -1.28
CHD8-214ENST00000557727 AARDQ4LEZ3 155 aa7.03□□□□□ -1.28
CHD8-214ENST00000557727 AKIRIN2Q53H80 203 aa7.03□□□□□ -1.28
CHD8-214ENST00000557727 TMEM128Q5BJH2 165 aa7.03□□□□□ -1.28
CHD8-214ENST00000557727 MZT2BQ6NZ67 158 aa7.03□□□□□ -1.28
CHD8-214ENST00000557727 Q6ZRM9 215 aa7.03□□□□□ -1.28
CHD8-214ENST00000557727 LCNL1Q6ZST4 164 aa7.03□□□□□ -1.28
CHD8-214ENST00000557727 TMED4Q7Z7H5 227 aa7.03□□□□□ -1.28
CHD8-214ENST00000557727 C3orf56Q8N813 242 aa7.03□□□□□ -1.28
CHD8-214ENST00000557727 C11orf44Q8N8P7 122 aa7.03□□□□□ -1.28
CHD8-214ENST00000557727 LFNGQ8NES3 379 aa7.03□□□□□ -1.28
CHD8-214ENST00000557727 GRPEL2Q8TAA5 225 aa7.03□□□□□ -1.28
CHD8-214ENST00000557727 VSTM2AQ8TAG5 236 aa7.03□□□□□ -1.28
CHD8-214ENST00000557727 SCGB3A2Q96PL1 93 aa7.03□□□□□ -1.28
CHD8-214ENST00000557727 CITED2Q99967 270 aaPredicted RBP7.03□□□□□ -1.28
CHD8-214ENST00000557727 KLK15Q9H2R5 256 aa7.03□□□□□ -1.28
CHD8-214ENST00000557727 TMEM14BQ9NUH8 114 aa7.03□□□□□ -1.28
CHD8-214ENST00000557727 NSG2Q9Y328 171 aa7.03□□□□□ -1.28
CHD8-214ENST00000557727 IGLC7A0M8Q6 106 aa7.02□□□□□ -1.29
CHD8-214ENST00000557727 MSGN1A6NI15 193 aa7.02□□□□□ -1.29
CHD8-214ENST00000557727 C15orf61A6NNL5 157 aa7.02□□□□□ -1.29
CHD8-214ENST00000557727 SFT2D2O95562 160 aa7.02□□□□□ -1.29
CHD8-214ENST00000557727 TCRBP04435 133 aa7.02□□□□□ -1.29
CHD8-214ENST00000557727 HLA-GP17693 338 aa7.02□□□□□ -1.29
CHD8-214ENST00000557727 ANXA7P20073 488 aaKnown RBP7.02□□□□□ -1.29
CHD8-214ENST00000557727 MAS1LP35410 378 aa7.02□□□□□ -1.29
CHD8-214ENST00000557727 UBE2MP61081 183 aaKnown RBP7.02□□□□□ -1.29
CHD8-214ENST00000557727 GNB1P62873 340 aa7.02□□□□□ -1.29
CHD8-214ENST00000557727 FOXE3Q13461 319 aa7.02□□□□□ -1.29
CHD8-214ENST00000557727 TNXAQ16473 311 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms