RNA–Protein interactions for RNA: ENST00000557285.1

VSX1-207, Transcript of visual system homeobox 1, humanhuman

TSL 3

Gene VSX1, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-207ENST00000557285 M0QYG6 137 aa12.64□□□□□ -0.39
VSX1-207ENST00000557285 BMPR1BO00238 502 aa12.64□□□□□ -0.39
VSX1-207ENST00000557285 GPR31O00270 319 aa12.64□□□□□ -0.39
VSX1-207ENST00000557285 NDUFB8O95169 186 aa12.64□□□□□ -0.39
VSX1-207ENST00000557285 HLA-AP01891 365 aaKnown RBP12.64□□□□□ -0.39
VSX1-207ENST00000557285 PSMB6P28072 239 aa12.64□□□□□ -0.39
VSX1-207ENST00000557285 RCVRNP35243 200 aa12.64□□□□□ -0.39
VSX1-207ENST00000557285 TATDN3Q17R31 274 aa12.64□□□□□ -0.39
VSX1-207ENST00000557285 CMTM1Q8IZ96 169 aa12.64□□□□□ -0.39
VSX1-207ENST00000557285 CD300LFQ8TDQ1 290 aa12.64□□□□□ -0.39
VSX1-207ENST00000557285 CMTM3Q96MX0 182 aa12.64□□□□□ -0.39
VSX1-207ENST00000557285 SCPEP1Q9HB40 452 aa12.64□□□□□ -0.39
VSX1-207ENST00000557285 EXTL2Q9UBQ6 330 aa12.64□□□□□ -0.39
VSX1-207ENST00000557285 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.63□□□□□ -0.39
VSX1-207ENST00000557285 CGB1A6NKQ9 187 aa12.63□□□□□ -0.39
VSX1-207ENST00000557285 UPK2O00526 184 aa12.63□□□□□ -0.39
VSX1-207ENST00000557285 ZNF182P17025 639 aaPredicted RBP12.63□□□□□ -0.39
VSX1-207ENST00000557285 LPAR6P43657 344 aa12.63□□□□□ -0.39
VSX1-207ENST00000557285 OR2B8PP59922 312 aa12.63□□□□□ -0.39
VSX1-207ENST00000557285 IL34Q6ZMJ4 242 aa12.63□□□□□ -0.39
VSX1-207ENST00000557285 FCAMRQ8WWV6 532 aa12.63□□□□□ -0.39
VSX1-207ENST00000557285 DGCR14Q96DF8 476 aaKnown RBP12.63□□□□□ -0.39
VSX1-207ENST00000557285 HINT2Q9BX68 163 aa12.63□□□□□ -0.39
VSX1-207ENST00000557285 COMMD5Q9GZQ3 224 aa12.63□□□□□ -0.39
VSX1-207ENST00000557285 PLEKHA2Q9HB19 425 aa12.63□□□□□ -0.39
VSX1-207ENST00000557285 NSG2Q9Y328 171 aa12.63□□□□□ -0.39
VSX1-207ENST00000557285 MARCH11A6NNE9 402 aa12.62□□□□□ -0.39
VSX1-207ENST00000557285 DHFRP00374 187 aa12.62□□□□□ -0.39
VSX1-207ENST00000557285 KRASP01116 189 aa12.62□□□□□ -0.39
VSX1-207ENST00000557285 IGLV1-51P01701 117 aa12.62□□□□□ -0.39
VSX1-207ENST00000557285 F2RP25116 425 aa12.62□□□□□ -0.39
VSX1-207ENST00000557285 G6PCP35575 357 aa12.62□□□□□ -0.39
VSX1-207ENST00000557285 OR10W1Q8NGF6 305 aa12.62□□□□□ -0.39
VSX1-207ENST00000557285 FANCD2OSQ96PS1 177 aa12.62□□□□□ -0.39
VSX1-207ENST00000557285 ZC4H2Q9NQZ6 224 aa12.62□□□□□ -0.39
VSX1-207ENST00000557285 COMMD9Q9P000 198 aa12.62□□□□□ -0.39
VSX1-207ENST00000557285 RGS5O15539 181 aa12.61□□□□□ -0.39
VSX1-207ENST00000557285 CSN3P07498 182 aa12.61□□□□□ -0.39
VSX1-207ENST00000557285 CTRB1P17538 263 aa12.61□□□□□ -0.39
VSX1-207ENST00000557285 ALDH3B2P48448 385 aa12.61□□□□□ -0.39
VSX1-207ENST00000557285 SPCS2Q15005 226 aa12.61□□□□□ -0.39
VSX1-207ENST00000557285 POU2AF1Q16633 256 aa12.61□□□□□ -0.39
VSX1-207ENST00000557285 CTRB2Q6GPI1 263 aa12.61□□□□□ -0.39
VSX1-207ENST00000557285 CLEC19AQ6UXS0 136 aa12.61□□□□□ -0.39
VSX1-207ENST00000557285 TBC1D26Q86UD7 250 aa12.61□□□□□ -0.39
VSX1-207ENST00000557285 CLVS1Q8IUQ0 354 aaPredicted RBP12.61□□□□□ -0.39
VSX1-207ENST00000557285 OR52I2Q8NH67 350 aa12.61□□□□□ -0.39
VSX1-207ENST00000557285 PEMTQ9UBM1 199 aa12.61□□□□□ -0.39
VSX1-207ENST00000557285 KLK11Q9UBX7 282 aa12.61□□□□□ -0.39
VSX1-207ENST00000557285 IGLC7A0M8Q6 106 aa12.6□□□□□ -0.39
VSX1-207ENST00000557285 OR2C1O95371 312 aa12.6□□□□□ -0.39
VSX1-207ENST00000557285 IFNA6P05013 189 aa12.6□□□□□ -0.39
VSX1-207ENST00000557285 CRYGCP07315 174 aa12.6□□□□□ -0.39
VSX1-207ENST00000557285 FRMD6-AS1P0C7T7 363 aa12.6□□□□□ -0.39
VSX1-207ENST00000557285 NHLRC4P0CG21 123 aaPredicted RBP12.6□□□□□ -0.39
VSX1-207ENST00000557285 PGAM2P15259 253 aa12.6□□□□□ -0.39
VSX1-207ENST00000557285 S100GP29377 79 aa12.6□□□□□ -0.39
VSX1-207ENST00000557285 ZNF585BQ52M93 769 aa12.6□□□□□ -0.39
VSX1-207ENST00000557285 EEF1AKMT3Q96AZ1 226 aa12.6□□□□□ -0.39
VSX1-207ENST00000557285 QTRT1Q9BXR0 403 aaKnown RBP12.6□□□□□ -0.39
VSX1-207ENST00000557285 SELENOKQ9Y6D0 94 aa12.6□□□□□ -0.39
VSX1-207ENST00000557285 U3KQK5 164 aa12.6□□□□□ -0.39
VSX1-207ENST00000557285 IZUMO1RA6ND01 250 aa12.59□□□□□ -0.39
VSX1-207ENST00000557285 MFSD2BA6NFX1 497 aa12.59□□□□□ -0.39
VSX1-207ENST00000557285 SNAPC5O75971 98 aa12.59□□□□□ -0.39
VSX1-207ENST00000557285 TRAPPC2P0DI81 140 aa12.59□□□□□ -0.39
VSX1-207ENST00000557285 TRAPPC2BP0DI82 140 aa12.59□□□□□ -0.39
VSX1-207ENST00000557285 PI3P19957 117 aa12.59□□□□□ -0.39
VSX1-207ENST00000557285 EDN2P20800 178 aa12.59□□□□□ -0.39
VSX1-207ENST00000557285 ARL3P36405 182 aa12.59□□□□□ -0.39
VSX1-207ENST00000557285 RNASE10Q5GAN6 216 aaKnown RBP12.59□□□□□ -0.39
VSX1-207ENST00000557285 LPCAT3Q6P1A2 487 aa12.59□□□□□ -0.39
VSX1-207ENST00000557285 SBSPONQ8IVN8 264 aa12.59□□□□□ -0.39
VSX1-207ENST00000557285 LAX1Q8IWV1 398 aa12.59□□□□□ -0.39
VSX1-207ENST00000557285 DYNLRB2Q8TF09 96 aa12.59□□□□□ -0.39
VSX1-207ENST00000557285 CCDC140Q96MF4 163 aa12.59□□□□□ -0.39
VSX1-207ENST00000557285 ABHD1Q96SE0 405 aa12.59□□□□□ -0.39
VSX1-207ENST00000557285 OR51B2Q9Y5P1 312 aa12.59□□□□□ -0.39
VSX1-207ENST00000557285 IGLV11-55A0A075B6I3 123 aa12.58□□□□□ -0.4
VSX1-207ENST00000557285 TEX50A0A1B0GTY4 177 aa12.58□□□□□ -0.4
VSX1-207ENST00000557285 H0Y980 276 aa12.58□□□□□ -0.4
VSX1-207ENST00000557285 GGCTO75223 188 aaKnown RBP12.58□□□□□ -0.4
VSX1-207ENST00000557285 CD3DP04234 171 aa12.58□□□□□ -0.4
VSX1-207ENST00000557285 OR13C7P0DN81 318 aa12.58□□□□□ -0.4
VSX1-207ENST00000557285 HIST1H1BP16401 226 aaKnown RBP12.58□□□□□ -0.4
VSX1-207ENST00000557285 MECP2P51608 486 aaKnown RBP12.58□□□□□ -0.4
VSX1-207ENST00000557285 PPP5CP53041 499 aa12.58□□□□□ -0.4
VSX1-207ENST00000557285 SLC38A6Q8IZM9 456 aa12.58□□□□□ -0.4
VSX1-207ENST00000557285 OR1L8Q8NGR8 309 aa12.58□□□□□ -0.4
VSX1-207ENST00000557285 MIXL1Q9H2W2 232 aa12.58□□□□□ -0.4
VSX1-207ENST00000557285 IGHV3-21A0A0B4J1V1 117 aa12.57□□□□□ -0.4
VSX1-207ENST00000557285 IGHV3-35A0A0C4DH35 117 aa12.57□□□□□ -0.4
VSX1-207ENST00000557285 ZNF320A2RRD8 509 aa12.57□□□□□ -0.4
VSX1-207ENST00000557285 CTDSP2O14595 271 aa12.57□□□□□ -0.4
VSX1-207ENST00000557285 IGHV4-30-4P0DP06 118 aa12.57□□□□□ -0.4
VSX1-207ENST00000557285 LCN12Q6JVE5 192 aa12.57□□□□□ -0.4
VSX1-207ENST00000557285 SGPP2Q8IWX5 399 aa12.57□□□□□ -0.4
VSX1-207ENST00000557285 WWC2-AS2Q96NR7 200 aa12.57□□□□□ -0.4
VSX1-207ENST00000557285 DMRT1Q9Y5R6 373 aa12.57□□□□□ -0.4
VSX1-207ENST00000557285 HUWE1Q7Z6Z7 4374 aaKnown RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 226.8 ms