RNA–Protein interactions for RNA: ENST00000556876.1

CHGA-206, Transcript of chromogranin A, humanhuman

TSL 2

Gene CHGA, Length 912 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-206ENST00000556876 ELF5Q9UKW6 265 aaPredicted RBP12.9□□□□□ -0.34
CHGA-206ENST00000556876 LOC102724200A0A096LPH7 203 aaPredicted RBP12.89□□□□□ -0.35
CHGA-206ENST00000556876 IGKV1D-13A0A0B4J2D9 117 aa12.89□□□□□ -0.35
CHGA-206ENST00000556876 NDUFB8O95169 186 aa12.89□□□□□ -0.35
CHGA-206ENST00000556876 IGKV1-13P0DP09 117 aa12.89□□□□□ -0.35
CHGA-206ENST00000556876 NQO2P16083 231 aa12.89□□□□□ -0.35
CHGA-206ENST00000556876 FCGR2CP31995 323 aa12.89□□□□□ -0.35
CHGA-206ENST00000556876 CBX5P45973 191 aa12.89□□□□□ -0.35
CHGA-206ENST00000556876 SFXN4Q6P4A7 337 aa12.89□□□□□ -0.35
CHGA-206ENST00000556876 NR2C2APQ86WQ0 139 aa12.89□□□□□ -0.35
CHGA-206ENST00000556876 SPAG16Q8N0X2 631 aa12.89□□□□□ -0.35
CHGA-206ENST00000556876 BEST4Q8NFU0 473 aa12.89□□□□□ -0.35
CHGA-206ENST00000556876 WDR89Q96FK6 387 aaPredicted RBP12.89□□□□□ -0.35
CHGA-206ENST00000556876 Q9H521 79 aa12.89□□□□□ -0.35
CHGA-206ENST00000556876 DIABLOQ9NR28 239 aa12.89□□□□□ -0.35
CHGA-206ENST00000556876 RHBDL2Q9NX52 303 aa12.89□□□□□ -0.35
CHGA-206ENST00000556876 RRP15Q9Y3B9 282 aaKnown RBP12.89□□□□□ -0.35
CHGA-206ENST00000556876 EPPK1P58107 5090 aaKnown RBP12.88□□□□□ -0.35
CHGA-206ENST00000556876 IGLV11-55A0A075B6I3 123 aa12.88□□□□□ -0.35
CHGA-206ENST00000556876 TMEM213A2RRL7 107 aa12.88□□□□□ -0.35
CHGA-206ENST00000556876 ANKRD65E5RJM6 399 aa12.88□□□□□ -0.35
CHGA-206ENST00000556876 HLA-AP01891 365 aaKnown RBP12.88□□□□□ -0.35
CHGA-206ENST00000556876 C8orf88P0DMB2 117 aa12.88□□□□□ -0.35
CHGA-206ENST00000556876 PTBP1P26599 531 aaKnown RBP eCLIP12.88□□□□□ -0.35
CHGA-206ENST00000556876 PSMB9P28065 219 aa12.88□□□□□ -0.35
CHGA-206ENST00000556876 POU2AF1Q16633 256 aa12.88□□□□□ -0.35
CHGA-206ENST00000556876 HOGA1Q86XE5 327 aa12.88□□□□□ -0.35
CHGA-206ENST00000556876 TMEM61Q8N0U2 210 aa12.88□□□□□ -0.35
CHGA-206ENST00000556876 OR13F1Q8NGS4 319 aa12.88□□□□□ -0.35
CHGA-206ENST00000556876 SECTM1Q8WVN6 248 aa12.88□□□□□ -0.35
CHGA-206ENST00000556876 CCDC140Q96MF4 163 aa12.88□□□□□ -0.35
CHGA-206ENST00000556876 GAR1Q9NY12 217 aaKnown RBP12.88□□□□□ -0.35
CHGA-206ENST00000556876 TP53TG1Q9Y2A0 90 aa12.88□□□□□ -0.35
CHGA-206ENST00000556876 UBE2CO00762 179 aa12.87□□□□□ -0.35
CHGA-206ENST00000556876 AREGP15514 252 aa12.87□□□□□ -0.35
CHGA-206ENST00000556876 APOC4P55056 127 aa12.87□□□□□ -0.35
CHGA-206ENST00000556876 TIMM50Q3ZCQ8 353 aa12.87□□□□□ -0.35
CHGA-206ENST00000556876 LAMTOR1Q6IAA8 161 aa12.87□□□□□ -0.35
CHGA-206ENST00000556876 PLET1Q6UQ28 207 aa12.87□□□□□ -0.35
CHGA-206ENST00000556876 SSX9Q7RTT3 188 aa12.87□□□□□ -0.35
CHGA-206ENST00000556876 CADM3Q8N126 398 aa12.87□□□□□ -0.35
CHGA-206ENST00000556876 OR1L6Q8NGR2 347 aa12.87□□□□□ -0.35
CHGA-206ENST00000556876 VN1R17PQ8TDU5 208 aa12.87□□□□□ -0.35
CHGA-206ENST00000556876 GIMAP1Q8WWP7 306 aa12.87□□□□□ -0.35
CHGA-206ENST00000556876 FAM110AQ9BQ89 295 aa12.87□□□□□ -0.35
CHGA-206ENST00000556876 PLEKHA2Q9HB19 425 aa12.87□□□□□ -0.35
CHGA-206ENST00000556876 RETNQ9HD89 108 aa12.87□□□□□ -0.35
CHGA-206ENST00000556876 E7EUB6 86 aa12.86□□□□□ -0.35
CHGA-206ENST00000556876 SSX5O60225 188 aa12.86□□□□□ -0.35
CHGA-206ENST00000556876 PPYP01298 95 aa12.86□□□□□ -0.35
CHGA-206ENST00000556876 BRWD1-AS2P59051 145 aa12.86□□□□□ -0.35
CHGA-206ENST00000556876 OR2B8PP59922 312 aa12.86□□□□□ -0.35
CHGA-206ENST00000556876 SPSB3Q6PJ21 355 aa12.86□□□□□ -0.35
CHGA-206ENST00000556876 SPARTQ8N0X7 666 aa12.86□□□□□ -0.35
CHGA-206ENST00000556876 OR2C3Q8N628 320 aa12.86□□□□□ -0.35
CHGA-206ENST00000556876 LGALS14Q8TCE9 139 aa12.86□□□□□ -0.35
CHGA-206ENST00000556876 SPAG8Q99932 426 aaPredicted RBP12.86□□□□□ -0.35
CHGA-206ENST00000556876 QTRT1Q9BXR0 403 aaKnown RBP12.86□□□□□ -0.35
CHGA-206ENST00000556876 SLC5A7Q9GZV3 580 aa12.86□□□□□ -0.35
CHGA-206ENST00000556876 C5orf66Q9H5L9 145 aa12.86□□□□□ -0.35
CHGA-206ENST00000556876 CCL28Q9NRJ3 127 aa12.86□□□□□ -0.35
CHGA-206ENST00000556876 COMMD9Q9P000 198 aa12.86□□□□□ -0.35
CHGA-206ENST00000556876 MLXQ9UH92 298 aa12.86□□□□□ -0.35
CHGA-206ENST00000556876 TRAV18A0A075B6X5 111 aa12.85□□□□□ -0.35
CHGA-206ENST00000556876 UPK2O00526 184 aa12.85□□□□□ -0.35
CHGA-206ENST00000556876 ERVK-16P61578 105 aa12.85□□□□□ -0.35
CHGA-206ENST00000556876 TM4SF20Q53R12 229 aa12.85□□□□□ -0.35
CHGA-206ENST00000556876 Q6ZWC4 215 aa12.85□□□□□ -0.35
CHGA-206ENST00000556876 CROCCP3Q8IVE0 287 aa12.85□□□□□ -0.35
CHGA-206ENST00000556876 DMBX1Q8NFW5 382 aa12.85□□□□□ -0.35
CHGA-206ENST00000556876 IGHV3-23P01764 117 aa12.84□□□□□ -0.35
CHGA-206ENST00000556876 ATF4P18848 351 aaPredicted RBP12.84□□□□□ -0.35
CHGA-206ENST00000556876 BMI1P35226 326 aa12.84□□□□□ -0.35
CHGA-206ENST00000556876 CMC4P56277 68 aaPredicted RBP12.84□□□□□ -0.35
CHGA-206ENST00000556876 ZNF585BQ52M93 769 aa12.84□□□□□ -0.35
CHGA-206ENST00000556876 WFDC3Q8IUB2 231 aa12.84□□□□□ -0.35
CHGA-206ENST00000556876 TMEM217Q8N7C4 229 aa12.84□□□□□ -0.35
CHGA-206ENST00000556876 OR5AP2Q8NGF4 316 aa12.84□□□□□ -0.35
CHGA-206ENST00000556876 ZNF502Q8TBZ5 544 aa12.84□□□□□ -0.35
CHGA-206ENST00000556876 BSCL2Q96G97 398 aaPredicted RBP12.84□□□□□ -0.35
CHGA-206ENST00000556876 ZNF436Q9C0F3 470 aaPredicted RBP12.84□□□□□ -0.35
CHGA-206ENST00000556876 FKBP11Q9NYL4 201 aa12.84□□□□□ -0.35
CHGA-206ENST00000556876 KIR2DL5BA0A0G2JN68 375 aa12.83□□□□□ -0.36
CHGA-206ENST00000556876 KIR2DL5BA0A0G2JPC4 375 aa12.83□□□□□ -0.36
CHGA-206ENST00000556876 A0A1B0GW64 132 aa12.83□□□□□ -0.36
CHGA-206ENST00000556876 IGLC7A0M8Q6 106 aa12.83□□□□□ -0.36
CHGA-206ENST00000556876 SMIM30A4D0T7 59 aa12.83□□□□□ -0.36
CHGA-206ENST00000556876 SULT1C2O00338 296 aa12.83□□□□□ -0.36
CHGA-206ENST00000556876 TSPAN4O14817 238 aa12.83□□□□□ -0.36
CHGA-206ENST00000556876 TNFSF12O43508 249 aa12.83□□□□□ -0.36
CHGA-206ENST00000556876 SCAF4O95104 1147 aaKnown RBP12.83□□□□□ -0.36
CHGA-206ENST00000556876 TRAPPC2P0DI81 140 aa12.83□□□□□ -0.36
CHGA-206ENST00000556876 TRAPPC2BP0DI82 140 aa12.83□□□□□ -0.36
CHGA-206ENST00000556876 GPR183P32249 361 aa12.83□□□□□ -0.36
CHGA-206ENST00000556876 SDC2P34741 201 aa12.83□□□□□ -0.36
CHGA-206ENST00000556876 HERV-K104P61576 105 aa12.83□□□□□ -0.36
CHGA-206ENST00000556876 BTNL8Q6UX41 500 aa12.83□□□□□ -0.36
CHGA-206ENST00000556876 CMTM1Q8IZ96 169 aa12.83□□□□□ -0.36
CHGA-206ENST00000556876 KIR2DL5AQ8N109 375 aa12.83□□□□□ -0.36
CHGA-206ENST00000556876 GDPD1Q8N9F7 314 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms