RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 LSM5Q9Y4Y9 91 aaKnown RBP7.37□□□□□ -1.23
ACTN1-218ENST00000556343 TEX15Q9BXT5 2789 aa7.37□□□□□ -1.23
ACTN1-218ENST00000556343 HIVEP2P31629 2446 aa7.36□□□□□ -1.23
ACTN1-218ENST00000556343 NAV3Q8IVL0 2385 aa7.36□□□□□ -1.23
ACTN1-218ENST00000556343 MPTX1A8MV57 137 aa7.36□□□□□ -1.23
ACTN1-218ENST00000556343 E5RGE8 158 aa7.36□□□□□ -1.23
ACTN1-218ENST00000556343 SYNGR2O43760 224 aa7.36□□□□□ -1.23
ACTN1-218ENST00000556343 TSPAN9O75954 239 aa7.36□□□□□ -1.23
ACTN1-218ENST00000556343 SCAF4O95104 1147 aaKnown RBP7.36□□□□□ -1.23
ACTN1-218ENST00000556343 RPL27AP46776 148 aaKnown RBP7.36□□□□□ -1.23
ACTN1-218ENST00000556343 HOXA1P49639 335 aaPredicted RBP7.36□□□□□ -1.23
ACTN1-218ENST00000556343 SUB1P53999 127 aaKnown RBP eCLIP7.36□□□□□ -1.23
ACTN1-218ENST00000556343 ATP5IP56385 69 aaPredicted RBP7.36□□□□□ -1.23
ACTN1-218ENST00000556343 TAS2R30P59541 319 aa7.36□□□□□ -1.23
ACTN1-218ENST00000556343 OR2B8PP59922 312 aa7.36□□□□□ -1.23
ACTN1-218ENST00000556343 GNB1P62873 340 aa7.36□□□□□ -1.23
ACTN1-218ENST00000556343 TNFRSF9Q07011 255 aa7.36□□□□□ -1.23
ACTN1-218ENST00000556343 TNXAQ16473 311 aa7.36□□□□□ -1.23
ACTN1-218ENST00000556343 LRRC37A5PQ49AS3 106 aa7.36□□□□□ -1.23
ACTN1-218ENST00000556343 AARDQ4LEZ3 155 aa7.36□□□□□ -1.23
ACTN1-218ENST00000556343 PRSS54Q6PEW0 395 aa7.36□□□□□ -1.23
ACTN1-218ENST00000556343 ZNF562Q6V9R5 426 aa7.36□□□□□ -1.23
ACTN1-218ENST00000556343 Q6ZRM9 215 aa7.36□□□□□ -1.23
ACTN1-218ENST00000556343 SIGLECL1Q8N7X8 197 aa7.36□□□□□ -1.23
ACTN1-218ENST00000556343 PIFOQ8TCI5 191 aa7.36□□□□□ -1.23
ACTN1-218ENST00000556343 ST6GAL2Q96JF0 529 aa7.36□□□□□ -1.23
ACTN1-218ENST00000556343 HYLS1Q96M11 299 aa7.36□□□□□ -1.23
ACTN1-218ENST00000556343 SMR3AQ99954 134 aa7.36□□□□□ -1.23
ACTN1-218ENST00000556343 SRSF8Q9BRL6 282 aaKnown RBP7.36□□□□□ -1.23
ACTN1-218ENST00000556343 HINT2Q9BX68 163 aa7.36□□□□□ -1.23
ACTN1-218ENST00000556343 ZNF430Q9H8G1 570 aaPredicted RBP7.36□□□□□ -1.23
ACTN1-218ENST00000556343 PLEKHA3Q9HB20 300 aa7.36□□□□□ -1.23
ACTN1-218ENST00000556343 HEYLQ9NQ87 328 aaPredicted RBP7.36□□□□□ -1.23
ACTN1-218ENST00000556343 PLSCR3Q9NRY6 295 aa7.36□□□□□ -1.23
ACTN1-218ENST00000556343 HSPB7Q9UBY9 170 aa7.36□□□□□ -1.23
ACTN1-218ENST00000556343 VPREB3Q9UKI3 123 aa7.36□□□□□ -1.23
ACTN1-218ENST00000556343 NSG2Q9Y328 171 aa7.36□□□□□ -1.23
ACTN1-218ENST00000556343 TEX50A0A1B0GTY4 177 aa7.35□□□□□ -1.23
ACTN1-218ENST00000556343 MDFIC2A0A1B0GVS7 189 aa7.35□□□□□ -1.23
ACTN1-218ENST00000556343 K7EPK0 472 aa7.35□□□□□ -1.23
ACTN1-218ENST00000556343 CYB5BO43169 146 aa7.35□□□□□ -1.23
ACTN1-218ENST00000556343 KCNAB3O43448 404 aa7.35□□□□□ -1.23
ACTN1-218ENST00000556343 CHST1O43916 411 aa7.35□□□□□ -1.23
ACTN1-218ENST00000556343 SSSCA1O60232 199 aa7.35□□□□□ -1.23
ACTN1-218ENST00000556343 DEDDO75618 318 aa7.35□□□□□ -1.23
ACTN1-218ENST00000556343 MPC2O95563 127 aa7.35□□□□□ -1.23
ACTN1-218ENST00000556343 CA2P00918 260 aa7.35□□□□□ -1.23
ACTN1-218ENST00000556343 HLA-DRB1P01911 266 aa7.35□□□□□ -1.23
ACTN1-218ENST00000556343 MBPP02686 304 aaPredicted RBP7.35□□□□□ -1.23
ACTN1-218ENST00000556343 C1QBP02746 253 aa7.35□□□□□ -1.23
ACTN1-218ENST00000556343 SLC25A4P12235 298 aa7.35□□□□□ -1.23
ACTN1-218ENST00000556343 CNTFRP26992 372 aa7.35□□□□□ -1.23
ACTN1-218ENST00000556343 SNCAP37840 140 aa7.35□□□□□ -1.23
ACTN1-218ENST00000556343 COMPP49747 757 aaPredicted RBP7.35□□□□□ -1.23
ACTN1-218ENST00000556343 PRCDQ00LT1 54 aa7.35□□□□□ -1.23
ACTN1-218ENST00000556343 TMEM267Q0VDI3 215 aaPredicted RBP7.35□□□□□ -1.23
ACTN1-218ENST00000556343 IL15RAQ13261 267 aa7.35□□□□□ -1.23
ACTN1-218ENST00000556343 RAB32Q13637 225 aa7.35□□□□□ -1.23
ACTN1-218ENST00000556343 FXYD3Q14802 87 aa7.35□□□□□ -1.23
ACTN1-218ENST00000556343 IZUMO4Q1ZYL8 232 aa7.35□□□□□ -1.23
ACTN1-218ENST00000556343 ZFP69Q49AA0 526 aa7.35□□□□□ -1.23
ACTN1-218ENST00000556343 PDLIM3Q53GG5 364 aaPredicted RBP7.35□□□□□ -1.23
ACTN1-218ENST00000556343 CXorf66Q5JRM2 361 aaPredicted RBP7.35□□□□□ -1.23
ACTN1-218ENST00000556343 C11orf87Q6NUJ2 197 aa7.35□□□□□ -1.23
ACTN1-218ENST00000556343 FAM71E2Q8N5Q1 922 aa7.35□□□□□ -1.23
ACTN1-218ENST00000556343 Q8N9W7 124 aa7.35□□□□□ -1.23
ACTN1-218ENST00000556343 INO80EQ8NBZ0 244 aaPredicted RBP7.35□□□□□ -1.23
ACTN1-218ENST00000556343 DTD1Q8TEA8 209 aa7.35□□□□□ -1.23
ACTN1-218ENST00000556343 ABHD5Q8WTS1 349 aa7.35□□□□□ -1.23
ACTN1-218ENST00000556343 TMEM68Q96MH6 324 aa7.35□□□□□ -1.23
ACTN1-218ENST00000556343 NEURL2Q9BR09 285 aa7.35□□□□□ -1.23
ACTN1-218ENST00000556343 SLC25A31Q9H0C2 315 aa7.35□□□□□ -1.23
ACTN1-218ENST00000556343 RBKSQ9H477 322 aa7.35□□□□□ -1.23
ACTN1-218ENST00000556343 ZC4H2Q9NQZ6 224 aa7.35□□□□□ -1.23
ACTN1-218ENST00000556343 SOX21Q9Y651 276 aaPredicted RBP7.35□□□□□ -1.23
ACTN1-218ENST00000556343 U3KQ87 197 aa7.35□□□□□ -1.23
ACTN1-218ENST00000556343 ZNF469Q96JG9 3925 aaPredicted RBP7.35□□□□□ -1.23
ACTN1-218ENST00000556343 ZANQ9Y493 2812 aa7.34□□□□□ -1.23
ACTN1-218ENST00000556343 OTOGQ6ZRI0 2925 aa7.34□□□□□ -1.23
ACTN1-218ENST00000556343 FXYD6-FXYD2A0A087WZ82 144 aa7.34□□□□□ -1.23
ACTN1-218ENST00000556343 TRAV3A0A0B4J244 114 aa7.34□□□□□ -1.23
ACTN1-218ENST00000556343 HOXA3O43365 443 aaPredicted RBP7.34□□□□□ -1.23
ACTN1-218ENST00000556343 IGHV4-59P01825 116 aa7.34□□□□□ -1.23
ACTN1-218ENST00000556343 CRYBA1P05813 215 aa7.34□□□□□ -1.23
ACTN1-218ENST00000556343 C4BPBP20851 252 aa7.34□□□□□ -1.23
ACTN1-218ENST00000556343 P2RY1P47900 373 aa7.34□□□□□ -1.23
ACTN1-218ENST00000556343 POLR2GP62487 172 aaKnown RBP eCLIP7.34□□□□□ -1.23
ACTN1-218ENST00000556343 RAB11AP62491 216 aa7.34□□□□□ -1.23
ACTN1-218ENST00000556343 ARSJQ5FYB0 599 aaPredicted RBP7.34□□□□□ -1.23
ACTN1-218ENST00000556343 C9orf152Q5JTZ5 239 aa7.34□□□□□ -1.23
ACTN1-218ENST00000556343 ZNF546Q86UE3 836 aa7.34□□□□□ -1.23
ACTN1-218ENST00000556343 TMEM219Q86XT9 240 aa7.34□□□□□ -1.23
ACTN1-218ENST00000556343 C5orf56Q8N8D9 126 aa7.34□□□□□ -1.23
ACTN1-218ENST00000556343 OR1L6Q8NGR2 347 aa7.34□□□□□ -1.23
ACTN1-218ENST00000556343 DCUN1D4Q92564 292 aa7.34□□□□□ -1.23
ACTN1-218ENST00000556343 ARPC1AQ92747 370 aa7.34□□□□□ -1.23
ACTN1-218ENST00000556343 WDR89Q96FK6 387 aaPredicted RBP7.34□□□□□ -1.23
ACTN1-218ENST00000556343 SMIM8Q96KF7 97 aa7.34□□□□□ -1.23
ACTN1-218ENST00000556343 ZNF48Q96MX3 618 aaPredicted RBP7.34□□□□□ -1.23
ACTN1-218ENST00000556343 PRSS22Q9GZN4 317 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms