RNA–Protein interactions for RNA: ENST00000556164.5

PRKCH-220, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 429 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-220ENST00000556164 PLECQ15149 4684 aaKnown RBP4.4□□□□□ -1.7
PRKCH-220ENST00000556164 LINC00473A8K010 186 aa4.4□□□□□ -1.71
PRKCH-220ENST00000556164 H0YJW9 148 aa4.4□□□□□ -1.71
PRKCH-220ENST00000556164 H3BTX0 84 aa4.4□□□□□ -1.71
PRKCH-220ENST00000556164 H3BUA1 57 aa4.4□□□□□ -1.71
PRKCH-220ENST00000556164 EI24O14681 340 aa4.4□□□□□ -1.71
PRKCH-220ENST00000556164 RAB29O14966 203 aa4.4□□□□□ -1.71
PRKCH-220ENST00000556164 SLC22A1O15245 554 aa4.4□□□□□ -1.71
PRKCH-220ENST00000556164 ATP8B1O43520 1251 aa4.4□□□□□ -1.71
PRKCH-220ENST00000556164 SC5DO75845 299 aa4.4□□□□□ -1.71
PRKCH-220ENST00000556164 RBBP9O75884 186 aa4.4□□□□□ -1.71
PRKCH-220ENST00000556164 CNIH1O95406 144 aa4.4□□□□□ -1.71
PRKCH-220ENST00000556164 TRBV12-3P01733 135 aa4.4□□□□□ -1.71
PRKCH-220ENST00000556164 STAG3L2P0CL84 134 aa4.4□□□□□ -1.71
PRKCH-220ENST00000556164 CT45A6P0DMU7 189 aa4.4□□□□□ -1.71
PRKCH-220ENST00000556164 CT45A5P0DMU8 189 aa4.4□□□□□ -1.71
PRKCH-220ENST00000556164 CT45A7P0DMV0 189 aa4.4□□□□□ -1.71
PRKCH-220ENST00000556164 MGMTP16455 207 aa4.4□□□□□ -1.71
PRKCH-220ENST00000556164 PI3P19957 117 aa4.4□□□□□ -1.71
PRKCH-220ENST00000556164 FUT3P21217 361 aa4.4□□□□□ -1.71
PRKCH-220ENST00000556164 SEC61BP60468 96 aaKnown RBP4.4□□□□□ -1.71
PRKCH-220ENST00000556164 FXYD3Q14802 87 aa4.4□□□□□ -1.71
PRKCH-220ENST00000556164 USF2Q15853 346 aaPredicted RBP4.4□□□□□ -1.71
PRKCH-220ENST00000556164 ZNF124Q15973 351 aa4.4□□□□□ -1.71
PRKCH-220ENST00000556164 RPEL1Q2QD12 228 aa4.4□□□□□ -1.71
PRKCH-220ENST00000556164 MOGAT2Q3SYC2 334 aa4.4□□□□□ -1.71
PRKCH-220ENST00000556164 DMKNQ6E0U4 476 aaPredicted RBP4.4□□□□□ -1.71
PRKCH-220ENST00000556164 RPL22L1Q6P5R6 122 aaKnown RBP4.4□□□□□ -1.71
PRKCH-220ENST00000556164 ZNF562Q6V9R5 426 aa4.4□□□□□ -1.71
PRKCH-220ENST00000556164 LINC00322Q6ZN03 302 aaPredicted RBP4.4□□□□□ -1.71
PRKCH-220ENST00000556164 SSX9Q7RTT3 188 aa4.4□□□□□ -1.71
PRKCH-220ENST00000556164 ZNF554Q86TJ5 538 aa4.4□□□□□ -1.71
PRKCH-220ENST00000556164 MMD2Q8IY49 270 aa4.4□□□□□ -1.71
PRKCH-220ENST00000556164 DEFB125Q8N687 156 aa4.4□□□□□ -1.71
PRKCH-220ENST00000556164 OR52I1Q8NGK6 324 aa4.4□□□□□ -1.71
PRKCH-220ENST00000556164 TMEM37Q8WXS4 190 aa4.4□□□□□ -1.71
PRKCH-220ENST00000556164 GHSRQ92847 366 aa4.4□□□□□ -1.71
PRKCH-220ENST00000556164 ABHD14BQ96IU4 210 aa4.4□□□□□ -1.71
PRKCH-220ENST00000556164 NEURL2Q9BR09 285 aa4.4□□□□□ -1.71
PRKCH-220ENST00000556164 ST6GALNAC5Q9BVH7 336 aa4.4□□□□□ -1.71
PRKCH-220ENST00000556164 FUNDC2Q9BWH2 189 aa4.4□□□□□ -1.71
PRKCH-220ENST00000556164 WFDC10AQ9H1F0 79 aa4.4□□□□□ -1.71
PRKCH-220ENST00000556164 RIMS4Q9H426 269 aaPredicted RBP4.4□□□□□ -1.71
PRKCH-220ENST00000556164 ABRACLQ9P1F3 81 aa4.4□□□□□ -1.71
PRKCH-220ENST00000556164 CKLFQ9UBR5 152 aa4.4□□□□□ -1.71
PRKCH-220ENST00000556164 TBC1D24Q9ULP9 559 aa4.4□□□□□ -1.71
PRKCH-220ENST00000556164 TMED3Q9Y3Q3 217 aa4.4□□□□□ -1.71
PRKCH-220ENST00000556164 GMPPBQ9Y5P6 360 aa4.4□□□□□ -1.71
PRKCH-220ENST00000556164 FRAS1Q86XX4 4008 aa4.39□□□□□ -1.71
PRKCH-220ENST00000556164 TRAV8-7A0A075B6U6 113 aa4.39□□□□□ -1.71
PRKCH-220ENST00000556164 PDCD6O75340 191 aa4.39□□□□□ -1.71
PRKCH-220ENST00000556164 GPX5O75715 221 aa4.39□□□□□ -1.71
PRKCH-220ENST00000556164 OR2A4O95047 310 aa4.39□□□□□ -1.71
PRKCH-220ENST00000556164 ALPLP05186 524 aa4.39□□□□□ -1.71
PRKCH-220ENST00000556164 GLAP06280 429 aa4.39□□□□□ -1.71
PRKCH-220ENST00000556164 CD7P09564 240 aa4.39□□□□□ -1.71
PRKCH-220ENST00000556164 LIMS3P0CW19 117 aa4.39□□□□□ -1.71
PRKCH-220ENST00000556164 LIMS4P0CW20 117 aa4.39□□□□□ -1.71
PRKCH-220ENST00000556164 IGFBP3P17936 291 aaPredicted RBP4.39□□□□□ -1.71
PRKCH-220ENST00000556164 AADACP22760 399 aa4.39□□□□□ -1.71
PRKCH-220ENST00000556164 TSPAN5P62079 268 aa4.39□□□□□ -1.71
PRKCH-220ENST00000556164 EXOSC2Q13868 293 aaKnown RBP4.39□□□□□ -1.71
PRKCH-220ENST00000556164 MEF2DQ14814 521 aa4.39□□□□□ -1.71
PRKCH-220ENST00000556164 HMGN3Q15651 99 aa4.39□□□□□ -1.71
PRKCH-220ENST00000556164 GUCA2BQ16661 112 aa4.39□□□□□ -1.71
PRKCH-220ENST00000556164 CCDC58Q4VC31 144 aa4.39□□□□□ -1.71
PRKCH-220ENST00000556164 LY6G6FQ5SQ64 297 aa4.39□□□□□ -1.71
PRKCH-220ENST00000556164 OR2G6Q5TZ20 316 aa4.39□□□□□ -1.71
PRKCH-220ENST00000556164 C1orf146Q5VVC0 180 aa4.39□□□□□ -1.71
PRKCH-220ENST00000556164 ZNF343Q6P1L6 599 aa4.39□□□□□ -1.71
PRKCH-220ENST00000556164 Q6ZSN1 163 aa4.39□□□□□ -1.71
PRKCH-220ENST00000556164 OR2K2Q8NGT1 345 aa4.39□□□□□ -1.71
PRKCH-220ENST00000556164 DYNLRB2Q8TF09 96 aa4.39□□□□□ -1.71
PRKCH-220ENST00000556164 SMIM19Q96E16 107 aa4.39□□□□□ -1.71
PRKCH-220ENST00000556164 ZNF479Q96JC4 524 aa4.39□□□□□ -1.71
PRKCH-220ENST00000556164 Q96MT0 163 aa4.39□□□□□ -1.71
PRKCH-220ENST00000556164 TSNAXQ99598 290 aaKnown RBP4.39□□□□□ -1.71
PRKCH-220ENST00000556164 RNF5Q99942 180 aa4.39□□□□□ -1.71
PRKCH-220ENST00000556164 PARP12Q9H0J9 701 aaKnown RBP4.39□□□□□ -1.71
PRKCH-220ENST00000556164 TREM1Q9NP99 234 aa4.39□□□□□ -1.71
PRKCH-220ENST00000556164 COA4Q9NYJ1 87 aa4.39□□□□□ -1.71
PRKCH-220ENST00000556164 SIGLEC8Q9NYZ4 499 aa4.39□□□□□ -1.71
PRKCH-220ENST00000556164 LRRC42Q9Y546 428 aa4.39□□□□□ -1.71
PRKCH-220ENST00000556164 TRBV5-5A0A0J9YX44 114 aa4.38□□□□□ -1.71
PRKCH-220ENST00000556164 GAGE12JA6NER3 117 aa4.38□□□□□ -1.71
PRKCH-220ENST00000556164 NUPR2A6NF83 97 aa4.38□□□□□ -1.71
PRKCH-220ENST00000556164 OR11H12B2RN74 326 aa4.38□□□□□ -1.71
PRKCH-220ENST00000556164 H3BNX3 289 aa4.38□□□□□ -1.71
PRKCH-220ENST00000556164 DYNC1I1O14576 645 aa4.38□□□□□ -1.71
PRKCH-220ENST00000556164 AIREO43918 545 aa4.38□□□□□ -1.71
PRKCH-220ENST00000556164 APOA2P02652 100 aa4.38□□□□□ -1.71
PRKCH-220ENST00000556164 IGKV1-16P04430 117 aa4.38□□□□□ -1.71
PRKCH-220ENST00000556164 APELAP0DMC3 54 aa4.38□□□□□ -1.71
PRKCH-220ENST00000556164 NKX2-1P43699 371 aaPredicted RBP4.38□□□□□ -1.71
PRKCH-220ENST00000556164 LGALS7P47929 136 aa4.38□□□□□ -1.71
PRKCH-220ENST00000556164 RAB11AP62491 216 aa4.38□□□□□ -1.71
PRKCH-220ENST00000556164 RAB11BQ15907 218 aa4.38□□□□□ -1.71
PRKCH-220ENST00000556164 CTF1Q16619 201 aa4.38□□□□□ -1.71
PRKCH-220ENST00000556164 Q499Y3 187 aa4.38□□□□□ -1.71
PRKCH-220ENST00000556164 FAM122CQ6P4D5 195 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms