RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 ATP6V0E1O15342 81 aa6.03□□□□□ -1.44
TDP1-214ENST00000556063 IFNA21P01568 189 aa6.03□□□□□ -1.44
TDP1-214ENST00000556063 IGKV1-39P01597 117 aa6.03□□□□□ -1.44
TDP1-214ENST00000556063 IGKV1D-39P04432 117 aa6.03□□□□□ -1.44
TDP1-214ENST00000556063 IL5P05113 134 aa6.03□□□□□ -1.44
TDP1-214ENST00000556063 COMPP49747 757 aaPredicted RBP6.03□□□□□ -1.44
TDP1-214ENST00000556063 MECP2P51608 486 aaKnown RBP6.03□□□□□ -1.44
TDP1-214ENST00000556063 PJVKQ0ZLH3 352 aa6.03□□□□□ -1.44
TDP1-214ENST00000556063 AKIRIN2Q53H80 203 aa6.03□□□□□ -1.44
TDP1-214ENST00000556063 AWAT1Q58HT5 328 aa6.03□□□□□ -1.44
TDP1-214ENST00000556063 UNQ5815/PRO19632Q6UWF5 114 aa6.03□□□□□ -1.44
TDP1-214ENST00000556063 Q6ZS46 218 aa6.03□□□□□ -1.44
TDP1-214ENST00000556063 SELENOHQ8IZQ5 122 aaKnown RBP6.03□□□□□ -1.44
TDP1-214ENST00000556063 STPG2Q8N412 459 aa6.03□□□□□ -1.44
TDP1-214ENST00000556063 KLHDC1Q8N7A1 406 aa6.03□□□□□ -1.44
TDP1-214ENST00000556063 SLC35G3Q8N808 338 aa6.03□□□□□ -1.44
TDP1-214ENST00000556063 C3orf56Q8N813 242 aa6.03□□□□□ -1.44
TDP1-214ENST00000556063 LRTM2Q8N967 370 aa6.03□□□□□ -1.44
TDP1-214ENST00000556063 OR4X2Q8NGF9 303 aa6.03□□□□□ -1.44
TDP1-214ENST00000556063 OR1L8Q8NGR8 309 aa6.03□□□□□ -1.44
TDP1-214ENST00000556063 OR5B3Q8NH48 314 aa6.03□□□□□ -1.44
TDP1-214ENST00000556063 SGMS2Q8NHU3 365 aa6.03□□□□□ -1.44
TDP1-214ENST00000556063 ZNF431Q8TF32 576 aaPredicted RBP6.03□□□□□ -1.44
TDP1-214ENST00000556063 SRSF12Q8WXF0 261 aaKnown RBP6.03□□□□□ -1.44
TDP1-214ENST00000556063 SRSF8Q9BRL6 282 aaKnown RBP6.03□□□□□ -1.44
TDP1-214ENST00000556063 MARVELD1Q9BSK0 173 aa6.03□□□□□ -1.44
TDP1-214ENST00000556063 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.03□□□□□ -1.44
TDP1-214ENST00000556063 SERTAD4Q9NUC0 356 aa6.03□□□□□ -1.44
TDP1-214ENST00000556063 ZNF257Q9Y2Q1 563 aa6.03□□□□□ -1.44
TDP1-214ENST00000556063 TMED3Q9Y3Q3 217 aa6.03□□□□□ -1.44
TDP1-214ENST00000556063 A0A1B0GU03 582 aa6.02□□□□□ -1.45
TDP1-214ENST00000556063 MSGN1A6NI15 193 aa6.02□□□□□ -1.45
TDP1-214ENST00000556063 C15orf61A6NNL5 157 aa6.02□□□□□ -1.45
TDP1-214ENST00000556063 CYB5BO43169 146 aa6.02□□□□□ -1.45
TDP1-214ENST00000556063 IGKV1-5P01602 117 aa6.02□□□□□ -1.45
TDP1-214ENST00000556063 IL6RP08887 468 aaPredicted RBP6.02□□□□□ -1.45
TDP1-214ENST00000556063 TRAPPC2P0DI81 140 aa6.02□□□□□ -1.45
TDP1-214ENST00000556063 TRAPPC2BP0DI82 140 aa6.02□□□□□ -1.45
TDP1-214ENST00000556063 SULT1A3P0DMM9 295 aa6.02□□□□□ -1.45
TDP1-214ENST00000556063 SULT1A4P0DMN0 295 aa6.02□□□□□ -1.45
TDP1-214ENST00000556063 CRIP2P52943 208 aaPredicted RBP6.02□□□□□ -1.45
TDP1-214ENST00000556063 PROK1P58294 105 aa6.02□□□□□ -1.45
TDP1-214ENST00000556063 ECSCRQ19T08 205 aa6.02□□□□□ -1.45
TDP1-214ENST00000556063 TMEM95Q3KNT9 176 aa6.02□□□□□ -1.45
TDP1-214ENST00000556063 TEX38Q6PEX7 206 aa6.02□□□□□ -1.45
TDP1-214ENST00000556063 C12orf45Q8N5I9 185 aaPredicted RBP6.02□□□□□ -1.45
TDP1-214ENST00000556063 LFNGQ8NES3 379 aa6.02□□□□□ -1.45
TDP1-214ENST00000556063 OR5AU1Q8NGC0 362 aa6.02□□□□□ -1.45
TDP1-214ENST00000556063 OR5M8Q8NGP6 311 aa6.02□□□□□ -1.45
TDP1-214ENST00000556063 LHFPL5Q8TAF8 219 aa6.02□□□□□ -1.45
TDP1-214ENST00000556063 MITD1Q8WV92 249 aa6.02□□□□□ -1.45
TDP1-214ENST00000556063 FYTTD1Q96QD9 318 aaKnown RBP6.02□□□□□ -1.45
TDP1-214ENST00000556063 HINT2Q9BX68 163 aa6.02□□□□□ -1.45
TDP1-214ENST00000556063 QTRT1Q9BXR0 403 aaKnown RBP6.02□□□□□ -1.45
TDP1-214ENST00000556063 WNT10AQ9GZT5 417 aa6.02□□□□□ -1.45
TDP1-214ENST00000556063 ENY2Q9NPA8 101 aa6.02□□□□□ -1.45
TDP1-214ENST00000556063 TMEM14BQ9NUH8 114 aa6.02□□□□□ -1.45
TDP1-214ENST00000556063 FOXA2Q9Y261 457 aaPredicted RBP6.02□□□□□ -1.45
TDP1-214ENST00000556063 OR51B2Q9Y5P1 312 aa6.02□□□□□ -1.45
TDP1-214ENST00000556063 WSB1Q9Y6I7 421 aa6.02□□□□□ -1.45
TDP1-214ENST00000556063 TRAV3A0A0B4J244 114 aa6.01□□□□□ -1.45
TDP1-214ENST00000556063 TEX50A0A1B0GTY4 177 aa6.01□□□□□ -1.45
TDP1-214ENST00000556063 A0A1W2PN81 502 aa6.01□□□□□ -1.45
TDP1-214ENST00000556063 LINC01548A6NM66 108 aa6.01□□□□□ -1.45
TDP1-214ENST00000556063 SNRPGP15A8MWD9 76 aa6.01□□□□□ -1.45
TDP1-214ENST00000556063 IFNA17P01571 189 aa6.01□□□□□ -1.45
TDP1-214ENST00000556063 OPN1MWP04001 364 aa6.01□□□□□ -1.45
TDP1-214ENST00000556063 ELANEP08246 267 aa6.01□□□□□ -1.45
TDP1-214ENST00000556063 HOXB5P09067 269 aa6.01□□□□□ -1.45
TDP1-214ENST00000556063 OR9G9P0C7N8 305 aa6.01□□□□□ -1.45
TDP1-214ENST00000556063 P0C879 139 aa6.01□□□□□ -1.45
TDP1-214ENST00000556063 OPN1MW2P0DN77 364 aa6.01□□□□□ -1.45
TDP1-214ENST00000556063 OPN1MW3P0DN78 364 aa6.01□□□□□ -1.45
TDP1-214ENST00000556063 SLC25A6P12236 298 aa6.01□□□□□ -1.45
TDP1-214ENST00000556063 CHRNA7P36544 502 aa6.01□□□□□ -1.45
TDP1-214ENST00000556063 OR2B8PP59922 312 aa6.01□□□□□ -1.45
TDP1-214ENST00000556063 HSPE1P61604 102 aaKnown RBP6.01□□□□□ -1.45
TDP1-214ENST00000556063 NDPQ00604 133 aa6.01□□□□□ -1.45
TDP1-214ENST00000556063 FOXE3Q13461 319 aa6.01□□□□□ -1.45
TDP1-214ENST00000556063 SMCO1Q147U7 214 aa6.01□□□□□ -1.45
TDP1-214ENST00000556063 MRGPRG-AS1Q2M3A8 158 aa6.01□□□□□ -1.45
TDP1-214ENST00000556063 ANKRD55Q3KP44 614 aa6.01□□□□□ -1.45
TDP1-214ENST00000556063 CXorf66Q5JRM2 361 aaPredicted RBP6.01□□□□□ -1.45
TDP1-214ENST00000556063 TMEM65Q6PI78 240 aa6.01□□□□□ -1.45
TDP1-214ENST00000556063 LYZL2Q7Z4W2 148 aa6.01□□□□□ -1.45
TDP1-214ENST00000556063 ZNF429Q86V71 674 aa6.01□□□□□ -1.45
TDP1-214ENST00000556063 MINDY2Q8NBR6 621 aa6.01□□□□□ -1.45
TDP1-214ENST00000556063 UXS1Q8NBZ7 420 aa6.01□□□□□ -1.45
TDP1-214ENST00000556063 OR52E5Q8NH55 327 aa6.01□□□□□ -1.45
TDP1-214ENST00000556063 OR1S1Q8NH92 325 aa6.01□□□□□ -1.45
TDP1-214ENST00000556063 TAF15Q92804 592 aaKnown RBP eCLIP6.01□□□□□ -1.45
TDP1-214ENST00000556063 GPR146Q96CH1 333 aa6.01□□□□□ -1.45
TDP1-214ENST00000556063 NOL4LQ96MY1 436 aaPredicted RBP6.01□□□□□ -1.45
TDP1-214ENST00000556063 SEC22CQ9BRL7 303 aa6.01□□□□□ -1.45
TDP1-214ENST00000556063 FAM103A1Q9BTL3 118 aaKnown RBP6.01□□□□□ -1.45
TDP1-214ENST00000556063 PLEKHA3Q9HB20 300 aa6.01□□□□□ -1.45
TDP1-214ENST00000556063 COA4Q9NYJ1 87 aa6.01□□□□□ -1.45
TDP1-214ENST00000556063 PRR13Q9NZ81 148 aa6.01□□□□□ -1.45
TDP1-214ENST00000556063 CACNG5Q9UF02 275 aa6.01□□□□□ -1.45
TDP1-214ENST00000556063 LINC00527Q9UJ94 153 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms